Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g033610 Solanum pennellii HOM05D006386 ORTHO05D007575 1.9e-133 479.2 247 100.0
Solyc03g114520.3 Solanum lycopersicum HOM05D006386 ORTHO05D007575 1.7e-129 466.1 247 98.0
PGSC0003DMG400024511 Solanum tuberosum HOM05D006386 ORTHO05D007575 6.3e-124 447.6 247 93.5
Nitab4.5_0000646g0180 Nicotiana tabacum HOM05D006386 ORTHO05D007575 6.1e-103 377.9 247 77.3
Nitab4.5_0004342g0080 Nicotiana tabacum HOM05D006386 ORTHO05D007575 9.1e-99 364.0 247 74.9
CSS0007083 Camellia sinensis var. sinensis HOM05D006386 ORTHO05D007575 1.0e-70 270.8 242 57.4
Dinv36853 Davidia involucrata HOM05D006386 ORTHO05D007575 1.8e-70 270.0 244 56.1
Actinidia36923 Actinidia chinensis HOM05D006386 ORTHO05D007575 3.7e-68 262.3 244 53.3
Ciclev10021913m.g Citrus clementina HOM05D006386 ORTHO05D007575 1.1e-67 260.8 244 54.9
COL.COLO4_08656 Corchorus olitorius HOM05D006386 ORTHO05D007575 1.9e-67 260.0 244 52.5
Lj9A435T83 Lonicera japonica HOM05D006386 ORTHO05D007575 2.0e-66 256.5 237 58.2
GSVIVG01008195001 Vitis vinifera HOM05D006386 ORTHO05D007575 2.7e-66 256.1 244 53.7
Cc04_g07860 Coffea canephora HOM05D006386 ORTHO05D007575 1.0e-65 254.2 243 52.3
Atru.chr9.671 Acer truncatum HOM05D006386 ORTHO05D007575 3.9e-65 252.3 243 52.7
Duzib068G0691 Durio zibethinus HOM05D006386 ORTHO05D007575 7.3e-64 248.1 244 51.6
Thecc.03G113300 Theobroma cacao HOM05D006386 ORTHO05D007575 3.6e-63 245.7 244 51.6
Nitab4.5_0005402g0030 Nicotiana tabacum HOM05D002295 ORTHO05D007575 1.1e-62 244.2 225 61.3
Hund02537 Selenicereus undatus HOM05D006386 ORTHO05D007575 2.3e-62 243.0 241 49.8
Gorai.007G040700 Gossypium raimondii HOM05D006386 ORTHO05D007575 6.8e-62 241.5 244 50.8
Hma1.2p1_0340F.1_g130200 Hydrangea macrophylla HOM05D006386 ORTHO05D007575 8.9e-62 241.1 244 52.9
Gohir.D11G038000 Gossypium hirsutum HOM05D006386 ORTHO05D007575 2.0e-61 240.0 244 50.4
Potri.015G055500 Populus trichocarpa HOM05D006386 ORTHO05D007575 3.4e-61 239.2 242 51.2
AUR62032161 Chenopodium quinoa HOM05D006386 ORTHO05D007575 4.4e-61 238.8 238 50.4
TWI81G0025 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 4.4e-61 238.8 244 50.8
Oeu010193.1 Olea europaea HOM05D006386 ORTHO05D007575 4.9e-60 235.3 242 51.2
RcHm_v2.0_Chr7g0184161 Rosa chinensis HOM05D006386 ORTHO05D007575 1.6e-58 230.3 244 50.4
FAN18G3466 Fragaria x ananassa HOM05D006386 ORTHO05D007575 4.6e-58 228.8 244 49.6
FvH4_5g13000 Fragaria vesca HOM05D006386 ORTHO05D007575 1.3e-57 227.3 244 49.6
TAR629G0047 Trochodendron aralioides HOM05D002187 ORTHO05D002243 1.3e-57 227.3 190 60.0
