Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g028120 Solanum pennellii HOM05D006461 ORTHO05D008199 2.7e-83 312.0 161 100.0
Solyc03g097360.3 Solanum lycopersicum HOM05D006461 ORTHO05D008199 2.5e-81 305.4 161 98.1
PGSC0003DMG400026478 Solanum tuberosum HOM05D006461 ORTHO05D008199 3.4e-78 295.0 161 94.4
Peaxi162Scf00516g00428 Petunia axillaris HOM05D006461 ORTHO05D008199 1.6e-67 259.6 157 84.1
Nitab4.5_0005545g0020 Nicotiana tabacum HOM05D006461 ORTHO05D008199 4.3e-65 251.5 156 82.7
Nitab4.5_0000021g0870 Nicotiana tabacum HOM05D006461 ORTHO05D008199 5.6e-65 251.1 156 82.1
CAN.G732.29 Capsicum annuum HOM05D006461 ORTHO05D008199 1.8e-63 246.1 163 82.8
Cfa016120 Carpinus fangiana HOM05D006461 ORTHO05D008199 3.1e-39 165.6 111 80.2
Manes.08G158500 Manihot esculenta HOM05D006461 ORTHO05D008199 1.5e-38 163.3 113 74.3
SalBow2G0694 Salvia bowleyana HOM05D006461 ORTHO05D008199 1.5e-38 163.3 162 59.9
Cc02_g00020 Coffea canephora HOM05D006461 ORTHO05D008199 2.0e-38 162.9 159 59.7
TAR375G0815 Trochodendron aralioides HOM05D006461 ORTHO05D008199 3.4e-38 162.2 165 61.8
Nn3g19117 Nelumbo nucifera HOM05D006461 ORTHO05D008199 4.5e-38 161.8 164 56.7
PSO063G2738 Papaver somniferum HOM05D006461 ORTHO05D008199 4.5e-38 161.8 108 79.6
Atru.chr2.1733 Acer truncatum HOM05D006461 ORTHO05D008199 1.7e-37 159.8 164 57.9
arahy.Tifrunner.gnm1.ann1.W7YZT9 Arachis hypogaea HOM05D006461 ORTHO05D008199 1.7e-37 159.8 131 66.4
Gohir.D13G163800 Gossypium hirsutum HOM05D006461 ORTHO05D008199 2.2e-37 159.5 102 78.4
arahy.Tifrunner.gnm1.ann1.8SK5FU Arachis hypogaea HOM05D006461 ORTHO05D008199 2.9e-37 159.1 101 80.2
Hma1.2p1_0074F.1_g039100 Hydrangea macrophylla HOM05D006461 ORTHO05D008199 2.9e-37 159.1 167 58.7
Gorai.013G199400 Gossypium raimondii HOM05D006461 ORTHO05D008199 3.8e-37 158.7 102 78.4
Lsat_1_v5_gn_9_48000 Lactuca sativa HOM05D006461 ORTHO05D008199 6.5e-37 157.9 170 54.7
Actinidia08786 Actinidia chinensis HOM05D006461 ORTHO05D008199 1.1e-36 157.1 169 55.0
Lj6g0024347 Lotus japonicus HOM05D006461 ORTHO05D008199 1.1e-36 157.1 97 81.4
unitig_62.g23822 Utricularia gibba HOM05D006461 ORTHO05D008199 1.1e-36 157.1 105 78.1
DCAR_020437 Daucus carota HOM05D006461 ORTHO05D008199 1.4e-36 156.8 155 56.8
Dinv19309 Davidia involucrata HOM05D006461 ORTHO05D008199 1.4e-36 156.8 167 55.1
Duzib106G1824 Durio zibethinus HOM05D006461 ORTHO05D008199 1.4e-36 156.8 100 77.0
Aqoxy3G01574 Aquilegia oxysepala HOM05D006461 ORTHO05D008199 2.5e-36 156.0 98 81.6
ClCG01G005420 Citrullus lanatus HOM05D006461 ORTHO05D008199 2.5e-36 156.0 105 76.2
