Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g032000 Solanum pennellii HOM05D005335 ORTHO05D006472 4.3e-74 281.6 177 100.0
Solyc03g112920.1 Solanum lycopersicum HOM05D005335 ORTHO05D006472 1.6e-73 279.6 177 99.4
CAN.G1305.23 Capsicum annuum HOM05D005335 ORTHO05D006472 3.7e-62 241.9 177 91.5
PGSC0003DMG400018091 Solanum tuberosum HOM05D005335 ORTHO05D006472 6.4e-62 241.1 177 91.0
Nitab4.5_0002403g0010 Nicotiana tabacum HOM05D005335 ORTHO05D006472 8.1e-49 197.6 179 83.8
Nitab4.5_0000514g0170 Nicotiana tabacum HOM05D005335 ORTHO05D006472 1.3e-46 190.3 179 81.0
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 2.7e-36 156.0 179 74.3
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 5.4e-29 131.7 183 61.7
MSTRG.11283 Avicennia marina HOM05D005335 ORTHO05D006472 1.5e-26 123.6 176 58.0
Haze_07140 Corylus avellana HOM05D005335 ORTHO05D006472 1.9e-26 123.2 178 66.3
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 2.5e-26 122.9 183 55.2
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 2.8e-25 119.4 180 57.2
Cfa018794 Carpinus fangiana HOM05D005335 ORTHO05D006472 1.1e-24 117.5 181 63.0
Oeu045458.1 Olea europaea HOM05D005335 ORTHO05D006472 1.8e-24 116.7 180 57.8
Oeu045459.1 Olea europaea HOM05D005335 ORTHO05D006472 1.8e-24 116.7 180 57.8
CiPaw.11G007000 Carya illinoinensis HOM05D005335 ORTHO05D006472 3.1e-24 115.9 182 62.1
Lsat_1_v5_gn_4_80981 Lactuca sativa HOM05D005335 ORTHO05D006472 6.9e-24 114.8 182 60.4
Thecc.03G129400 Theobroma cacao HOM05D005335 ORTHO05D006472 6.9e-24 114.8 179 58.1
Cc04_g09930 Coffea canephora HOM05D005335 ORTHO05D006472 5.8e-23 111.7 179 58.1
FAN13G0785 Fragaria x ananassa HOM05D005335 ORTHO05D006472 7.6e-23 111.3 181 53.6
Ciclev10032959m.g Citrus clementina HOM05D005335 ORTHO05D006472 1.0e-22 110.9 175 61.1
FAN04G0838 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.0e-22 110.9 181 61.3
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 1.0e-22 110.9 180 58.9
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 1.3e-22 110.5 185 57.3
COL.COLO4_28131 Corchorus olitorius HOM05D005335 ORTHO05D006472 2.2e-22 109.8 184 59.8
Duzib205G0334 Durio zibethinus HOM05D005335 ORTHO05D006472 2.9e-22 109.4 181 55.2
TAR371G0199 Trochodendron aralioides HOM05D005335 ORTHO05D006472 2.9e-22 109.4 178 53.9
Nn4g22311 Nelumbo nucifera HOM05D005335 ORTHO05D006472 3.8e-22 109.0 175 59.4
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 4.9e-22 108.6 182 43.4
Atru.chr6.1795 Acer truncatum HOM05D005335 ORTHO05D006472 8.4e-22 107.8 185 57.8
Cpa.g.sc13.114 Carica papaya HOM05D005335 ORTHO05D006472 8.4e-22 107.8 187 60.4
Oeu005014.1 Olea europaea HOM05D005335 ORTHO05D006472 2.5e-21 106.3 177 53.1
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 3.2e-21 105.9 181 50.3
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 9.3e-21 104.4 179 44.1
FAN08G1274 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.2e-20 104.0 181 59.7
QL10p002879 Quercus lobata HOM05D005335 ORTHO05D006472 1.6e-20 103.6 165 53.3
Prupe.5G150800 Prunus persica HOM05D005335 ORTHO05D006472 2.7e-20 102.8 169 61.5
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 3.5e-20 102.4 159 59.1
RcHm_v2.0_Chr7g0190101 Rosa chinensis HOM05D005335 ORTHO05D006472 3.5e-20 102.4 177 58.8
Potri.012G097901 Populus trichocarpa HOM05D005335 ORTHO05D006472 4.6e-20 102.1 187 55.1
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 6.0e-20 101.7 177 50.3
ClCG06G017900 Citrullus lanatus HOM05D005335 ORTHO05D006472 7.9e-20 101.3 183 59.6
TWI39G0987 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 1.0e-19 100.9 179 59.2
vmacro19206 Vaccinium macrocarpon HOM05D005335 ORTHO05D006472 1.0e-19 100.9 182 47.8
