Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 1.0e-57 226.5 113 100.0
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 2.3e-57 225.3 113 99.1
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 9.7e-48 193.4 111 84.7
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.1e-46 189.9 111 83.8
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 8.5e-44 180.3 111 81.1
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 1.8e-41 172.6 111 74.8
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 3.0e-41 171.8 112 76.8
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 3.4e-40 168.3 111 73.9
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 7.5e-40 167.2 110 75.5
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 1.3e-39 166.4 111 73.0
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 6.3e-39 164.1 112 72.3
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 8.3e-39 163.7 112 74.1
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 1.1e-38 163.3 114 70.2
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 1.4e-38 162.9 112 74.1
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 2.4e-38 162.2 111 73.9
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 4.1e-38 161.4 111 72.1
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 9.1e-38 160.2 120 68.3
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 2.7e-37 158.7 112 67.9
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 4.5e-37 157.9 108 70.4
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 7.7e-37 157.1 112 72.3
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 1.0e-36 156.8 106 73.6
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 1.3e-36 156.4 120 65.8
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 6.5e-36 154.1 120 68.3
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 8.5e-36 153.7 106 73.6
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 8.5e-36 153.7 106 72.6
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 1.1e-35 153.3 106 74.5
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 1.9e-35 152.5 111 70.3
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 2.5e-35 152.1 106 71.7
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 3.2e-35 151.8 112 67.9
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 3.2e-35 151.8 112 71.4
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 4.2e-35 151.4 106 70.8
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 5.5e-35 151.0 106 70.8
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 5.5e-35 151.0 126 65.1
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 5.5e-35 151.0 106 72.6
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 5.5e-35 151.0 106 69.8
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 7.2e-35 150.6 105 71.4
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 9.5e-35 150.2 112 68.8
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 9.5e-35 150.2 108 71.3
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 1.2e-34 149.8 106 70.8
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 1.6e-34 149.4 125 61.6
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 2.1e-34 149.1 106 71.7
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 2.1e-34 149.1 112 67.9
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 2.1e-34 149.1 107 72.0
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 2.8e-34 148.7 112 67.9
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 2.8e-34 148.7 108 69.4
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 2.8e-34 148.7 114 65.8
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 2.8e-34 148.7 113 67.3
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 3.6e-34 148.3 112 67.9
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 3.6e-34 148.3 106 68.9
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 3.6e-34 148.3 109 70.6
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 4.7e-34 147.9 112 67.9
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 4.7e-34 147.9 104 72.1
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 4.7e-34 147.9 107 72.9
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 6.1e-34 147.5 106 68.9
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 6.1e-34 147.5 106 70.8
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 6.1e-34 147.5 102 73.5
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.0e-33 146.7 106 68.9
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 1.4e-33 146.4 106 70.8
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 1.4e-33 146.4 106 68.9
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.4e-33 146.4 106 68.9
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 1.8e-33 146.0 108 66.7
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 2.3e-33 145.6 112 66.1
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 3.0e-33 145.2 118 63.6
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 4.0e-33 144.8 104 71.2
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 4.0e-33 144.8 104 71.2
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 4.0e-33 144.8 115 67.8
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 4.0e-33 144.8 114 65.8
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 4.0e-33 144.8 106 68.9
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 5.2e-33 144.4 113 66.4
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 6.8e-33 144.1 114 64.9
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 8.8e-33 143.7 104 70.2
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 8.8e-33 143.7 165 53.3
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 1.2e-32 143.3 104 69.2
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.2e-32 143.3 106 67.9
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 1.2e-32 143.3 105 72.4
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 2.0e-32 142.5 114 64.9
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 2.0e-32 142.5 106 69.8
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 2.6e-32 142.1 108 69.4
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 2.6e-32 142.1 114 65.8
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 2.6e-32 142.1 114 65.8
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 3.4e-32 141.7 104 66.3
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 3.4e-32 141.7 114 66.7
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 3.4e-32 141.7 112 66.1
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 4.4e-32 141.4 113 64.6
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 4.4e-32 141.4 106 67.0
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 4.4e-32 141.4 104 69.2
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 7.5e-32 140.6 106 69.8
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 7.5e-32 140.6 106 67.9
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 1.3e-31 139.8 113 63.7
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 1.3e-31 139.8 113 63.7
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 1.3e-31 139.8 104 68.3
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 1.7e-31 139.4 104 65.4
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 2.2e-31 139.0 115 65.2
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 2.8e-31 138.7 94 70.2
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 6.3e-31 137.5 77 79.2
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 1.4e-30 136.3 113 62.8
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 2.4e-30 135.6 107 63.6
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 7.0e-30 134.0 66 93.9
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 1.0e-28 130.2 103 65.0
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 1.7e-28 129.4 66 90.9
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.7e-28 129.4 64 87.5
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 4.3e-27 124.8 104 63.5
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 9.5e-27 123.6 94 68.1
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 2.1e-26 122.5 88 64.8
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 6.1e-26 120.9 84 72.6
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 2.0e-24 115.9 71 70.4
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 1.7e-23 112.8 62 82.3
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 4.9e-23 111.3 64 81.2
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 8.3e-23 110.5 73 67.1
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 1.1e-22 110.2 114 52.6
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 3.2e-22 108.6 101 57.4
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 3.0e-20 102.1 72 69.4
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 1.4e-17 93.2 99 50.5
PGSC0003DMG400003144 Solanum tuberosum HOM05D006678 ORTHO05D008388 3.4e-16 88.6 49 98.0
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 7.5e-16 87.4 70 64.3
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 7.0e-14 80.9 106 46.2
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 7.8e-13 77.4 71 59.2
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 2.3e-12 75.9 69 65.2
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 6.6e-12 74.3 71 62.0
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 8.1e-10 67.4 38 71.1


User provided reference genes

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