Prupe.1G398900 Prunus persica HOM05D006461 ORTHO05D008199 3.2e-36 155.6 106 73.6
Medtr1g040145 Medicago truncatula HOM05D006461 ORTHO05D008199 4.2e-36 155.2 110 71.8
Gohir.A13G158700 Gossypium hirsutum HOM05D006461 ORTHO05D008199 5.5e-36 154.8 102 75.5
Thecc.05G228900 Theobroma cacao HOM05D006461 ORTHO05D008199 5.5e-36 154.8 100 77.0
MELO3C005387.2 Cucumis melo HOM05D006461 ORTHO05D008199 7.1e-36 154.5 105 75.2
CsaV3_5G005660 Cucumis sativus L. HOM05D006461 ORTHO05D008199 7.1e-36 154.5 105 75.2
QL09p005902 Quercus lobata HOM05D006461 ORTHO05D008199 7.1e-36 154.5 109 73.4
Sed0021956 Sechium edule HOM05D006461 ORTHO05D008199 9.3e-36 154.1 97 80.4
SGA_v2.0_scaffold51G18860 Striga asiatica HOM05D006461 ORTHO05D008199 1.2e-35 153.7 158 55.1
Ca_26296_v3 Cicer arietinum L. HOM05D006461 ORTHO05D008199 2.1e-35 152.9 98 78.6
Manes.09G131300 Manihot esculenta HOM05D006461 ORTHO05D008199 4.6e-35 151.8 100 76.0
Rhsim03G0225700 Rhododendron simsii HOM05D006461 ORTHO05D008199 4.6e-35 151.8 170 54.7
ECA232G1267 Erigeron canadensis HOM05D006461 ORTHO05D008199 6.0e-35 151.4 163 54.6
Migut.F00927 Erythranthe guttata HOM05D006461 ORTHO05D008199 6.0e-35 151.4 117 69.2
Glyma.02G000900 Glycine max HOM05D006461 ORTHO05D008199 6.0e-35 151.4 98 78.6
Psat6g101920 Pisum sativum HOM05D006461 ORTHO05D008199 6.0e-35 151.4 97 78.4
Cc11_g04930 Coffea canephora HOM05D006461 ORTHO05D008199 1.3e-34 150.2 159 55.3
RcHm_v2.0_Chr4g0406641 Rosa chinensis HOM05D006461 ORTHO05D008199 1.8e-34 149.8 101 75.2
MSTRG.8560 Avicennia marina HOM05D006461 ORTHO05D008199 3.0e-34 149.1 157 57.3
FAN12G0004 Fragaria x ananassa HOM05D006461 ORTHO05D008199 3.9e-34 148.7 101 74.3
FAN17G2347 Fragaria x ananassa HOM05D006461 ORTHO05D008199 3.9e-34 148.7 101 74.3
Potri.013G074100 Populus trichocarpa HOM05D006461 ORTHO05D008199 3.9e-34 148.7 101 76.2
TPR.G30220 Trifolium pratense HOM05D006461 ORTHO05D008199 3.9e-34 148.7 97 78.4
VMungo0720G0947 Vigna mungo HOM05D006461 ORTHO05D008199 5.1e-34 148.3 98 76.5
CDE12G0687 Ceratophyllum demersum HOM05D006461 ORTHO05D008199 6.7e-34 147.9 135 62.2
Ciclev10032825m.g Citrus clementina HOM05D006461 ORTHO05D008199 6.7e-34 147.9 98 77.6
FvH4_4g10840 Fragaria vesca HOM05D006461 ORTHO05D008199 8.7e-34 147.5 100 74.0
CiPaw.06G037900 Carya illinoinensis HOM05D006461 ORTHO05D008199 1.9e-33 146.4 108 73.1
CANSAT54G2891 Cannabis sativa HOM05D006461 ORTHO05D008199 2.5e-33 146.0 114 67.5
CiPaw.05G210400 Carya illinoinensis HOM05D006461 ORTHO05D008199 3.3e-33 145.6 100 75.0
PGR119G0757 Punica granatum HOM05D006461 ORTHO05D008199 3.3e-33 145.6 121 65.3
