Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g030170 Solanum pennellii HOM05D008121 ORTHO05D009878 1.3e-85 319.7 169 100.0
Solyc03g110980.4 Solanum lycopersicum HOM05D008121 ORTHO05D009878 1.9e-84 315.8 169 98.8
PGSC0003DMG400015199 Solanum tuberosum HOM05D008121 ORTHO05D009878 9.4e-79 297.0 169 92.9
CAN.G352.52 Capsicum annuum HOM05D008121 ORTHO05D009878 7.0e-66 254.2 169 81.1
Nitab4.5_0005418g0010 Nicotiana tabacum HOM05D008121 ORTHO05D009878 4.5e-65 251.5 171 80.1
Nitab4.5_0005327g0050 Nicotiana tabacum HOM05D008121 ORTHO05D009878 1.0e-61 240.4 173 78.6
Peaxi162Scf00089g00311 Petunia axillaris HOM05D001839 ORTHO05D001867 5.4e-42 174.9 133 71.4
Oeu018378.1 Olea europaea HOM05D008121 ORTHO05D009878 9.8e-20 100.9 120 50.0
SGA_v2.0_scaffold161G37821 Striga asiatica HOM05D008121 ORTHO05D009878 6.4e-19 98.2 143 45.5
Cc04_g10260 Coffea canephora HOM05D008121 ORTHO05D009878 8.3e-19 97.8 171 43.9
CSS0015443 Camellia sinensis var. sinensis HOM05D008121 ORTHO05D009878 1.4e-18 97.1 163 41.7
MSTRG.22918 Avicennia marina HOM05D008121 ORTHO05D009878 4.1e-18 95.5 148 45.9
Migut.I00480 Erythranthe guttata HOM05D008121 ORTHO05D009878 1.6e-17 93.6 137 45.3
DCAR_026211 Daucus carota HOM05D008121 ORTHO05D009878 2.1e-17 93.2 150 44.0
Hma1.2p1_0014F.1_g009910 Hydrangea macrophylla HOM05D008121 ORTHO05D009878 3.9e-16 89.0 170 42.4
Actinidia25609 Actinidia chinensis HOM05D008121 ORTHO05D009878 5.1e-16 88.6 145 45.5
Atru.chr9.1017 Acer truncatum HOM05D008121 ORTHO05D009878 8.6e-16 87.8 174 37.4
HanXRQChr09g0272891 Helianthus annuus HOM05D008121 ORTHO05D009878 3.3e-15 85.9 145 42.1
Dinv38465 Davidia involucrata HOM05D008121 ORTHO05D009878 1.4e-13 80.5 134 47.0
Dinv02922 Davidia involucrata HOM05D008121 ORTHO05D009878 2.3e-13 79.7 134 47.8
Rhsim08G0185200 Rhododendron simsii HOM05D000290 ORTHO05D004630 5.2e-13 78.6 146 41.8
vmacro19236 Vaccinium macrocarpon HOM05D008121 ORTHO05D009878 5.2e-13 78.6 142 44.4
Potri.015G091100 Populus trichocarpa HOM05D008121 ORTHO05D009878 4.4e-12 75.5 187 37.4
Sabra15G0113100 Salix brachista HOM05D000290 ORTHO05D004630 5.8e-12 75.1 189 37.0
CANSAT80G0868 Cannabis sativa HOM05D008121 ORTHO05D009878 7.5e-12 74.7 179 35.8
QL10p005006 Quercus lobata HOM05D008121 ORTHO05D009878 9.9e-12 74.3 190 33.2
CiPaw.12G036100 Carya illinoinensis HOM05D008121 ORTHO05D009878 2.2e-11 73.2 167 36.5
RcHm_v2.0_Chr7g0190901 Rosa chinensis HOM05D008121 ORTHO05D009878 8.3e-11 71.2 191 33.5
Cpa.g.sc4.77 Carica papaya HOM05D008121 ORTHO05D009878 1.1e-10 70.9 156 41.0