Cfa019518 Carpinus fangiana HOM05D006386 ORTHO05D007575 1.7e-57 226.9 245 49.0
CANSAT80G2620 Cannabis sativa HOM05D006386 ORTHO05D007575 3.0e-57 226.1 244 48.4
Peaxi162Scf00119g00118 Petunia axillaris HOM05D006386 ORTHO05D007575 1.1e-56 224.2 255 52.9
Gohir.A11G034600 Gossypium hirsutum HOM05D006386 ORTHO05D007575 1.9e-56 223.4 245 48.2
FAN13G1489 Fragaria x ananassa HOM05D006386 ORTHO05D007575 3.3e-56 222.6 244 48.8
SalBow1G4471 Salvia bowleyana HOM05D006386 ORTHO05D007575 2.1e-55 219.9 241 47.3
Nn3g17620 Nelumbo nucifera HOM05D006386 ORTHO05D007575 2.8e-55 219.5 241 49.8
Sed0015508 Sechium edule HOM05D006386 ORTHO05D007575 2.8e-55 219.5 244 48.4
CiPaw.16G081700 Carya illinoinensis HOM05D006386 ORTHO05D007575 3.6e-55 219.2 244 48.0
FAN08G0928 Fragaria x ananassa HOM05D006386 ORTHO05D007575 3.6e-55 219.2 244 47.5
Lalb_Chr13g0302571 Lupinus albus HOM05D006386 ORTHO05D007575 4.7e-55 218.8 243 48.1
Manes.01G023400 Manihot esculenta HOM05D006386 ORTHO05D007575 4.7e-55 218.8 245 47.3
QL10p021984 Quercus lobata HOM05D006386 ORTHO05D007575 4.7e-55 218.8 241 48.1
Sabra15G0080700 Salix brachista HOM05D006386 ORTHO05D007575 4.7e-55 218.8 270 44.8
CAN.G982.14 Capsicum annuum HOM05D006386 ORTHO05D007575 6.2e-55 218.4 137 83.2
Migut.D01482 Erythranthe guttata HOM05D006386 ORTHO05D007575 3.1e-54 216.1 244 48.4
Glyma.17G083800 Glycine max HOM05D006386 ORTHO05D007575 2.0e-53 213.4 244 45.5
EL10Ac9g20981 Beta vulgaris HOM05D006386 ORTHO05D007575 2.6e-53 213.0 239 47.3
HanXRQChr16g0502011 Helianthus annuus HOM05D006386 ORTHO05D007575 3.4e-53 212.6 244 48.0
Lj6g0003397 Lotus japonicus HOM05D006386 ORTHO05D007575 3.4e-53 212.6 244 45.5
THA.LOC104819388 Tarenaya hassleriana HOM05D006386 ORTHO05D007575 4.4e-53 212.2 248 48.0
Sc04g0004070 Simmondsia chinensis HOM05D006386 ORTHO05D007575 5.8e-53 211.8 254 45.3
vmacro17651 Vaccinium macrocarpon HOM05D006386 ORTHO05D007575 2.2e-52 209.9 178 57.9
VMungo1215G2864 Vigna mungo HOM05D006386 ORTHO05D007575 1.1e-51 207.6 244 44.7
Phvul.002G142200 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 1.9e-51 206.8 244 45.5
ClCG06G015230 Citrullus lanatus HOM05D006386 ORTHO05D007575 3.2e-51 206.1 244 46.7
Glyma.05G016300 Glycine max HOM05D006386 ORTHO05D007575 7.1e-51 204.9 236 45.3
Eucgr.K02638 Eucalyptus grandis HOM05D006386 ORTHO05D007575 1.2e-50 204.1 245 45.7
Phvul.003G180600 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 1.2e-50 204.1 243 45.7
Ca_21735_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 1.6e-50 203.8 241 44.4
Lsat_1_v5_gn_4_112761 Lactuca sativa HOM05D006386 ORTHO05D007575 6.0e-50 201.8 245 44.9