Mapoly0098s0024 Marchantia polymorpha HOM05D006461 ORTHO05D008199 1.3e-32 143.7 94 76.6
TWI32G0808 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 1.3e-32 143.7 174 51.7
MD08G1049500 Malus domestica HOM05D006461 ORTHO05D008199 1.6e-32 143.3 158 51.3
Phvul.007G281100 Phaseolus vulgaris HOM05D006461 ORTHO05D008199 2.2e-32 142.9 97 74.2
MD15G1045100 Malus domestica HOM05D006461 ORTHO05D008199 2.8e-32 142.5 163 51.5
SEGI_06006 Sequoiadendron giganteum HOM05D006461 ORTHO05D008199 3.7e-32 142.1 162 51.9
HanXRQChr05g0140271 Helianthus annuus HOM05D006461 ORTHO05D008199 4.8e-32 141.7 100 74.0
Ah.08g222190 Amaranthus hybridus HOM05D006461 ORTHO05D008199 8.2e-32 141.0 85 80.0
A10p21840 Brassica napus HOM05D006461 ORTHO05D008199 2.4e-31 139.4 95 73.7
Sc03g0004610 Simmondsia chinensis HOM05D006461 ORTHO05D008199 2.4e-31 139.4 121 65.3
Sp6g26660 Schrenkiella parvula HOM05D006461 ORTHO05D008199 9.0e-31 137.5 95 72.6
GSVIVG01024255001 Vitis vinifera HOM05D006461 ORTHO05D008199 1.2e-30 137.1 78 87.2
Os06g0484600 Oryza sativa ssp. japonica HOM05D006461 ORTHO05D008199 2.0e-30 136.3 104 68.3
AL6G28650 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 2.6e-30 136.0 95 71.6
BcaB01g05208 Brassica carinata HOM05D006461 ORTHO05D008199 2.6e-30 136.0 95 72.6
A03p08420 Brassica napus HOM05D006461 ORTHO05D008199 2.6e-30 136.0 95 72.6
C03p09820 Brassica napus HOM05D006461 ORTHO05D008199 2.6e-30 136.0 95 72.6
BolC3t13470H Brassica oleracea HOM05D006461 ORTHO05D008199 2.6e-30 136.0 95 72.6
BraA03t10165Z Brassica rapa HOM05D006461 ORTHO05D008199 2.6e-30 136.0 95 72.6
THA.LOC104802902 Tarenaya hassleriana HOM05D006461 ORTHO05D008199 2.6e-30 136.0 94 72.3
TWI60G1716 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 2.6e-30 136.0 102 69.6
EL10Ac7g16271 Beta vulgaris HOM05D006461 ORTHO05D008199 4.5e-30 135.2 83 79.5
BcaC04g18779 Brassica carinata HOM05D006461 ORTHO05D008199 4.5e-30 135.2 95 71.6
C09p59590 Brassica napus HOM05D006461 ORTHO05D008199 4.5e-30 135.2 95 71.6
BraA10t44244Z Brassica rapa HOM05D006461 ORTHO05D008199 4.5e-30 135.2 95 71.6
Haze_00341 Corylus avellana HOM05D006461 ORTHO05D000508 4.5e-30 135.2 153 54.9
Thhalv10014786m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 4.5e-30 135.2 95 71.6
BcaB01g04940 Brassica carinata HOM05D006461 ORTHO05D008199 5.9e-30 134.8 95 71.6
BcaB08g36762 Brassica carinata HOM05D006461 ORTHO05D008199 7.6e-30 134.4 95 71.6
Carub.0006s1580 Capsella rubella HOM05D006461 ORTHO05D008199 1.3e-29 133.7 95 71.6
CARHR195620 Cardamine hirsuta HOM05D006461 ORTHO05D008199 1.3e-29 133.7 95 71.6