CiPaw.12G043300 Carya illinoinensis HOM05D005335 ORTHO05D006472 1.3e-19 100.5 168 58.9
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 1.8e-19 100.1 144 46.5
Potri.015G096500 Populus trichocarpa HOM05D005335 ORTHO05D006472 1.8e-19 100.1 135 66.7
FvH4_5g08350 Fragaria vesca HOM05D005335 ORTHO05D006472 2.3e-19 99.8 178 59.0
FAN18G1337 Fragaria x ananassa HOM05D005335 ORTHO05D006472 2.3e-19 99.8 178 59.0
HanXRQChr16g0498141 Helianthus annuus HOM05D005335 ORTHO05D006472 2.3e-19 99.8 183 53.0
MD06G1141500 Malus domestica HOM05D005335 ORTHO05D006472 2.3e-19 99.8 178 59.6
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 2.3e-19 99.8 180 41.7
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 3.0e-19 99.4 181 49.7
Sabra12G0071600 Salix brachista HOM05D005335 ORTHO05D006472 3.0e-19 99.4 135 63.7
Sabra15G0117300 Salix brachista HOM05D005335 ORTHO05D006472 3.0e-19 99.4 135 65.2
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 5.1e-19 98.6 177 42.9
Manes.06G119800 Manihot esculenta HOM05D005335 ORTHO05D006472 6.7e-19 98.2 183 57.9
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 6.7e-19 98.2 182 51.1
TAR629G1091 Trochodendron aralioides HOM05D005335 ORTHO05D006472 6.7e-19 98.2 176 55.7
MELO3C026206.2 Cucumis melo HOM05D005335 ORTHO05D006472 1.5e-18 97.1 183 59.0
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.9e-18 96.7 154 40.3
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.9e-18 96.7 154 40.3
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 5.7e-18 95.1 137 47.4
THA.LOC104821517 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 1.3e-17 94.0 176 55.1
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.6e-17 93.6 180 55.6
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.6e-17 93.6 180 55.6
Sed0021893 Sechium edule HOM05D005335 ORTHO05D006472 1.6e-17 93.6 178 51.7
Migut.I00507 Erythranthe guttata HOM05D005335 ORTHO05D006472 2.8e-17 92.8 178 55.1
Oeu030248.1 Olea europaea HOM05D005335 ORTHO05D006472 3.7e-17 92.4 175 55.4
Glyma.17G130400 Glycine max HOM05D005335 ORTHO05D006472 4.8e-17 92.0 135 67.4
PSO017G0745 Papaver somniferum HOM05D005335 ORTHO05D006472 4.8e-17 92.0 180 47.8
Dinv23148 Davidia involucrata HOM05D005335 ORTHO05D006472 8.2e-17 91.3 127 52.0
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 8.2e-17 91.3 180 55.0
VMungo1215G0398 Vigna mungo HOM05D005335 ORTHO05D006472 8.2e-17 91.3 161 59.0
CsaV3_1G000550 Cucumis sativus L. HOM05D005335 ORTHO05D006472 1.1e-16 90.9 180 58.9
PSO478G2775 Papaver somniferum HOM05D005335 ORTHO05D006472 1.8e-16 90.1 180 52.2
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 3.1e-16 89.4 154 53.9
Sed0012251 Sechium edule HOM05D005335 ORTHO05D006472 4.1e-16 89.0 171 55.0
Aqoxy3G00598 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 5.3e-16 88.6 178 50.0
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 6.9e-16 88.2 133 42.9
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 6.9e-16 88.2 157 54.8
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 9.0e-16 87.8 176 36.4
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 9.0e-16 87.8 88 53.4
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 9.0e-16 87.8 176 36.4
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 9.0e-16 87.8 88 53.4
GSVIVG01008545001 Vitis vinifera HOM05D005335 ORTHO05D006472 1.5e-15 87.0 86 88.4
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 2.0e-15 86.7 180 38.9
MD14G1156700 Malus domestica HOM05D005335 ORTHO05D006472 2.0e-15 86.7 178 56.7
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 2.6e-15 86.3 96 49.0
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.6e-15 86.3 180 39.4
Manes.14G051200 Manihot esculenta HOM05D005335 ORTHO05D006472 2.6e-15 86.3 174 54.0
