Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g028190 Solanum pennellii HOM05D007269 ORTHO05D008531 7.1e-105 384.0 205 100.0
Solyc03g097430.1 Solanum lycopersicum HOM05D007269 ORTHO05D008531 4.4e-91 338.2 219 87.7
PGSC0003DMG400026484 Solanum tuberosum HOM05D007269 ORTHO05D008531 1.8e-84 316.2 226 78.8
CAN.G732.21 Capsicum annuum HOM05D007269 ORTHO05D008531 2.1e-64 249.6 222 68.9
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 3.0e-55 219.2 236 56.8
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 1.8e-52 209.9 225 58.7
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.0e-23 114.4 206 39.8
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 7.5e-22 108.2 205 36.6
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 9.8e-22 107.8 212 39.6
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 1.4e-20 104.0 203 39.4
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 4.1e-20 102.4 208 38.0
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 7.0e-20 101.7 205 39.0
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 4.5e-19 99.0 214 35.0
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 4.5e-19 99.0 200 38.5
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 7.7e-19 98.2 204 37.3
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 2.9e-18 96.3 196 35.2
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 2.9e-18 96.3 210 32.9
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 6.5e-18 95.1 204 36.8
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 6.5e-18 95.1 95 48.4
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 1.1e-17 94.4 210 34.3
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 1.1e-17 94.4 210 34.8
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 2.5e-17 93.2 210 34.3
HanXRQChr09g0273431 Helianthus annuus HOM05D007269 ORTHO05D008531 2.5e-17 93.2 210 35.2
Lsat_1_v5_gn_4_82360 Lactuca sativa HOM05D007269 ORTHO05D008531 1.2e-16 90.9 219 36.5
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 1.2e-16 90.9 205 33.2
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 1.6e-16 90.5 203 35.0
DCAR_021637 Daucus carota HOM05D007269 ORTHO05D008531 2.1e-16 90.1 231 33.3
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 3.6e-16 89.4 223 32.3
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 8.0e-16 88.2 194 36.1
MD14G1153300 Malus domestica HOM05D007269 ORTHO05D008531 4.0e-15 85.9 214 32.7
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 5.2e-15 85.5 241 30.3
Prupe.5G148200 Prunus persica HOM05D007269 ORTHO05D008531 6.8e-15 85.1 213 34.3
DCAR_021638 Daucus carota HOM05D007269 ORTHO05D008531 8.8e-15 84.7 234 29.9
CiPaw.11G004900 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.5e-14 84.0 204 36.3
FAN13G1779 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.0e-14 83.6 220 34.1
RcHm_v2.0_Chr7g0189701 Rosa chinensis HOM05D007269 ORTHO05D008531 3.4e-14 82.8 220 32.7
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 5.7e-14 82.0 237 29.5
MD06G1137900 Malus domestica HOM05D007269 ORTHO05D008531 9.8e-14 81.3 212 34.9
Sc22g0003750 Simmondsia chinensis HOM05D007269 ORTHO05D008531 2.2e-13 80.1 213 30.5
ECA232G3539 Erigeron canadensis HOM05D007269 ORTHO05D008531 3.7e-13 79.3 96 44.8
Cpa.g.sc4.165 Carica papaya HOM05D007269 ORTHO05D008531 4.9e-13 79.0 202 32.7
HanXRQChr08g0236471 Helianthus annuus HOM05D007269 ORTHO05D008531 4.9e-13 79.0 224 33.5
FAN08G0669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.4e-12 77.4 222 33.8
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 2.4e-12 76.6 215 32.6
Lalb_Chr13g0297191 Lupinus albus HOM05D007269 ORTHO05D008531 3.1e-12 76.3 207 31.4
FvH4_5g08680 Fragaria vesca HOM05D007269 ORTHO05D008531 4.1e-12 75.9 222 32.0
FAN18G2199 Fragaria x ananassa HOM05D007269 ORTHO05D008531 4.1e-12 75.9 222 32.0
FAN28G2669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 5.4e-12 75.5 218 33.0
MSTRG.7284 Avicennia marina HOM05D007269 ORTHO05D008531 1.2e-11 74.3 234 30.8
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 1.6e-11 73.9 217 32.3
HanXRQChr05g0153821 Helianthus annuus HOM05D007269 ORTHO05D008531 2.7e-11 73.2 226 29.2
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 3.5e-11 72.8 206 33.0
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 3.5e-11 72.8 208 31.2
Lj4g0016206 Lotus japonicus HOM05D007269 ORTHO05D008531 3.5e-11 72.8 208 29.3
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 3.5e-11 72.8 216 30.1
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 5.9e-11 72.0 101 34.7
FAN06G3947 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.0e-10 71.2 218 31.7
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 8.6e-10 68.2 215 31.6
Potri.003G168200 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.5e-09 67.4 102 41.2
Zm00001eb364140 Zea mays HOM05D007269 ORTHO05D008531 2.5e-09 66.6 204 30.4
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 4.3e-09 65.9 205 29.8
Phvul.002G285300 Phaseolus vulgaris HOM05D007269 ORTHO05D008531 4.3e-09 65.9 207 28.0
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 1.2e-08 64.3 216 29.6
Cfa018768 Carpinus fangiana HOM05D007269 ORTHO05D008531 1.6e-08 63.9 172 32.0
Gorai.002G023300 Gossypium raimondii HOM05D007269 ORTHO05D008531 2.1e-08 63.5 184 34.8
Gohir.A01G022800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 2.8e-08 63.2 163 35.6
TAR622G0366 Trochodendron aralioides HOM05D007269 ORTHO05D008531 2.8e-08 63.2 167 31.7
Rhsim12G0177300 Rhododendron simsii HOM05D007269 ORTHO05D008531 4.7e-08 62.4 76 46.1
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 1.4e-07 60.8 216 30.1
CANSAT01G1989 Cannabis sativa HOM05D007269 ORTHO05D008531 1.8e-07 60.5 233 27.9
Migut.K01007 Erythranthe guttata HOM05D007269 ORTHO05D008531 3.0e-07 59.7 230 29.6
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 5.2e-07 58.9 239 28.0
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 6.8e-07 58.5 238 28.2
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 6.8e-07 58.5 216 28.2
TPR.G28777 Trifolium pratense HOM05D007269 ORTHO05D008531 7.5e-06 55.1 216 28.7
Haze_07172 Corylus avellana HOM05D007269 ORTHO05D008531 9.8e-06 54.7 180 31.7


User provided reference genes

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