Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 6.4e-123 444.1 227 100.0
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 3.7e-115 418.3 228 96.1
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 6.4e-107 391.0 232 89.7
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 6.4e-99 364.4 228 85.5
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.3e-96 356.7 235 82.6
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 2.8e-94 349.0 230 80.0
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 7.1e-90 334.3 227 80.2
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 3.4e-76 288.9 211 70.6
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 1.3e-75 287.0 226 67.7
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 6.5e-75 284.6 198 72.2
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 8.4e-75 284.3 203 71.9
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 3.2e-74 282.3 189 76.2
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 1.6e-73 280.0 204 71.1
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 1.0e-72 277.3 202 70.3
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.8e-72 276.6 203 70.0
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 6.7e-72 274.6 228 64.0
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 1.9e-71 273.1 231 64.1
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 5.7e-71 271.6 202 69.3
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 2.1e-70 269.6 224 61.6
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 4.8e-70 268.5 189 71.4
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 6.2e-70 268.1 185 73.5
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 1.1e-69 267.3 225 61.3
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 1.1e-69 267.3 187 73.8
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 4.1e-69 265.4 188 69.7
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 6.9e-69 264.6 204 66.2
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 6.9e-69 264.6 188 69.7
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 6.9e-69 264.6 220 63.6
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 6.9e-69 264.6 225 62.7
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 1.2e-68 263.8 214 63.6
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 1.2e-68 263.8 224 62.1
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 1.5e-68 263.5 182 72.0
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 3.4e-68 262.3 179 73.2
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 5.8e-68 261.5 228 61.4
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 7.6e-68 261.2 230 62.2
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 1.3e-67 260.4 209 63.6
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 1.7e-67 260.0 214 65.4
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 2.2e-67 259.6 187 73.8
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 3.8e-67 258.8 187 71.1
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 3.8e-67 258.8 192 67.7
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 8.4e-67 257.7 180 75.6
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 8.4e-67 257.7 225 60.0
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 1.1e-66 257.3 193 67.9
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 1.1e-66 257.3 228 60.1
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 1.4e-66 256.9 238 62.2
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 1.9e-66 256.5 183 68.9
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 3.2e-66 255.8 187 69.5
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 5.5e-66 255.0 198 66.7
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 5.5e-66 255.0 275 54.5
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 2.7e-65 252.7 180 70.6
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 1.0e-64 250.8 180 67.8
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.0e-64 250.8 180 67.8
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.0e-64 250.8 180 67.8
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 2.3e-64 249.6 196 69.9
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 2.3e-64 249.6 190 66.3
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 3.0e-64 249.2 191 69.1
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 5.1e-64 248.4 175 73.1
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 1.1e-63 247.3 171 72.5
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.1e-63 247.3 180 67.2
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 1.1e-63 247.3 172 72.7
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 1.5e-63 246.9 234 59.0
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 1.5e-63 246.9 240 58.3
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 1.9e-63 246.5 219 60.3
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 7.4e-63 244.6 197 67.5
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.3e-62 243.8 180 66.7
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 1.3e-62 243.8 194 65.5
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 6.3e-62 241.5 246 56.9
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 6.9e-61 238.0 215 57.7
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 3.4e-60 235.7 191 64.4
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 5.9e-60 235.0 257 54.5
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 1.0e-59 234.2 177 68.4
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 1.3e-59 233.8 156 73.1
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 2.9e-59 232.6 177 67.8
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 1.1e-58 230.7 177 67.8
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 9.4e-58 227.6 245 55.1
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 1.6e-57 226.9 185 62.7
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 3.0e-56 222.6 239 52.3
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 2.0e-55 219.9 181 65.7
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 2.5e-55 219.5 189 61.4
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 4.3e-55 218.8 231 54.1
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 5.7e-55 218.4 189 59.8
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 7.4e-55 218.0 174 66.1
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 9.7e-55 217.6 191 61.3
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 1.3e-54 217.2 230 54.3
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 2.8e-54 216.1 189 60.3
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 1.4e-53 213.8 196 58.7
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 1.8e-53 213.4 232 53.0
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 1.8e-53 213.4 232 53.0
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 1.8e-53 213.4 137 75.2
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 1.8e-53 213.4 191 60.7
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 6.9e-53 211.5 165 66.7
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 1.2e-41 174.1 152 59.2
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 6.1e-41 171.8 191 52.4
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 9.7e-39 164.5 99 79.8
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 2.2e-38 163.3 99 77.8
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 9.1e-37 157.9 164 53.7
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 1.6e-33 147.1 180 47.8
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 4.8e-30 135.6 116 63.8
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 1.2e-28 131.0 99 68.7
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 2.7e-28 129.8 120 61.7
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 1.3e-27 127.5 151 45.0
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 5.7e-23 112.1 62 83.9
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.7e-22 110.5 64 76.6
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 4.1e-21 105.9 107 56.1
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 3.3e-18 96.3 84 61.9
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 1.2e-15 87.8 111 43.2
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 2.2e-14 83.6 110 47.3
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.0e-12 77.0 59 64.4
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 2.3e-11 73.6 61 65.6
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 5.0e-11 72.4 61 62.3
PRCOL_00005130 Prasinoderma coloniale HOM05D003314 ORTHO05D004164 1.2e-07 61.2 92 37.0
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 1.5e-07 60.8 107 42.1
Cre17.g714900 Chlamydomonas reinhardtii HOM05D007115 ORTHO05D008923 2.2e-06 57.0 157 29.3


User provided reference genes

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