Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 2.1e-196 688.7 320 100.0
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 5.1e-195 684.1 320 99.4
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 1.2e-191 672.9 320 97.8
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 1.6e-180 636.0 320 92.2
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 3.7e-177 624.8 320 89.7
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 3.1e-176 621.7 320 89.1
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 1.1e-168 596.7 316 85.4
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 3.0e-163 578.6 317 84.5
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.4e-160 569.7 320 81.6
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.2e-156 556.6 317 79.8
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 1.0e-155 553.5 317 78.2
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 9.8e-154 547.0 318 77.4
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 4.9e-153 544.7 317 75.7
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 6.4e-153 544.3 319 77.7
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 1.4e-152 543.1 318 76.7
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 1.2e-151 540.0 318 76.7
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 3.5e-151 538.5 317 75.7
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 5.0e-150 534.6 318 74.2
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 8.6e-150 533.9 318 74.8
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 8.6e-150 533.9 318 73.9
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 1.9e-149 532.7 318 75.8
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 3.3e-149 531.9 319 74.6
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 5.6e-149 531.2 306 78.8
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 7.3e-149 530.8 318 74.5
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 2.8e-148 528.9 319 73.0
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 3.6e-148 528.5 318 74.2
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 3.6e-148 528.5 318 75.2
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 6.2e-148 527.7 318 75.8
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 8.1e-148 527.3 319 74.6
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 1.8e-147 526.2 319 72.7
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 2.3e-147 525.8 318 74.5
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 4.0e-147 525.0 319 72.7
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 5.2e-147 524.6 319 72.7
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 6.8e-147 524.2 318 74.2
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 1.2e-146 523.5 321 73.5
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 1.2e-146 523.5 318 74.2
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.2e-146 523.5 318 74.2
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 2.6e-146 522.3 318 74.5
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 2.6e-146 522.3 318 73.9
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 4.4e-146 521.5 318 73.3
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 4.4e-146 521.5 319 73.4
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 7.5e-146 520.8 318 73.6
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 7.5e-146 520.8 321 73.2
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 9.8e-146 520.4 319 74.9
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 9.8e-146 520.4 317 73.2
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.3e-145 520.0 317 72.6
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.3e-145 520.0 318 73.9
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 1.7e-145 519.6 318 71.7
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.9e-145 518.8 317 71.9
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 4.9e-145 518.1 311 74.0
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 6.4e-145 517.7 318 72.3
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 8.3e-145 517.3 318 72.6
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 1.9e-144 516.2 319 72.7
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 5.4e-144 514.6 319 71.5
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 9.2e-144 513.8 319 71.5
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 1.6e-143 513.1 322 73.6
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 2.1e-143 512.7 313 72.5
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 3.5e-143 511.9 317 73.2
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 1.0e-142 510.4 315 72.7
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 1.3e-142 510.0 318 73.9
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.3e-142 510.0 305 73.1
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 1.7e-142 509.6 307 71.7
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 3.9e-142 508.4 308 72.4
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 3.9e-142 508.4 318 71.7
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.1e-141 506.9 306 73.5
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 1.5e-141 506.5 318 70.4
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 1.9e-141 506.1 319 70.8
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.9e-141 506.1 317 70.3
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 2.5e-141 505.8 319 70.5
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 2.5e-141 505.8 316 72.5
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 4.3e-141 505.0 308 72.4
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 4.3e-141 505.0 320 72.5
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 5.6e-141 504.6 321 72.6
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 5.6e-141 504.6 307 74.3
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 7.3e-141 504.2 307 73.3
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 9.5e-141 503.8 321 71.0
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 1.6e-140 503.1 318 71.4
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 2.8e-140 502.3 321 70.1
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 4.7e-140 501.5 313 70.6
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 4.7e-140 501.5 317 72.6
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 4.7e-140 501.5 319 71.8
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 4.7e-140 501.5 307 73.9
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 6.2e-140 501.1 313 70.9
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 6.2e-140 501.1 306 72.9
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 8.1e-140 500.7 306 71.9
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 1.8e-139 499.6 318 71.4
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 1.8e-139 499.6 315 71.7
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 4.0e-139 498.4 313 70.3
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 2.0e-138 496.1 306 71.6
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 2.0e-138 496.1 314 71.0
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 2.6e-138 495.7 306 71.6
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 4.4e-138 495.0 318 70.4
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 7.6e-138 494.2 310 71.3
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 9.9e-138 493.8 306 72.2
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 2.9e-137 492.3 307 72.6
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 3.8e-137 491.9 318 67.9
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 3.8e-137 491.9 306 71.9
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 6.4e-137 491.1 303 72.3
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 6.4e-137 491.1 294 72.8
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 2.4e-136 489.2 319 69.6
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 3.2e-136 488.8 305 72.8
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 7.1e-136 487.6 303 71.0
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 1.2e-135 486.9 321 68.8
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.6e-135 486.5 308 71.4
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 1.3e-134 483.4 303 70.6
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 3.0e-134 482.3 303 70.6
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 3.9e-134 481.9 318 67.3
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 3.9e-134 481.9 318 66.7
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 5.1e-134 481.5 303 70.6
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 6.6e-134 481.1 304 67.8
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 1.1e-133 480.3 303 70.3
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 3.3e-133 478.8 303 70.3
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 1.2e-132 476.9 304 70.7
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 3.6e-132 475.3 304 71.1
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 6.2e-132 474.6 304 70.1
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 6.2e-132 474.6 304 70.1
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 1.7e-129 466.5 315 67.3
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 2.2e-129 466.1 320 68.1
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 1.1e-128 463.8 318 67.6
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 2.4e-128 462.6 302 67.2
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 7.1e-128 461.1 288 73.3
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 7.8e-127 457.6 288 72.6
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 1.9e-125 453.0 288 69.4
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 1.6e-124 449.9 270 72.6
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 4.0e-123 445.3 304 67.8
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 2.9e-121 439.1 321 63.9
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 9.3e-120 434.1 318 61.6
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 3.5e-119 432.2 293 67.6
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 6.0e-119 431.4 313 61.3
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 1.9e-117 426.4 318 60.7
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.4e-115 420.2 308 59.7
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.4e-112 410.2 312 61.5
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.4e-112 410.2 306 58.8
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 5.3e-107 391.7 321 59.5
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 5.3e-107 391.7 321 59.5
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 6.9e-107 391.3 308 56.2
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.0e-105 387.5 295 63.4
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 2.7e-103 379.4 216 76.9
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 6.3e-100 368.2 305 54.4
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 1.4e-99 367.1 224 72.3
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 5.5e-96 355.1 307 54.7
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 3.1e-91 339.3 309 51.5
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 6.7e-86 321.6 273 58.2
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.5e-77 293.9 306 49.3
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 2.6e-69 266.5 181 68.0
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.8e-68 262.3 260 50.4
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 1.0e-49 201.4 126 68.3
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 6.6e-49 198.7 134 69.4
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 6.4e-44 182.2 318 33.6
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 5.9e-42 175.6 117 69.2
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 6.2e-39 165.6 301 32.9
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 9.5e-32 141.7 238 35.7
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 1.4e-27 127.9 338 26.9
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 7.8e-26 122.1 96 58.3
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.4e-14 84.0 57 70.2
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 5.2e-14 82.8 74 59.5


User provided reference genes

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