Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 1.0e-131 473.4 239 100.0
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 2.0e-127 459.1 239 96.7
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 1.2e-119 433.3 243 93.4
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 1.8e-104 382.9 250 82.4
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 6.7e-99 364.4 247 79.8
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 3.0e-91 339.0 238 79.8
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 1.2e-79 300.4 253 63.2
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 2.7e-79 299.3 245 66.1
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 7.8e-79 297.7 225 68.4
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 7.8e-79 297.7 201 73.6
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 2.3e-78 296.2 241 63.5
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 1.1e-77 293.9 258 62.0
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 1.1e-77 293.9 226 67.7
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 1.2e-76 290.4 183 74.9
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 4.7e-76 288.5 245 63.7
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 8.0e-76 287.7 237 65.4
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 1.8e-75 286.6 204 71.6
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 2.3e-75 286.2 246 61.4
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 8.9e-75 284.3 183 76.0
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 1.2e-74 283.9 232 66.8
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 2.0e-74 283.1 201 71.1
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 3.4e-74 282.3 232 65.9
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 5.8e-74 281.6 187 72.7
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 7.5e-74 281.2 197 70.6
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 9.8e-74 280.8 198 73.2
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 1.7e-73 280.0 181 75.1
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 2.2e-73 279.6 228 64.0
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 2.2e-73 279.6 171 79.5
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 2.9e-73 279.3 243 62.1
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 2.9e-73 279.3 195 71.3
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 3.7e-73 278.9 187 73.8
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 8.3e-73 277.7 191 72.3
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 1.1e-72 277.3 240 61.2
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 1.4e-72 276.9 209 68.9
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 1.8e-72 276.6 206 68.4
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 3.2e-72 275.8 183 74.3
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 4.1e-72 275.4 190 71.6
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 7.0e-72 274.6 240 64.2
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 9.2e-72 274.2 196 69.4
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 9.2e-72 274.2 167 77.2
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 9.2e-72 274.2 226 66.8
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 1.2e-71 273.9 244 60.2
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 1.6e-71 273.5 209 67.5
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.6e-71 273.5 170 77.1
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 2.7e-71 272.7 226 63.3
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 3.5e-71 272.3 249 58.6
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 3.5e-71 272.3 172 77.9
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 4.6e-71 271.9 172 79.1
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 1.0e-70 270.8 172 78.5
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 3.9e-70 268.9 231 64.5
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 6.6e-70 268.1 167 75.4
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 2.5e-69 266.2 167 74.3
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 3.3e-69 265.8 208 66.8
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 4.3e-69 265.4 171 76.6
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 7.3e-69 264.6 252 57.1
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 1.2e-68 263.8 188 72.3
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.6e-68 263.5 186 70.4
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 2.1e-68 263.1 182 69.8
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 2.1e-68 263.1 208 66.3
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 2.8e-68 262.7 166 78.3
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 2.8e-68 262.7 171 76.6
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 4.7e-68 261.9 201 63.2
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 1.1e-67 260.8 198 64.1
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 1.4e-67 260.4 208 63.0
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 1.8e-67 260.0 169 71.6
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 2.3e-67 259.6 244 55.3
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 3.1e-67 259.2 170 71.8
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 4.0e-67 258.8 167 74.3
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 5.2e-67 258.5 170 71.8
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 5.2e-67 258.5 234 56.4
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 8.9e-67 257.7 170 71.8
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 8.9e-67 257.7 170 71.8
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 2.0e-66 256.5 172 69.2
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 2.0e-66 256.5 169 70.4
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 2.0e-66 256.5 169 70.4
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 2.6e-66 256.1 244 54.5
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 2.6e-66 256.1 208 62.5
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 3.4e-66 255.8 202 65.3
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 3.4e-66 255.8 167 73.7
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 4.4e-66 255.4 172 70.9
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 9.8e-66 254.2 169 69.2
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 1.3e-65 253.8 169 70.4
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 1.3e-65 253.8 172 69.8
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 1.7e-65 253.4 206 65.0
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 2.2e-65 253.1 158 77.2
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 2.9e-65 252.7 172 69.2
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 3.7e-65 252.3 245 55.1
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 6.4e-65 251.5 215 61.9
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 1.1e-64 250.8 230 57.0
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 1.4e-64 250.4 172 68.0
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 2.4e-64 249.6 237 54.9
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 3.2e-64 249.2 169 68.6
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 3.2e-64 249.2 169 68.6
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 3.2e-64 249.2 172 68.6
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 1.6e-63 246.9 223 57.4
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 7.8e-63 244.6 198 63.1
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 3.9e-62 242.3 227 57.7
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 8.6e-62 241.1 144 83.3
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 8.6e-62 241.1 249 54.2
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 2.3e-59 233.0 156 68.6
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 8.9e-59 231.1 157 68.2
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 1.7e-57 226.9 168 65.5
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 1.7e-57 226.9 225 53.3
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 2.2e-57 226.5 153 71.2
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 4.1e-56 222.2 139 79.9
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 4.1e-56 222.2 166 63.3
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 7.1e-56 221.5 214 54.7
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 2.1e-55 219.9 229 57.2
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 1.9e-53 213.4 189 61.9
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 7.3e-53 211.5 167 63.5
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 6.2e-52 208.4 128 81.2
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 2.7e-47 193.0 135 69.6
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 3.5e-47 192.6 119 79.8
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 6.6e-46 188.3 159 56.6
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 6.6e-46 188.3 121 77.7
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 9.6e-45 184.5 117 76.1
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 3.6e-44 182.6 173 53.8
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 6.9e-43 178.3 145 59.3
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 2.0e-42 176.8 117 71.8
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 2.2e-41 173.3 120 68.3
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 2.2e-41 173.3 120 68.3
QL10p015509 Quercus lobata HOM05D005796 ORTHO05D007054 6.0e-39 165.2 95 82.1
CAN.G4519.1 Capsicum annuum HOM05D005796 ORTHO05D007054 1.1e-37 161.0 82 96.3
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 1.2e-34 151.0 193 48.7
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 1.1e-32 144.4 133 57.9
Sed0018874 Sechium edule HOM05D005796 ORTHO05D007054 1.3e-22 110.9 153 47.7
FvH4_5g15530 Fragaria vesca HOM05D005796 ORTHO05D007054 5.1e-22 109.0 127 48.0
QL10p015507 Quercus lobata HOM05D005796 ORTHO05D007054 5.1e-22 109.0 72 75.0
MCO14G168 Micromonas commoda HOM05D005796 ORTHO05D007054 1.6e-15 87.4 154 31.8
Nn4g23032 Nelumbo nucifera HOM05D005796 ORTHO05D007054 2.7e-15 86.7 99 48.5
Glyma.05G030200 Glycine max HOM05D005796 ORTHO05D007054 2.5e-13 80.1 50 74.0
Rhsim08G0160200 Rhododendron simsii HOM05D005796 ORTHO05D007054 2.9e-09 66.6 36 77.8
Cre06.g295826 Chlamydomonas reinhardtii HOM05D005796 ORTHO05D007054 1.4e-08 64.3 129 26.4
C09p08830 Brassica napus HOM05D005796 ORTHO05D007054 4.2e-08 62.8 36 66.7
Cre11.g467679 Chlamydomonas reinhardtii HOM05D019738 ORTHO05D022279 1.2e-07 61.2 146 31.5


User provided reference genes

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