Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 3.5e-57 224.9 130 100.0
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 2.5e-55 218.8 130 98.5
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 3.3e-47 191.8 130 87.7
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 6.4e-43 177.6 109 87.2
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 3.5e-41 171.8 157 65.0
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 7.3e-39 164.1 130 74.6
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 9.2e-34 147.1 130 71.5
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 2.1e-33 146.0 130 63.1
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 3.5e-33 145.2 130 62.3
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 6.0e-33 144.4 130 63.1
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 3.9e-32 141.7 109 72.5
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 2.1e-30 136.0 130 62.3
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 2.8e-30 135.6 109 71.6
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 4.7e-30 134.8 130 62.3
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 8.1e-30 134.0 129 59.7
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 8.1e-30 134.0 129 59.7
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 1.4e-29 133.3 130 63.1
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 2.3e-29 132.5 155 57.4
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 4.0e-29 131.7 130 60.0
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 6.8e-29 131.0 131 61.1
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 8.9e-29 130.6 129 60.5
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 2.6e-28 129.0 127 59.8
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 2.6e-28 129.0 109 68.8
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 3.4e-28 128.6 130 58.5
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 3.4e-28 128.6 133 58.6
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 4.4e-28 128.3 128 60.2
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 4.4e-28 128.3 130 58.5
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 9.9e-28 127.1 131 61.8
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 1.3e-27 126.7 128 59.4
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 2.2e-27 125.9 130 55.4
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 2.2e-27 125.9 130 59.2
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 2.2e-27 125.9 131 58.0
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 3.7e-27 125.2 130 60.8
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 4.9e-27 124.8 134 58.2
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 4.9e-27 124.8 135 62.2
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 1.1e-26 123.6 135 63.0
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 1.1e-26 123.6 134 58.2
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 2.4e-26 122.5 109 64.2
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 2.4e-26 122.5 129 54.3
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 4.1e-26 121.7 131 59.5
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 5.4e-26 121.3 132 56.1
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 5.4e-26 121.3 130 56.9
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 7.1e-26 120.9 130 56.9
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 7.1e-26 120.9 133 57.9
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 9.2e-26 120.6 130 57.7
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 9.2e-26 120.6 130 57.7
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 1.2e-25 120.2 132 59.8
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 1.6e-25 119.8 133 58.6
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 1.6e-25 119.8 130 57.7
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 2.7e-25 119.0 139 56.1
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 2.7e-25 119.0 130 58.5
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 7.8e-25 117.5 139 55.4
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 7.8e-25 117.5 130 53.8
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 7.8e-25 117.5 137 54.7
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 7.8e-25 117.5 159 47.8
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 1.3e-24 116.7 134 54.5
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 1.7e-24 116.3 130 58.5
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 1.7e-24 116.3 109 61.5
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 1.7e-24 116.3 128 55.5
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 2.3e-24 115.9 109 60.6
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 3.0e-24 115.5 130 61.5
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 5.1e-24 114.8 107 64.5
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 6.6e-24 114.4 131 56.5
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 6.6e-24 114.4 130 61.5
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 8.6e-24 114.0 101 63.4
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 1.1e-23 113.6 131 55.7
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 1.1e-23 113.6 131 55.7
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 1.9e-23 112.8 132 59.8
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 2.5e-23 112.5 109 60.6
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 2.5e-23 112.5 117 59.8
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 3.3e-23 112.1 130 54.6
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 3.3e-23 112.1 101 65.3
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 5.6e-23 111.3 130 54.6
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 7.3e-23 110.9 131 52.7
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 9.5e-23 110.5 130 50.8
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 1.2e-22 110.2 130 50.8
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 1.2e-22 110.2 130 58.5
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 1.6e-22 109.8 130 50.0
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 1.6e-22 109.8 130 50.8
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 1.6e-22 109.8 130 50.0
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 2.1e-22 109.4 130 56.2
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 2.1e-22 109.4 130 56.2
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 2.8e-22 109.0 130 50.0
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 6.2e-22 107.8 130 52.3
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 6.2e-22 107.8 130 51.5
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 6.2e-22 107.8 79 73.4
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 1.8e-21 106.3 79 72.2
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 1.8e-21 106.3 79 72.2
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 2.4e-21 105.9 130 49.2
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 2.4e-21 105.9 130 49.2
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 2.4e-21 105.9 130 49.2
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 3.1e-21 105.5 132 53.0
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 6.8e-21 104.4 94 61.7
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 1.2e-20 103.6 131 56.5
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 1.5e-20 103.2 79 68.4
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 1.5e-20 103.2 79 68.4
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 5.8e-20 101.3 130 53.8
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 3.8e-19 98.6 140 52.9
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 6.4e-19 97.8 134 49.3
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 3.2e-18 95.5 130 48.5
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 4.2e-18 95.1 82 63.4
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 1.2e-17 93.6 130 51.5
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 1.2e-17 93.6 132 46.2
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 2.1e-17 92.8 130 51.5
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 7.3e-15 84.3 136 42.6
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 2.8e-14 82.4 70 58.6
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 4.8e-14 81.6 109 46.8
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 3.8e-11 72.0 79 53.2
Pp3c13_5290 Physcomitrium patens HOM05D007045 ORTHO05D008872 8.7e-08 60.8 118 39.8
Pp3c4_15620 Physcomitrium patens HOM05D007045 ORTHO05D008872 3.6e-06 55.5 96 41.7


User provided reference genes

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