FAN08G2628 Fragaria x ananassa HOM05D000290 ORTHO05D004630 1.4e-10 70.5 159 36.5
FvH4_5g07590 Fragaria vesca HOM05D008121 ORTHO05D009878 4.1e-10 68.9 192 33.3
Haze_07274 Corylus avellana HOM05D008121 ORTHO05D009878 2.1e-09 66.6 187 33.7
Prupe.5G156300 Prunus persica HOM05D008121 ORTHO05D009878 2.7e-09 66.2 198 32.3
FAN04G1418 Fragaria x ananassa HOM05D000290 ORTHO05D004630 6.0e-09 65.1 177 34.5
CiPaw.11G011700 Carya illinoinensis HOM05D008121 ORTHO05D009878 7.8e-09 64.7 181 32.6
GSVIVG01007536001 Vitis vinifera HOM05D008121 ORTHO05D009878 1.3e-08 63.9 159 35.8
MD06G1149100 Malus domestica HOM05D008121 ORTHO05D009878 1.7e-08 63.5 190 32.1
ECA232G1254 Erigeron canadensis HOM05D008121 ORTHO05D009878 3.0e-08 62.8 119 36.1
Cfa018889 Carpinus fangiana HOM05D008121 ORTHO05D009878 6.6e-08 61.6 201 33.3
AUR62001288 Chenopodium quinoa HOM05D008121 ORTHO05D009878 1.1e-07 60.8 155 34.8
Manes.14G055100 Manihot esculenta HOM05D008121 ORTHO05D009878 1.1e-07 60.8 194 31.4
unitig_8.g4185 Utricularia gibba HOM05D000357 ORTHO05D009878 1.1e-07 60.8 79 45.6
EL10Ac7g18085 Beta vulgaris HOM05D008121 ORTHO05D009878 3.3e-07 59.3 118 38.1
PSO384G0802 Papaver somniferum HOM05D008121 ORTHO05D009878 3.3e-07 59.3 48 72.9
Gohir.D09G246100 Gossypium hirsutum HOM05D008121 ORTHO05D009878 4.3e-07 58.9 177 34.5
Gorai.006G270600 Gossypium raimondii HOM05D008121 ORTHO05D009878 4.3e-07 58.9 177 34.5
PSO339G0123 Papaver somniferum HOM05D008121 ORTHO05D009878 9.5e-07 57.8 48 70.8
MELO3C002337.2 Cucumis melo HOM05D008121 ORTHO05D009878 1.2e-06 57.4 183 31.7
Duzib084G1233 Durio zibethinus HOM05D008121 ORTHO05D009878 1.2e-06 57.4 162 35.2
AT3G48490 Arabidopsis thaliana HOM05D011481 ORTHO05D009878 1.6e-06 57.0 110 35.5
BcaB01g00807 Brassica carinata HOM05D011481 ORTHO05D009878 1.6e-06 57.0 144 34.7
Ca_05561_v3 Cicer arietinum L. HOM05D008121 ORTHO05D009878 2.8e-06 56.2 78 43.6
Ciclev10023121m.g Citrus clementina HOM05D008121 ORTHO05D009878 2.8e-06 56.2 54 61.1
Ciclev10024026m.g Citrus clementina HOM05D008121 ORTHO05D009878 2.8e-06 56.2 54 61.1
CsaV3_1G009340 Cucumis sativus L. HOM05D008121 ORTHO05D009878 2.8e-06 56.2 187 33.2
Oeu045478.1 Olea europaea HOM05D040652 ORTHO05D036958 6.2e-06 55.1 132 35.6
Sed0025515 Sechium edule HOM05D008121 ORTHO05D009878 6.2e-06 55.1 193 32.1
Ah.15g095290 Amaranthus hybridus HOM05D001185 ORTHO05D002551 8.1e-06 54.7 125 37.6
Carub.0005s1467 Capsella rubella HOM05D011481 ORTHO05D009878 8.1e-06 54.7 117 38.5
TWI14G0571 Tripterygium wilfordii HOM05D008121 ORTHO05D009878 8.1e-06 54.7 190 32.6


User provided reference genes

Program Settings