Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g033690 Solanum pennellii HOM05D019957 ORTHO05D000707 1.5e-52 209.1 102 100.0
Solyc03g114620.1 Solanum lycopersicum HOM05D019957 ORTHO05D000707 5.9e-52 207.2 102 99.0
PGSC0003DMG400024515 Solanum tuberosum HOM05D019957 ORTHO05D000707 2.7e-49 198.4 102 94.1
CAN.G982.28 Capsicum annuum HOM05D019957 ORTHO05D000707 1.9e-42 175.6 102 85.3
Peaxi162Scf00017g10317 Petunia axillaris HOM05D019957 ORTHO05D000707 5.2e-24 114.4 100 64.0
Nitab4.5_0002805g0170 Nicotiana tabacum HOM05D019957 ORTHO05D000707 7.8e-20 100.5 102 50.0
Aqoxy3G00596 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 1.1e-10 70.1 103 37.9
TAR374G1048 Trochodendron aralioides HOM05D000926 ORTHO05D000707 1.5e-10 69.7 106 40.6
Thecc.04G112900 Theobroma cacao HOM05D000926 ORTHO05D000707 2.5e-10 68.9 103 38.8
Hma1.2p1_0588F.1_g184540 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 4.3e-10 68.2 88 42.0
Sabra17G0090100 Salix brachista HOM05D000926 ORTHO05D000707 4.3e-10 68.2 94 44.7
Duzib138G1671 Durio zibethinus HOM05D000926 ORTHO05D000707 5.6e-10 67.8 93 41.9
Dinv34883 Davidia involucrata HOM05D000926 ORTHO05D000707 7.3e-10 67.4 94 42.6
Eucgr.J01435 Eucalyptus grandis HOM05D000926 ORTHO05D000707 7.3e-10 67.4 102 42.2
Potri.017G107300 Populus trichocarpa HOM05D000926 ORTHO05D000707 7.3e-10 67.4 99 37.4
CiPaw.03G077200 Carya illinoinensis HOM05D000926 ORTHO05D000707 9.5e-10 67.0 95 42.1
Lju361C12T10 Lonicera japonica HOM05D000926 ORTHO05D000707 9.5e-10 67.0 93 39.8
Eucgr.J01438 Eucalyptus grandis HOM05D000926 ORTHO05D000707 1.2e-09 66.6 102 44.1
Thecc.04G113000 Theobroma cacao HOM05D000926 ORTHO05D000707 1.2e-09 66.6 91 41.8
Sabra04G0073900 Salix brachista HOM05D000926 ORTHO05D000707 1.6e-09 66.2 90 41.1
Aqoxy3G00594 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 2.1e-09 65.9 94 39.4
Potri.017G107200 Populus trichocarpa HOM05D000926 ORTHO05D000707 2.8e-09 65.5 94 39.4
TPR.G3253 Trifolium pratense HOM05D000926 ORTHO05D000707 2.8e-09 65.5 96 37.5
Aa31LG9G16890 Aethionema arabicum HOM05D000926 ORTHO05D000707 3.6e-09 65.1 78 41.0
Glyma.18G277600 Glycine max HOM05D000926 ORTHO05D000707 3.6e-09 65.1 84 39.3
Manes.02G062600 Manihot esculenta HOM05D000926 ORTHO05D000707 4.7e-09 64.7 86 41.9
EL10Ac2g04400 Beta vulgaris HOM05D000926 ORTHO05D000707 6.2e-09 64.3 99 34.3
Eucgr.J01437 Eucalyptus grandis HOM05D000926 ORTHO05D000707 6.2e-09 64.3 102 41.2
Manes.02G062400 Manihot esculenta HOM05D000926 ORTHO05D000707 6.2e-09 64.3 87 43.7
Dinv38621 Davidia involucrata HOM05D000926 ORTHO05D000707 8.0e-09 63.9 92 46.7
ATR0691G108 Amborella trichopoda HOM05D000926 ORTHO05D000707 1.1e-08 63.5 93 33.3
Duzib084G1204 Durio zibethinus HOM05D000926 ORTHO05D000707 1.1e-08 63.5 89 41.6
CiPaw.03G080100 Carya illinoinensis HOM05D000926 ORTHO05D000707 1.4e-08 63.2 100 39.0
Duzib211G0100 Durio zibethinus HOM05D000926 ORTHO05D000707 1.4e-08 63.2 100 41.0
Hma1.2p1_0595F.1_g186210 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 1.4e-08 63.2 93 36.6
