Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g029570 Solanum pennellii HOM05D008200 ORTHO05D010849 4.0e-115 417.9 186 100.0
Solyc03g020050.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 7.5e-114 413.7 186 99.5
PGSC0003DMG400015290 Solanum tuberosum HOM05D008200 ORTHO05D010849 3.4e-106 388.3 186 92.5
PGSC0003DMG400015289 Solanum tuberosum HOM05D008200 ORTHO05D010849 3.9e-94 348.2 189 82.5
PGSC0003DMG400004548 Solanum tuberosum HOM05D008200 ORTHO05D010849 5.1e-94 347.8 189 83.1
Sopen03g029540 Solanum pennellii HOM05D008200 ORTHO05D010849 2.1e-92 342.4 189 81.5
Solyc03g020060.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.6e-90 335.5 189 79.4
CAN.G2197.1 Capsicum annuum HOM05D008200 ORTHO05D010849 3.8e-89 331.6 174 82.2
Nitab4.5_0003324g0100 Nicotiana tabacum HOM05D008200 ORTHO05D010849 4.6e-87 324.7 172 79.7
Nitab4.5_0000363g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.0e-86 323.6 172 80.2
CAN.G861.41 Capsicum annuum HOM05D008200 ORTHO05D010849 9.6e-77 290.4 171 73.7
CAN.G861.42 Capsicum annuum HOM05D008200 ORTHO05D010849 3.4e-74 282.0 169 72.8
Sopen03g029600 Solanum pennellii HOM05D008200 ORTHO05D010849 2.7e-71 272.3 165 71.5
PGSC0003DMG400039762 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.7e-71 272.3 184 65.8
Solyc03g020040.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.0e-70 270.4 165 70.9
PGSC0003DMG400015287 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.3e-70 270.0 165 70.3
Solyc03g020030.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.3e-70 269.2 165 70.3
Solyc03g020070.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.7e-60 236.5 130 77.7
Sopen03g029560 Solanum pennellii HOM05D008200 ORTHO05D010849 2.8e-60 235.7 129 79.1
PGSC0003DMG400004547 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.8e-59 233.0 129 78.3
Solyc03g020080.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 3.4e-58 228.8 129 76.7
Sopen03g029530 Solanum pennellii HOM05D008200 ORTHO05D010849 2.5e-56 222.6 117 80.3
PGSC0003DMG400030593 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.4e-54 216.9 127 74.8
Nitab4.5_0010009g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.1e-51 207.2 186 49.5
CAN.G861.46 Capsicum annuum HOM05D008200 ORTHO05D010849 1.2e-50 203.8 181 52.5
Nitab4.5_0014015g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 2.0e-50 203.0 177 53.7
CAN.G861.44 Capsicum annuum HOM05D008200 ORTHO05D010849 8.2e-44 181.0 155 52.9
Peaxi162Scf00391g00728 Petunia axillaris HOM05D008200 ORTHO05D010849 7.0e-43 177.9 207 45.4
Solyc11g020990.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.3e-41 173.7 200 46.5
Solyc11g021060.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.9e-41 172.6 199 42.7
Nitab4.5_0004437g0040 Nicotiana tabacum HOM05D008200 ORTHO05D010849 5.2e-38 161.8 214 39.7
Sopen03g029590 Solanum pennellii HOM05D008200 ORTHO05D010849 5.3e-35 151.8 109 65.1
Peaxi162Scf00391g00620 Petunia axillaris HOM05D008200 ORTHO05D010849 1.1e-32 144.1 175 41.7
Sopen11g011140 Solanum pennellii HOM05D008200 ORTHO05D010849 1.5e-32 143.7 131 55.0
Nitab4.5_0005255g0020 Nicotiana tabacum HOM05D008200 ORTHO05D010849 4.2e-32 142.1 130 53.8
Solyc11g020960.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 4.4e-29 132.1 129 54.3
PGSC0003DMG400009267 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.4e-27 126.3 129 51.9
Sopen11g011150 Solanum pennellii HOM05D008200 ORTHO05D010849 1.5e-24 117.1 128 46.9
Peaxi162Scf00071g00435 Petunia axillaris HOM05D008200 ORTHO05D010849 2.5e-24 116.3 132 40.9
Solyc03g098795.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.8e-23 112.8 122 46.7
