Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g026790 Solanum pennellii HOM05D003574 ORTHO05D002175 1.6e-161 572.8 301 100.0
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 6.3e-110 401.4 461 55.1
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 7.2e-82 308.1 271 63.8
PGSC0003DMG400045633 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.0e-72 275.8 276 56.9
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.9e-67 259.6 248 60.9
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 1.2e-65 254.2 391 45.8
Sopen03g014810 Solanum pennellii HOM05D003574 ORTHO05D002175 1.4e-61 240.7 377 46.2
PGSC0003DMG400043951 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.6e-60 235.7 249 55.4
PGSC0003DMG400031332 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.9e-54 216.5 233 54.9
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 7.5e-47 191.8 363 41.6
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.4e-45 187.6 261 49.8
Sopen12g023050 Solanum pennellii HOM05D003574 ORTHO05D002175 6.6e-43 178.7 183 62.8
Sopen10g019390 Solanum pennellii HOM05D003574 ORTHO05D002175 3.3e-42 176.4 239 51.9
PGSC0003DMG400023226 Solanum tuberosum HOM05D003574 ORTHO05D002175 6.8e-40 168.7 209 50.7
PGSC0003DMG400043149 Solanum tuberosum HOM05D003574 ORTHO05D002175 9.9e-39 164.9 90 88.9
Nitab4.5_0004446g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.8e-38 162.9 322 37.3
PGSC0003DMG400013728 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.4e-37 160.2 201 47.8
Nitab4.5_0003015g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-35 154.8 211 42.7
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 1.5e-31 141.0 96 84.4
PGSC0003DMG400030157 Solanum tuberosum HOM05D003574 ORTHO05D002175 5.8e-31 139.0 194 45.9
Nitab4.5_0000621g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.6e-31 138.7 294 34.0
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.8e-30 136.3 96 82.3
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-29 134.8 386 30.3
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 1.1e-29 134.8 95 84.2
PGSC0003DMG400023225 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.4e-29 133.7 96 80.2
PGSC0003DMG400045822 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.2e-29 132.9 94 83.0
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-28 131.3 298 32.6
Nitab4.5_0001512g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-28 131.0 274 32.8
PGSC0003DMG400013727 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.1e-28 130.6 96 78.1
PGSC0003DMG400001088 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.6e-28 129.4 93 79.6
Nitab4.5_0000065g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-27 126.7 274 32.5
Nitab4.5_0006582g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-27 126.7 259 34.4
Nitab4.5_0000161g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.6e-27 125.6 357 30.3
Nitab4.5_0002755g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.6e-27 125.6 300 32.3
PGSC0003DMG400043763 Solanum tuberosum HOM05D003574 ORTHO05D002175 6.6e-27 125.6 175 51.4
Nitab4.5_0013975g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-26 124.8 293 33.8
Nitab4.5_0003569g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.3e-26 122.9 351 30.2
Nitab4.5_0000015g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.2e-25 119.0 119 49.6
Nitab4.5_0003015g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.4e-24 117.1 336 31.5
Nitab4.5_0000679g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-23 114.0 223 36.8
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-22 110.9 391 28.9
Nitab4.5_0001960g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.9e-22 110.2 290 31.7
Nitab4.5_0002206g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.4e-22 109.0 98 51.0
Nitab4.5_0020094g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-21 107.8 116 48.3
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-21 107.5 298 29.2
PGSC0003DMG400044250 Solanum tuberosum HOM05D003574 ORTHO05D002175 9.3e-21 105.1 95 69.5
Nitab4.5_0001250g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-20 104.8 97 50.5
Nitab4.5_0012756g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-20 104.0 117 47.0
Nitab4.5_0000348g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.9e-19 99.8 120 43.3
Nitab4.5_0000442g0120 Nicotiana tabacum HOM05D003574 ORTHO05D012628 5.1e-19 99.4 298 30.9
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.7e-19 99.0 351 28.5
Nitab4.5_0000141g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.7e-19 98.6 377 28.1
Nitab4.5_0000053g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-18 97.1 252 30.6
Nitab4.5_0001384g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-18 97.1 357 28.0
Nitab4.5_0004998g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-18 97.1 336 28.3
Nitab4.5_0007583g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-18 97.1 103 45.6
Nitab4.5_0026749g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.3e-18 96.3 86 48.8
Nitab4.5_0000115g0150 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-17 94.7 244 32.0
Nitab4.5_0009418g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-17 94.7 85 52.9
Nitab4.5_0000199g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-17 94.0 184 35.3
Nitab4.5_0002884g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-17 94.0 107 44.9
Nitab4.5_0005115g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-17 94.0 268 30.6
Nitab4.5_0004469g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-17 93.6 98 45.9
Nitab4.5_0000645g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.2e-17 92.4 76 52.6
Nitab4.5_0000032g0310 Nicotiana tabacum HOM05D003574 ORTHO05D001773 3.1e-16 90.1 83 50.6