AUR62023120 Chenopodium quinoa HOM05D000926 ORTHO05D000707 1.8e-08 62.8 94 38.3
Nn3g17603 Nelumbo nucifera HOM05D000926 ORTHO05D000707 2.3e-08 62.4 94 42.6
DCAR_010193 Daucus carota HOM05D000926 ORTHO05D000707 3.1e-08 62.0 89 39.3
Glyma.08G254800 Glycine max HOM05D000926 ORTHO05D000707 3.1e-08 62.0 87 42.5
Haze_14349 Corylus avellana HOM05D000926 ORTHO05D000707 4.0e-08 61.6 93 38.7
Medtr0542s0020 Medicago truncatula HOM05D000926 ORTHO05D000707 4.0e-08 61.6 91 36.3
THA.LOC109116337 Tarenaya hassleriana HOM05D000926 ORTHO05D000707 4.0e-08 61.6 88 39.8
Eucgr.J01436 Eucalyptus grandis HOM05D000926 ORTHO05D000707 5.2e-08 61.2 102 40.2
Phvul.008G023400 Phaseolus vulgaris HOM05D000926 ORTHO05D000707 5.2e-08 61.2 101 36.6
MSTRG.2960 Avicennia marina HOM05D000926 ORTHO05D000707 6.8e-08 60.8 98 38.8
Oeu032853.1 Olea europaea HOM05D000926 ORTHO05D000707 6.8e-08 60.8 101 38.6
TAR629G1973 Trochodendron aralioides HOM05D000926 ORTHO05D000707 6.8e-08 60.8 90 41.1
CSS0045695 Camellia sinensis var. sinensis HOM05D000926 ORTHO05D000707 8.9e-08 60.5 84 41.7
Lalb_Chr10g0092481 Lupinus albus HOM05D000926 ORTHO05D000707 8.9e-08 60.5 96 37.5
Potri.004G108680 Populus trichocarpa HOM05D000926 ORTHO05D000707 8.9e-08 60.5 84 39.3
Aqoxy3G03797 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 1.2e-07 60.1 90 38.9
Sopen02g034220 Solanum pennellii HOM05D000926 ORTHO05D000707 1.2e-07 60.1 96 37.5
CsaV3_1G003190 Cucumis sativus L. HOM05D000926 ORTHO05D000707 1.5e-07 59.7 88 37.5
Medtr6g016480 Medicago truncatula HOM05D000926 ORTHO05D000707 1.5e-07 59.7 89 44.9
SalBow1G1369 Salvia bowleyana HOM05D000926 ORTHO05D000707 1.5e-07 59.7 84 40.5
Psat1g064600 Pisum sativum HOM05D000926 ORTHO05D000707 2.0e-07 59.3 89 41.6
Solyc02g089480.1 Solanum lycopersicum HOM05D000926 ORTHO05D000707 2.0e-07 59.3 96 36.5
Rhsim08G0078900 Rhododendron simsii HOM05D000926 ORTHO05D000707 2.6e-07 58.9 83 42.2
Aqoxy3G03796 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 3.4e-07 58.5 91 40.7
Cfa007731 Carpinus fangiana HOM05D000926 ORTHO05D000707 3.4e-07 58.5 80 38.8
CiPaw.03G080200 Carya illinoinensis HOM05D000926 ORTHO05D000707 3.4e-07 58.5 90 37.8
Gohir.D07G185000 Gossypium hirsutum HOM05D000926 ORTHO05D000707 3.4e-07 58.5 91 39.6
Gorai.001G205500 Gossypium raimondii HOM05D000926 ORTHO05D000707 3.4e-07 58.5 91 39.6
CiPaw.03G080300 Carya illinoinensis HOM05D000926 ORTHO05D000707 4.4e-07 58.2 90 40.0
Migut.K00874 Erythranthe guttata HOM05D000926 ORTHO05D000707 4.4e-07 58.2 81 38.3
Gohir.A07G178200 Gossypium hirsutum HOM05D000926 ORTHO05D000707 4.4e-07 58.2 91 39.6
Nitab4.5_0005612g0030 Nicotiana tabacum HOM05D000926 ORTHO05D000707 4.4e-07 58.2 92 38.0
CAN.G93.43 Capsicum annuum HOM05D000926 ORTHO05D000707 5.8e-07 57.8 96 34.4
Psat1g064720 Pisum sativum HOM05D000926 ORTHO05D000707 5.8e-07 57.8 89 38.2
Lj1g0009060 Lotus japonicus HOM05D000926 ORTHO05D000707 7.5e-07 57.4 82 36.6