AUR62001576 Chenopodium quinoa HOM05D006461 ORTHO05D008199 1.3e-29 133.7 87 74.7
Hund20961 Selenicereus undatus HOM05D006461 ORTHO05D008199 1.3e-29 133.7 84 78.6
AUR62020207 Chenopodium quinoa HOM05D006461 ORTHO05D008199 1.7e-29 133.3 103 67.0
BolC9t58798H Brassica oleracea HOM05D006461 ORTHO05D008199 2.2e-29 132.9 95 70.5
Aa31LG11G12100 Aethionema arabicum HOM05D006461 ORTHO05D008199 6.5e-29 131.3 93 69.9
Lj7P538T25 Lonicera japonica HOM05D006461 ORTHO05D008199 1.4e-28 130.2 77 83.1
Sabra13G0064300 Salix brachista HOM05D006461 ORTHO05D008199 1.4e-28 130.2 95 72.6
SMO358G0572 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 1.4e-28 130.2 99 68.7
AagrBONN_evm.TU.Sc2ySwM_117.1385 Anthoceros agrestis HOM05D006461 ORTHO05D008199 3.2e-28 129.0 119 58.8
Zm00001eb278180 Zea mays HOM05D006461 ORTHO05D008199 3.2e-28 129.0 101 68.3
Pp3c1_12810 Physcomitrium patens HOM05D006461 ORTHO05D008199 5.5e-28 128.3 113 61.1
Actinidia24631 Actinidia chinensis HOM05D006461 ORTHO05D008199 1.6e-27 126.7 81 79.0
HPP92_003741 Vanilla planifolia HOM05D001207 ORTHO05D007056 2.1e-27 126.3 74 83.8
Hund18806 Selenicereus undatus HOM05D006461 ORTHO05D008199 1.3e-24 117.1 84 66.7
Sed0001670 Sechium edule HOM05D006461 ORTHO05D008199 5.9e-22 108.2 117 53.8
Cre09.g394701 Chlamydomonas reinhardtii HOM05D006461 ORTHO05D008199 8.5e-21 104.4 102 55.9
PRCOL_00004611 Prasinoderma coloniale HOM05D006461 ORTHO05D008199 3.2e-20 102.4 100 52.0
SMO358G0215 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 3.9e-18 95.5 82 51.2
MCO16G354 Micromonas commoda HOM05D006461 ORTHO05D008199 9.7e-17 90.9 88 55.7
CSS0025765 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 1.3e-16 90.5 180 36.7
CSS0040075 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 1.3e-16 90.5 180 36.7
Eucgr.A02995 Eucalyptus grandis HOM05D006461 ORTHO05D008199 1.4e-15 87.0 49 83.7
Lalb_Chr19g0127781 Lupinus albus HOM05D006461 ORTHO05D008199 2.4e-15 86.3 48 87.5
SHI39095 Sapria himalayana HOM05D006461 ORTHO05D008199 6.5e-13 78.2 90 52.2
Actinidia28897 Actinidia chinensis HOM05D006461 ORTHO05D008199 1.2e-11 73.9 121 42.1
AL3G12640 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 5.3e-07 58.5 73 52.1
Cpa.g.sc2589.1 Carica papaya HOM05D006461 ORTHO05D008199 7.0e-07 58.2 50 62.0
AL3G12680 Arabidopsis lyrata HOM05D000403 ORTHO05D000350 1.2e-06 57.4 50 62.0
Thhalv10002241m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 2.0e-06 56.6 44 65.9


User provided reference genes

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