Nitab4.5_0009406g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.0e-16 89.7 77 53.2
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.3e-16 89.4 300 30.0
Nitab4.5_0001924g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-15 88.2 255 30.2
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-15 87.4 307 28.0
Nitab4.5_0001859g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.6e-15 87.0 77 51.9
Nitab4.5_0001057g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.4e-15 86.7 83 49.4
Nitab4.5_0004222g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.5e-15 86.3 75 52.0
Nitab4.5_0000857g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-14 84.7 120 45.0
Nitab4.5_0000417g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.8e-14 83.2 171 34.5
Nitab4.5_0009621g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-13 81.6 337 24.9
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-13 80.9 111 47.7
Nitab4.5_0003295g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-13 80.9 89 46.1
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-13 80.5 100 52.0
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.2e-13 80.1 332 25.6
Nitab4.5_0022150g0020 Nicotiana tabacum HOM05D003574 ORTHO05D012628 3.2e-13 80.1 307 26.7
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.3e-13 78.6 412 26.5
Nitab4.5_0010651g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-12 78.2 353 26.1
Nitab4.5_0001115g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-12 77.4 186 32.8
Nitab4.5_0005402g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-12 77.4 269 30.1
Nitab4.5_0000481g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-12 76.6 68 50.0
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.0e-12 75.9 446 25.8
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.0e-12 75.9 355 27.9
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-11 74.7 251 29.1
Nitab4.5_0000903g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-11 74.7 238 27.7
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-11 74.7 91 39.6
Nitab4.5_0002941g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-11 74.7 89 42.7
Nitab4.5_0000160g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-11 74.3 92 51.1
Nitab4.5_0003811g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-11 74.3 72 48.6
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-11 73.9 100 47.0
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.7e-11 72.4 367 27.2
Nitab4.5_0002690g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.7e-11 72.4 73 49.3
Nitab4.5_0002538g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-10 71.6 187 31.6
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-10 71.2 100 48.0
Nitab4.5_0000101g0410 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-10 70.9 224 29.9
Nitab4.5_0000512g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-10 70.9 72 47.2
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.3e-10 69.7 380 24.5
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 7.4e-10 68.9 89 38.2
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.6e-10 68.6 95 47.4
Nitab4.5_0002999g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-09 67.8 92 40.2
PGSC0003DMG400036224 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.6e-09 67.8 73 39.7
Nitab4.5_0001742g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-09 67.4 89 41.6
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.2e-09 65.5 379 24.3
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-08 65.1 256 27.7
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-08 65.1 100 46.0
Nitab4.5_0008368g0050 Nicotiana tabacum HOM05D003574 ORTHO05D001773 1.1e-08 65.1 54 53.7
Nitab4.5_0000362g0190 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-08 64.7 77 44.2
Nitab4.5_0001599g0160 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-08 64.7 72 44.4
Nitab4.5_0000141g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.1e-08 63.5 74 43.2
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.3e-08 62.8 156 35.9
Nitab4.5_0000022g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.0e-08 62.0 69 43.5
Nitab4.5_0000481g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.0e-08 62.0 77 48.1
Nitab4.5_0004620g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.0e-08 62.0 55 50.9
Nitab4.5_0000043g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.6e-07 60.5 55 49.1
Nitab4.5_0000841g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.5e-07 59.7 54 51.9
Nitab4.5_0003185g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-07 59.7 116 37.1
Nitab4.5_0022390g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.8e-07 59.3 184 30.4
Nitab4.5_0000667g0070 Nicotiana tabacum HOM05D003574 ORTHO05D001773 1.0e-06 58.5 137 32.8
Nitab4.5_0002359g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-06 57.4 269 27.5
Nitab4.5_0008600g0040 Nicotiana tabacum HOM05D003574 ORTHO05D010997 2.2e-06 57.4 73 41.1
SalBow2G3402 Salvia bowleyana HOM05D000995 ORTHO05D001773 2.2e-06 57.4 68 38.2
Nitab4.5_0006582g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.8e-06 56.6 111 39.6
Nitab4.5_0001215g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.9e-06 56.2 94 42.6
Nitab4.5_0001953g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.9e-06 56.2 53 47.2
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.9e-06 56.2 94 40.4
Nitab4.5_0007148g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.9e-06 56.2 40 62.5
SalBow6G5430 Salvia bowleyana HOM05D000995 ORTHO05D001773 4.9e-06 56.2 68 38.2
Nitab4.5_0000903g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.5e-06 55.8 64 53.1
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.5e-06 55.8 100 43.0


User provided reference genes

Program Settings