Sopen03g029580 Solanum pennellii HOM05D008200 ORTHO05D010849 1.0e-22 110.9 76 57.9
Peaxi162Scf00391g00729 Petunia axillaris HOM05D008200 ORTHO05D007342 2.1e-15 86.7 56 66.1
PGSC0003DMG400002110 Solanum tuberosum HOM05D008200 ORTHO05D007342 8.0e-15 84.7 54 66.7
Solyc03g031895.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 1.4e-14 84.0 60 60.0
CAN.G201.41 Capsicum annuum HOM05D008200 ORTHO05D007342 1.8e-14 83.6 54 63.0
Solyc11g021020.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.8e-14 83.6 85 41.2
PGSC0003DMG400024067 Solanum tuberosum HOM05D008200 ORTHO05D007342 2.3e-14 83.2 56 62.5
Solyc06g065073.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 4.0e-14 82.4 56 62.5
Sopen06g023600 Solanum pennellii HOM05D008200 ORTHO05D010849 4.0e-14 82.4 56 62.5
PGSC0003DMG400024075 Solanum tuberosum HOM05D008200 ORTHO05D007342 5.2e-14 82.0 56 60.7
CAN.G201.40 Capsicum annuum HOM05D008200 ORTHO05D007342 1.5e-13 80.5 51 66.7
Nitab4.5_0005382g0020 Nicotiana tabacum HOM05D008200 ORTHO05D007342 1.5e-13 80.5 58 58.6
Peaxi162Scf00071g00049 Petunia axillaris HOM05D008200 ORTHO05D007342 2.0e-13 80.1 58 56.9
PGSC0003DMG400031328 Solanum tuberosum HOM05D008200 ORTHO05D007342 2.0e-13 80.1 56 60.7
Peaxi162Scf00071g00425 Petunia axillaris HOM05D008200 ORTHO05D007342 7.5e-13 78.2 54 57.4
CAN.G508.19 Capsicum annuum HOM05D008200 ORTHO05D007342 9.8e-13 77.8 56 57.1
Peaxi162Scf00268g00024 Petunia axillaris HOM05D008200 ORTHO05D007342 1.7e-12 77.0 56 58.9
Peaxi162Scf00391g00730 Petunia axillaris HOM05D008200 ORTHO05D007342 4.9e-12 75.5 56 60.7
Peaxi162Scf00391g00074 Petunia axillaris HOM05D008200 ORTHO05D007342 1.1e-11 74.3 56 53.6
Nitab4.5_0006133g0030 Nicotiana tabacum HOM05D008200 ORTHO05D007342 9.2e-11 71.2 51 58.8
PGSC0003DMG400009268 Solanum tuberosum HOM05D008200 ORTHO05D010849 3.5e-10 69.3 91 35.2
Solyc06g061210.4 Solanum lycopersicum HOM05D001063 ORTHO05D000986 5.0e-09 65.5 41 68.3
Haze_21289 Corylus avellana HOM05D017027 ORTHO05D007342 1.5e-08 63.9 56 50.0
Solyc07g054720.2 Solanum lycopersicum HOM05D008200 ORTHO05D007342 1.9e-08 63.5 60 46.7
PGSC0003DMG400018328 Solanum tuberosum HOM05D008200 ORTHO05D007342 4.3e-08 62.4 60 45.0
Sopen07g028650 Solanum pennellii HOM05D008200 ORTHO05D010849 2.1e-07 60.1 60 43.3
Psat7g225920 Pisum sativum HOM05D007628 ORTHO05D007342 4.7e-07 58.9 55 49.1
Sc01g0001910 Simmondsia chinensis HOM05D007628 ORTHO05D007342 4.7e-07 58.9 51 54.9
Prupe.1G552600 Prunus persica HOM05D007628 ORTHO05D007342 6.2e-07 58.5 52 50.0
arahy.Tifrunner.gnm1.ann1.GT4ITC Arachis hypogaea HOM05D007628 ORTHO05D007342 8.0e-07 58.2 64 48.4
CAN.G308.48 Capsicum annuum HOM05D007628 ORTHO05D007342 8.0e-07 58.2 55 50.9
TPR.G34119 Trifolium pratense HOM05D007628 ORTHO05D007342 1.1e-06 57.8 53 50.9
Cc10_g10210 Coffea canephora HOM05D007628 ORTHO05D007342 1.4e-06 57.4 55 49.1
arahy.Tifrunner.gnm1.ann1.L82REB Arachis hypogaea HOM05D007628 ORTHO05D007342 2.3e-06 56.6 64 46.9
Medtr4g032865 Medicago truncatula HOM05D007628 ORTHO05D007342 3.1e-06 56.2 52 51.9
RcHm_v2.0_Chr7g0228221 Rosa chinensis HOM05D007628 ORTHO05D007342 3.1e-06 56.2 63 47.6
Cc00_g22140 Coffea canephora HOM05D007628 ORTHO05D007342 4.0e-06 55.8 55 49.1
Migut.C01297 Erythranthe guttata HOM05D007628 ORTHO05D007342 4.0e-06 55.8 38 65.8
Lalb_Chr20g0108111 Lupinus albus HOM05D007628 ORTHO05D007342 4.0e-06 55.8 62 45.2
unitig_8.g5066 Utricularia gibba HOM05D007628 ORTHO05D007342 4.0e-06 55.8 51 43.1
Lalb_Chr25g0283251 Lupinus albus HOM05D007628 ORTHO05D007342 5.2e-06 55.5 57 47.4


User provided reference genes

Program Settings