Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g032040 Solanum pennellii HOM05D008788 ORTHO05D012497 3.4e-150 535.0 278 100.0
Solyc03g112970.1 Solanum lycopersicum HOM05D008788 ORTHO05D012497 1.4e-140 503.1 278 94.6
PGSC0003DMG400018146 Solanum tuberosum HOM05D008788 ORTHO05D012497 1.9e-124 449.5 288 84.7
Nitab4.5_0000785g0060 Nicotiana tabacum HOM05D008788 ORTHO05D012497 4.0e-95 352.1 268 72.4
Sopen03g032030 Solanum pennellii HOM05D008788 ORTHO05D012497 2.9e-93 345.9 272 70.6
Peaxi162Scf00009g00114 Petunia axillaris HOM05D001734 ORTHO05D003483 3.8e-93 345.5 272 69.9
Nitab4.5_0000984g0100 Nicotiana tabacum HOM05D008788 ORTHO05D012497 1.4e-92 343.6 273 70.7
Solyc03g112960.1 Solanum lycopersicum HOM05D008788 ORTHO05D012497 7.1e-92 341.3 272 69.1
CAN.G1305.14 Capsicum annuum HOM05D008788 ORTHO05D012497 6.2e-80 301.6 250 64.0
CAN.G1673.12 Capsicum annuum HOM05D008788 ORTHO05D012497 6.3e-72 275.0 220 66.4
Nitab4.5_0000741g0040 Nicotiana tabacum HOM05D008788 ORTHO05D012497 2.6e-49 199.9 247 51.0
Peaxi162Scf00267g00131 Petunia axillaris HOM05D008788 ORTHO05D012497 1.3e-40 171.0 286 41.6
CAN.G1305.15 Capsicum annuum HOM05D008788 ORTHO05D012497 2.8e-40 169.9 116 69.0
Nitab4.5_0000026g0140 Nicotiana tabacum HOM05D008788 ORTHO05D012497 2.2e-32 143.7 237 41.4
Nitab4.5_0000741g0020 Nicotiana tabacum HOM05D008788 ORTHO05D012497 4.0e-26 122.9 229 39.3
Cc04_g17010 Coffea canephora HOM05D008788 ORTHO05D012497 6.8e-26 122.1 275 36.0
PGSC0003DMG400018147 Solanum tuberosum HOM05D008788 ORTHO05D012497 2.6e-25 120.2 132 59.1
Migut.D01837 Erythranthe guttata HOM05D008788 ORTHO05D012497 3.5e-22 109.8 266 34.2
Cc04_g16990 Coffea canephora HOM05D008788 ORTHO05D012497 4.5e-22 109.4 276 33.0
Nitab4.5_0000026g0150 Nicotiana tabacum HOM05D008788 ORTHO05D012497 2.9e-16 90.1 190 35.3
Oeu060796.1 Olea europaea HOM05D008788 ORTHO05D012497 2.4e-15 87.0 262 31.3
Manes.14G076700 Manihot esculenta HOM05D000281 ORTHO05D009440 4.1e-15 86.3 235 29.4
Peaxi162Scf00267g00137 Petunia axillaris HOM05D008788 ORTHO05D012497 4.1e-15 86.3 107 43.9
Sabra01G0081700 Salix brachista HOM05D000281 ORTHO05D009440 4.1e-15 86.3 222 29.3
TWI81G0565 Tripterygium wilfordii HOM05D000281 ORTHO05D009440 4.6e-14 82.8 198 31.3
Sabra03G0087100 Salix brachista HOM05D000281 ORTHO05D009440 3.0e-13 80.1 221 31.7
Duzib068G0437 Durio zibethinus HOM05D000281 ORTHO05D009440 5.0e-13 79.3 231 26.0
Potri.003G123500 Populus trichocarpa HOM05D000281 ORTHO05D009440 8.6e-13 78.6 230 29.1
Peaxi162Scf00712g00610 Petunia axillaris HOM05D008788 ORTHO05D012497 1.1e-12 78.2 228 30.3
Potri.001G108200 Populus trichocarpa HOM05D000281 ORTHO05D009440 1.5e-12 77.8 219 29.7
Cc04_g17040 Coffea canephora HOM05D008788 ORTHO05D017864 6.2e-11 72.4 309 26.2
THA.LOC104819444 Tarenaya hassleriana HOM05D000036 ORTHO05D009440 2.2e-08 63.9 211 24.2
Actinidia19045 Actinidia chinensis HOM05D008788 ORTHO05D009440 6.4e-08 62.4 94 37.2
BcaC08g43560 Brassica carinata HOM05D000036 ORTHO05D002265 8.3e-08 62.0 187 26.7
QL05p001219 Quercus lobata HOM05D000036 ORTHO05D002265 8.3e-08 62.0 166 27.7
Migut.D01839 Erythranthe guttata HOM05D018109 ORTHO05D017864 1.1e-07 61.6 268 26.9
Cc04_g00700 Coffea canephora HOM05D000036 ORTHO05D002265 4.1e-07 59.7 194 24.2
Sabra03G0043500 Salix brachista HOM05D000036 ORTHO05D002265 7.1e-07 58.9 166 27.7
CSS0007314 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D002265 2.1e-06 57.4 217 25.3
CSS0042964 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D002265 2.1e-06 57.4 164 28.7
Aa31LG4G16400 Aethionema arabicum HOM05D000281 ORTHO05D009440 2.7e-06 57.0 230 27.0
Carub.0005s1380 Capsella rubella HOM05D000281 ORTHO05D009440 2.7e-06 57.0 211 26.1
AT3G47670 Arabidopsis thaliana HOM05D000281 ORTHO05D009440 4.6e-06 56.2 230 26.1
TWI59G0275 Tripterygium wilfordii HOM05D000036 ORTHO05D002265 4.6e-06 56.2 165 26.7


User provided reference genes

Program Settings