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 3.4e-15 85.9 88 52.3
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 3.4e-15 85.9 88 52.3
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 3.4e-15 85.9 88 52.3
Ca_26102_v3 Cicer arietinum L. HOM05D005335 ORTHO05D006472 3.4e-15 85.9 86 86.0
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 3.4e-15 85.9 180 43.9
Lalb_Chr13g0297231 Lupinus albus HOM05D005335 ORTHO05D006472 3.4e-15 85.9 173 45.7
Migut.D01260 Erythranthe guttata HOM05D005335 ORTHO05D006472 4.5e-15 85.5 186 47.8
Actinidia25571 Actinidia chinensis HOM05D005335 ORTHO05D006472 5.8e-15 85.1 124 50.8
Medtr4g103250 Medicago truncatula HOM05D005335 ORTHO05D006472 5.8e-15 85.1 153 60.8
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 7.6e-15 84.7 178 37.6
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 1.0e-14 84.3 133 40.6
Glyma.05G048500 Glycine max HOM05D005335 ORTHO05D006472 1.0e-14 84.3 136 66.2
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 1.0e-14 84.3 88 51.1
unitig_744.g24466 Utricularia gibba HOM05D005335 ORTHO05D006472 1.0e-14 84.3 173 50.9
Lalb_Chr07g0183461 Lupinus albus HOM05D005335 ORTHO05D006472 1.3e-14 84.0 86 86.0
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 1.7e-14 83.6 176 34.7
Psat4g066680 Pisum sativum HOM05D005335 ORTHO05D006472 1.7e-14 83.6 155 60.0
TPR.G19227 Trifolium pratense HOM05D005335 ORTHO05D006472 2.2e-14 83.2 155 59.4
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 2.9e-14 82.8 88 50.0
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 5.0e-14 82.0 180 39.4
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 6.5e-14 81.6 86 50.0
Lj4g0005056 Lotus japonicus HOM05D005335 ORTHO05D006472 6.5e-14 81.6 153 43.8
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 8.4e-14 81.3 175 37.7
BcaC09g49876 Brassica carinata HOM05D005335 ORTHO05D006472 2.5e-13 79.7 176 51.1
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 2.5e-13 79.7 175 37.1
THA.LOC104818185 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 2.5e-13 79.7 179 50.8
TWI23G0456 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 4.2e-13 79.0 179 54.2
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 5.5e-13 78.6 93 51.6
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 9.3e-13 77.8 178 36.5
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 6.1e-12 75.1 137 40.9
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 7.9e-12 74.7 177 37.9
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 7.9e-12 74.7 161 34.2
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 1.8e-11 73.6 89 50.6
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 5.1e-11 72.0 133 41.4
SGA_v2.0_scaffold5G02870 Striga asiatica HOM05D005335 ORTHO05D006472 6.7e-11 71.6 141 53.9
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 1.9e-10 70.1 134 40.3
SGA_v2.0_scaffold161G37793 Striga asiatica HOM05D005335 ORTHO05D006472 2.5e-10 69.7 143 37.1
CANSAT80G0357 Cannabis sativa HOM05D005335 ORTHO05D006472 1.6e-09 67.0 125 52.8
CARHR157350 Cardamine hirsuta HOM05D005335 ORTHO05D006472 8.2e-09 64.7 125 42.4
HanXRQChr05g0155191 Helianthus annuus HOM05D005335 ORTHO05D006472 1.4e-08 63.9 184 48.4
SEGI_18714 Sequoiadendron giganteum HOM05D005335 ORTHO05D006472 1.8e-08 63.5 91 69.2
HPP92_009722 Vanilla planifolia HOM05D005335 ORTHO05D006472 2.4e-08 63.2 174 30.5
C01p32260 Brassica napus HOM05D005335 ORTHO05D006472 1.2e-07 60.8 176 47.7
THA.LOC104798946 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 2.0e-07 60.1 87 70.1
Lj9P479T20 Lonicera japonica HOM05D005335 ORTHO05D006472 8.5e-06 54.7 69 84.1


User provided reference genes

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