Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 7.4e-65 250.4 125 100.0
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 8.5e-61 236.9 125 96.0
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 2.4e-55 218.8 129 89.9
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 1.5e-44 183.0 126 77.8
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 9.4e-44 180.3 125 76.0
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 4.7e-43 177.9 126 75.4
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 2.0e-41 172.6 129 73.6
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 1.0e-29 133.7 119 60.5
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 1.0e-29 133.7 119 60.5
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 1.7e-29 132.9 124 62.1
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 2.9e-29 132.1 133 58.6
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 5.0e-29 131.3 119 59.7
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 6.6e-29 131.0 120 62.5
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 8.6e-29 130.6 100 69.0
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 2.5e-28 129.0 119 58.0
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 3.3e-28 128.6 119 59.7
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 4.3e-28 128.3 126 55.6
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 5.6e-28 127.9 121 62.0
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 7.3e-28 127.5 125 59.2
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 7.3e-28 127.5 125 57.6
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 9.5e-28 127.1 112 66.1
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 2.1e-27 125.9 126 59.5
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 2.8e-27 125.6 133 54.9
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 2.3e-26 122.5 133 56.4
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 3.0e-26 122.1 125 60.0
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 5.2e-26 121.3 118 57.6
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 6.8e-26 120.9 118 57.6
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 6.8e-26 120.9 126 50.8
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 8.9e-26 120.6 138 53.6
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 1.5e-25 119.8 132 57.6
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 1.5e-25 119.8 89 65.2
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 1.5e-25 119.8 89 65.2
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 2.6e-25 119.0 79 74.7
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 2.6e-25 119.0 93 64.5
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 7.5e-25 117.5 99 63.6
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 9.8e-25 117.1 116 55.2
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 1.3e-24 116.7 124 56.5
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 1.7e-24 116.3 106 57.5
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 2.9e-24 115.5 122 52.5
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 4.9e-24 114.8 124 50.8
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 6.4e-24 114.4 126 54.0
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 6.4e-24 114.4 115 59.1
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 6.4e-24 114.4 111 55.9
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 8.3e-24 114.0 115 56.5
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 1.4e-23 113.2 95 64.2
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 3.2e-23 112.1 94 57.4
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 3.2e-23 112.1 126 53.2
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 5.4e-23 111.3 89 69.7
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 5.4e-23 111.3 135 48.1
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 7.0e-23 110.9 115 54.8
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 9.2e-23 110.5 79 68.4
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 1.2e-22 110.2 117 53.0
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 1.6e-22 109.8 107 55.1
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 1.6e-22 109.8 79 68.4
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 1.6e-22 109.8 80 67.5
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 2.7e-22 109.0 79 65.8
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 2.7e-22 109.0 100 57.0
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 2.7e-22 109.0 74 73.0
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 3.5e-22 108.6 130 50.0
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 4.6e-22 108.2 100 57.0
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 4.6e-22 108.2 79 63.3
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 4.6e-22 108.2 80 65.0
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 6.0e-22 107.8 93 62.4
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 6.0e-22 107.8 131 48.9
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 7.8e-22 107.5 75 73.3
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 7.8e-22 107.5 135 51.1
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 1.0e-21 107.1 80 65.0
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 1.3e-21 106.7 74 73.0
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 1.3e-21 106.7 75 73.3
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 1.7e-21 106.3 77 72.7
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 1.7e-21 106.3 75 72.0
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 1.7e-21 106.3 77 72.7
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 1.7e-21 106.3 77 72.7
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 1.7e-21 106.3 126 50.8
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 1.7e-21 106.3 92 60.9
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 2.3e-21 105.9 75 72.0
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 2.3e-21 105.9 75 72.0
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 2.3e-21 105.9 79 64.6
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 3.0e-21 105.5 76 71.1
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 3.0e-21 105.5 76 71.1
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 3.0e-21 105.5 76 71.1
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 3.0e-21 105.5 134 47.0
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 3.9e-21 105.1 76 73.7
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 3.9e-21 105.1 78 69.2
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 5.0e-21 104.8 79 67.1
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 5.0e-21 104.8 200 39.0
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 5.0e-21 104.8 97 55.7
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 5.0e-21 104.8 79 67.1
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 5.0e-21 104.8 79 69.6
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 6.6e-21 104.4 75 72.0
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 6.6e-21 104.4 90 64.4
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 1.5e-20 103.2 74 67.6
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 1.9e-20 102.8 76 69.7
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 2.5e-20 102.4 76 69.7
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 4.3e-20 101.7 83 57.8
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 1.6e-19 99.8 121 52.9
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 2.1e-19 99.4 90 61.1
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 2.3e-18 95.9 80 63.8
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 4.0e-18 95.1 80 58.8
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 1.2e-17 93.6 72 65.3
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 3.4e-17 92.0 73 57.5
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 5.8e-17 91.3 112 48.2
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 2.2e-16 89.4 130 43.1
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 3.7e-16 88.6 82 57.3
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 3.7e-16 88.6 63 69.8
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 3.7e-16 88.6 63 69.8
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 6.4e-16 87.8 99 48.5
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 1.4e-15 86.7 69 62.3
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 4.1e-15 85.1 100 47.0
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 4.1e-15 85.1 61 65.6
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 5.4e-15 84.7 77 51.9
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 1.6e-14 83.2 60 68.3
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 8.1e-11 70.9 76 48.7
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 1.2e-09 67.0 57 61.4
COL.COLO4_37022 Corchorus olitorius HOM05D006666 ORTHO05D008276 3.4e-09 65.5 52 63.5
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 2.2e-08 62.8 43 62.8
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 2.9e-08 62.4 47 53.2


User provided reference genes

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