PSO017G3209 Papaver somniferum HOM05D006386 ORTHO05D007575 6.0e-50 201.8 254 42.9
PSO478G3500 Papaver somniferum HOM05D006386 ORTHO05D007575 6.6e-49 198.4 254 42.1
SGA_v2.0_scaffold42G16024 Striga asiatica HOM05D006386 ORTHO05D007575 1.1e-48 197.6 266 44.7
MSTRG.4502 Avicennia marina HOM05D006386 ORTHO05D007575 2.5e-48 196.4 241 45.6
MD14G1218500 Malus domestica HOM05D006386 ORTHO05D007575 4.3e-48 195.7 246 45.1
Medtr4g112610 Medicago truncatula HOM05D006386 ORTHO05D007575 4.3e-48 195.7 245 44.9
PGR044G0997 Punica granatum HOM05D006386 ORTHO05D007575 5.6e-48 195.3 240 46.2
Medtr4g112830 Medicago truncatula HOM05D006386 ORTHO05D007575 9.6e-48 194.5 248 44.0
Lsat_1_v5_gn_4_112801 Lactuca sativa HOM05D006386 ORTHO05D007575 2.8e-47 193.0 235 44.7
TPR.G23873 Trifolium pratense HOM05D006386 ORTHO05D007575 1.1e-46 191.0 246 44.3
ECA246G4419 Erigeron canadensis HOM05D006386 ORTHO05D007575 6.8e-46 188.3 243 43.2
arahy.Tifrunner.gnm1.ann1.HL5ANR Arachis hypogaea HOM05D006386 ORTHO05D007575 1.2e-45 187.6 238 44.1
unitig_62.g23762 Utricularia gibba HOM05D006386 ORTHO05D007575 1.5e-45 187.2 220 44.5
AL7G44320 Arabidopsis lyrata HOM05D006386 ORTHO05D007575 3.4e-45 186.0 246 42.7
arahy.Tifrunner.gnm1.ann1.3Z7JIG Arachis hypogaea HOM05D006386 ORTHO05D007575 4.4e-45 185.7 238 43.7
AT5G35520 Arabidopsis thaliana HOM05D006386 ORTHO05D007575 7.6e-45 184.9 246 42.3
Actinidia33576 Actinidia chinensis HOM05D006386 ORTHO05D007575 9.9e-45 184.5 259 41.3
Aa31LG4G9830 Aethionema arabicum HOM05D006386 ORTHO05D007575 8.4e-44 181.4 246 41.5
Prupe.5G212600 Prunus persica HOM05D006386 ORTHO05D007575 3.2e-43 179.5 242 43.8
Carub.0007s3127 Capsella rubella HOM05D006386 ORTHO05D007575 4.2e-43 179.1 249 41.4
CARHR217490 Cardamine hirsuta HOM05D006386 ORTHO05D007575 5.4e-43 178.7 247 41.3
CDE02G3865 Ceratophyllum demersum HOM05D006386 ORTHO05D007575 1.0e-41 174.5 244 42.2
ECA232G1078 Erigeron canadensis HOM05D006386 ORTHO05D007575 1.0e-41 174.5 244 41.4
Thhalv10003465m.g Eutrema salsugineum HOM05D006386 ORTHO05D007575 1.3e-41 174.1 246 41.1
arahy.Tifrunner.gnm1.ann1.X9R15Y Arachis hypogaea HOM05D006386 ORTHO05D007575 1.5e-40 170.6 260 39.6
Sp7g06840 Schrenkiella parvula HOM05D006386 ORTHO05D007575 2.5e-40 169.9 247 39.3
Aqoxy6G00629 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 3.3e-40 169.5 235 42.1
MSTRG.4503 Avicennia marina HOM05D006386 ORTHO05D007575 4.3e-40 169.1 178 51.1
ATR0730G046 Amborella trichopoda HOM05D006386 ORTHO05D007575 4.8e-39 165.6 246 38.6