Nitab4.5_0002171g0020 Nicotiana tabacum HOM05D000926 ORTHO05D000707 7.5e-07 57.4 88 35.2
Psat3g193960 Pisum sativum HOM05D000926 ORTHO05D000707 7.5e-07 57.4 84 36.9
CSS0017323 Camellia sinensis var. sinensis HOM05D000926 ORTHO05D000707 9.8e-07 57.0 86 41.9
COL.COLO4_33437 Corchorus olitorius HOM05D000926 ORTHO05D000707 9.8e-07 57.0 79 38.0
Thecc.03G112300 Theobroma cacao HOM05D000926 ORTHO05D000707 9.8e-07 57.0 83 42.2
HanXRQChr12g0380091 Helianthus annuus HOM05D000926 ORTHO05D000707 1.3e-06 56.6 90 38.9
Hma1.2p1_2231F.1_g317580 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 1.3e-06 56.6 87 36.8
MD09G1078900 Malus domestica HOM05D000926 ORTHO05D000707 1.3e-06 56.6 92 34.8
Atru.chr9.649 Acer truncatum HOM05D000926 ORTHO05D000707 1.7e-06 56.2 91 35.2
PGR042G1069 Punica granatum HOM05D000926 ORTHO05D000707 1.7e-06 56.2 86 39.5
Actinidia26283 Actinidia chinensis HOM05D000926 ORTHO05D000707 2.2e-06 55.8 94 37.2
ATR0580G037 Amborella trichopoda HOM05D000926 ORTHO05D000707 2.2e-06 55.8 95 36.8
MSTRG.2959 Avicennia marina HOM05D000926 ORTHO05D000707 2.2e-06 55.8 84 39.3
Cfa007730 Carpinus fangiana HOM05D000926 ORTHO05D000707 2.2e-06 55.8 98 37.8
Manes.01G106100 Manihot esculenta HOM05D000926 ORTHO05D000707 2.2e-06 55.8 84 39.3
Manes.05G115600 Manihot esculenta HOM05D000926 ORTHO05D000707 2.2e-06 55.8 96 34.4
Sc10g0000430 Simmondsia chinensis HOM05D000926 ORTHO05D000707 2.2e-06 55.8 80 41.2
PGSC0003DMG400001479 Solanum tuberosum HOM05D000926 ORTHO05D000707 2.2e-06 55.8 87 35.6
PGSC0003DMG400029541 Solanum tuberosum HOM05D000926 ORTHO05D000707 2.2e-06 55.8 87 35.6
Gohir.D03G099400 Gossypium hirsutum HOM05D000926 ORTHO05D000707 2.9e-06 55.5 89 37.1
Gorai.003G104400 Gossypium raimondii HOM05D000926 ORTHO05D000707 2.9e-06 55.5 89 37.1
Oeu032854.1 Olea europaea HOM05D000926 ORTHO05D000707 2.9e-06 55.5 82 41.5
Cfa007729 Carpinus fangiana HOM05D000926 ORTHO05D000707 3.7e-06 55.1 88 35.2
Manes.01G105900 Manihot esculenta HOM05D000926 ORTHO05D000707 3.7e-06 55.1 82 40.2
Ciclev10023021m.g Citrus clementina HOM05D000926 ORTHO05D000707 4.9e-06 54.7 83 39.8
Psat1g064800 Pisum sativum HOM05D000926 ORTHO05D000707 4.9e-06 54.7 88 37.5
TPR.G15947 Trifolium pratense HOM05D000926 ORTHO05D000707 4.9e-06 54.7 79 44.3
ClCG06G015310 Citrullus lanatus HOM05D000926 ORTHO05D000707 6.4e-06 54.3 85 35.3
Gohir.A03G072800 Gossypium hirsutum HOM05D000926 ORTHO05D000707 6.4e-06 54.3 89 37.1
Hma1.2p1_0588F.1_g184550 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 6.4e-06 54.3 84 36.9
Glyma.19G038700 Glycine max HOM05D000926 ORTHO05D000707 8.3e-06 53.9 79 43.0
Lalb_Chr10g0092471 Lupinus albus HOM05D000926 ORTHO05D000707 8.3e-06 53.9 86 37.2
Peaxi162Scf00479g00093 Petunia axillaris HOM05D000926 ORTHO05D000707 8.3e-06 53.9 116 33.6
Potri.004G108800 Populus trichocarpa HOM05D000926 ORTHO05D000707 8.3e-06 53.9 87 43.7
RcHm_v2.0_Chr2g0164151 Rosa chinensis HOM05D000926 ORTHO05D000707 8.3e-06 53.9 93 36.6


User provided reference genes

Program Settings