SHI18989 Sapria himalayana HOM05D006386 ORTHO05D007575 6.2e-39 165.2 180 49.4
BcaB06g26945 Brassica carinata HOM05D006386 ORTHO05D007575 3.1e-38 162.9 246 38.6
CsaV3_1G003130 Cucumis sativus L. HOM05D006386 ORTHO05D007575 3.2e-35 152.9 247 40.5
C04p43230 Brassica napus HOM05D006386 ORTHO05D007575 4.2e-35 152.5 251 37.8
Aqoxy3G00630 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 1.3e-33 147.5 236 39.4
BcaC02g09476 Brassica carinata HOM05D006386 ORTHO05D007575 1.7e-33 147.1 248 37.5
BolC4t25901H Brassica oleracea HOM05D006386 ORTHO05D007575 3.0e-33 146.4 248 37.5
HPP92_015441 Vanilla planifolia HOM05D006386 ORTHO05D007575 3.9e-33 146.0 252 36.9
Psat4g044400 Pisum sativum HOM05D006386 ORTHO05D007575 8.7e-33 144.8 242 38.8
MBI10_g16789_MAGBIO Magnolia biondii HOM05D006386 ORTHO05D007575 1.5e-32 144.1 174 46.6
A04p09730 Brassica napus HOM05D006386 ORTHO05D007575 2.4e-30 136.7 203 38.4
BraA04t16635Z Brassica rapa HOM05D006386 ORTHO05D007575 1.5e-29 134.0 205 38.5
MD06G1208100 Malus domestica HOM05D006386 ORTHO05D007575 9.3e-27 124.8 178 42.1
arahy.Tifrunner.gnm1.ann1.7DA3AY Arachis hypogaea HOM05D006386 ORTHO05D007575 2.7e-26 123.2 244 34.8
Cpa.g.sc53.23 Carica papaya HOM05D006386 ORTHO05D007575 1.1e-24 117.9 76 75.0
Zm00001eb433940 Zea mays HOM05D006386 ORTHO05D007575 9.6e-24 114.8 220 32.7
Os02g0620100 Oryza sativa ssp. japonica HOM05D006386 ORTHO05D007575 2.1e-23 113.6 236 30.9
DCAR_029598 Daucus carota HOM05D006386 ORTHO05D007575 1.9e-19 100.5 134 44.8
Actinidia27067 Actinidia chinensis HOM05D006386 ORTHO05D007575 4.6e-18 95.9 60 75.0
Cpa.g.sc53.22 Carica papaya HOM05D006386 ORTHO05D007575 1.8e-17 94.0 131 38.2
MELO3C028557.2 Cucumis melo HOM05D006386 ORTHO05D007575 3.0e-17 93.2 58 75.9
AUR62036917 Chenopodium quinoa HOM05D006386 ORTHO05D007575 3.9e-17 92.8 152 32.2
Zm00001eb065850 Zea mays HOM05D006386 ORTHO05D007575 1.5e-16 90.9 202 29.7
TWI81G0622 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 9.0e-14 81.6 138 34.8
Rhsim08G0139600 Rhododendron simsii HOM05D006386 ORTHO05D007575 7.2e-11 72.0 41 75.6
Gorai.N008500 Gossypium raimondii HOM05D006386 ORTHO05D007575 4.6e-10 69.3 40 75.0
Aqoxy6G02623 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 2.3e-09 67.0 105 40.0
Gorai.007G248400 Gossypium raimondii HOM05D006386 ORTHO05D007575 1.9e-08 63.9 38 71.1
Mapoly0051s0086 Marchantia polymorpha HOM05D006386 ORTHO05D007575 3.7e-07 59.7 147 25.9
Ca_24277_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 6.9e-06 55.5 105 34.3


User provided reference genes

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