Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 9.1e-131 470.3 250 100.0
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 4.3e-120 434.9 251 93.6
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 5.4e-107 391.3 213 98.6
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 8.9e-94 347.4 249 76.7
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 1.9e-91 339.7 235 78.3
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 2.4e-83 312.8 203 83.3
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 2.5e-59 233.0 254 57.5
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 6.7e-57 224.9 253 56.5
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 2.5e-56 223.0 255 56.9
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 2.5e-56 223.0 253 55.3
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 2.8e-55 219.5 256 53.9
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 2.4e-54 216.5 225 55.1
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 2.4e-54 216.5 255 54.5
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 5.3e-54 215.3 255 55.7
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 3.4e-53 212.6 255 52.9
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 7.6e-53 211.5 255 52.2
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 7.6e-53 211.5 251 52.6
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 1.3e-52 210.7 242 54.1
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 1.7e-52 210.3 255 52.5
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 3.8e-52 209.1 253 54.2
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 8.5e-52 208.0 259 51.0
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 1.1e-51 207.6 239 54.4
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 1.4e-51 207.2 254 53.5
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 1.9e-51 206.8 251 53.8
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 1.9e-51 206.8 259 51.7
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 1.2e-50 204.1 257 51.0
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 2.7e-50 203.0 243 53.5
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 1.0e-49 201.1 256 50.8
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 1.3e-49 200.7 231 54.5
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 2.3e-49 199.9 252 50.4
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 3.0e-49 199.5 259 52.5
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 3.0e-49 199.5 259 52.5
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 5.1e-49 198.7 259 52.5
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 6.7e-49 198.4 246 51.2
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 8.7e-49 198.0 251 49.8
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.9e-48 196.8 251 50.6
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 5.7e-48 195.3 257 51.8
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 2.2e-47 193.4 250 51.6
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 2.8e-47 193.0 246 50.4
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 6.3e-47 191.8 254 50.0
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 8.2e-47 191.4 250 50.8
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 1.8e-46 190.3 252 51.2
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 2.4e-46 189.9 250 51.6
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 3.1e-46 189.5 256 50.4
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 6.9e-46 188.3 256 48.4
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 9.1e-46 188.0 249 47.4
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 2.6e-45 186.4 254 46.1
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 1.7e-44 183.7 252 52.0
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 2.5e-43 179.9 259 48.6
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 9.4e-43 177.9 264 47.0
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 2.1e-42 176.8 154 63.6
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 4.6e-42 175.6 244 48.4
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 6.1e-42 175.3 233 47.2
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 1.0e-41 174.5 260 48.1
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 2.3e-41 173.3 208 50.0
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 5.1e-41 172.2 197 53.8
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 5.1e-41 172.2 253 44.3
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 1.1e-40 171.0 250 44.8
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 2.6e-40 169.9 259 45.6
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 4.4e-40 169.1 233 48.1
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 1.3e-39 167.5 259 47.5
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 2.8e-39 166.4 202 52.0
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 2.8e-39 166.4 224 49.6
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 3.7e-39 166.0 258 47.3
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 4.8e-39 165.6 257 45.9
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 6.3e-39 165.2 231 46.8
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 8.2e-39 164.9 260 46.5
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 1.8e-38 163.7 136 62.5
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 2.4e-38 163.3 254 42.5
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 3.1e-38 162.9 104 77.9
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 3.1e-38 162.9 104 77.9
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 6.9e-38 161.8 132 66.7
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 6.9e-38 161.8 257 45.1
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 2.6e-37 159.8 260 45.8
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 3.8e-36 156.0 154 55.8
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 5.0e-36 155.6 229 48.0
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 1.1e-35 154.5 114 69.3
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 1.1e-35 154.5 114 69.3
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 1.1e-35 154.5 114 69.3
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 1.1e-35 154.5 114 69.3
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 1.4e-35 154.1 133 61.7
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 1.4e-35 154.1 148 58.1
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 1.4e-35 154.1 151 58.3
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 4.2e-35 152.5 125 65.6
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 7.2e-35 151.8 149 57.0
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 7.2e-35 151.8 149 57.0
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 7.2e-35 151.8 151 56.3
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 9.4e-35 151.4 149 57.0
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 1.2e-34 151.0 184 51.6
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 1.2e-34 151.0 113 69.0
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 2.1e-34 150.2 227 44.9
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 2.1e-34 150.2 166 52.4
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 3.6e-34 149.4 257 42.8
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 7.9e-34 148.3 205 45.4
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 7.9e-34 148.3 265 41.1
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 1.0e-33 147.9 166 52.4
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 1.8e-33 147.1 131 62.6
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 3.9e-33 146.0 152 55.3
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 5.2e-33 145.6 261 42.9
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 5.7e-32 142.1 176 51.1
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 3.7e-31 139.4 162 50.0
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 2.9e-28 129.8 177 48.0
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 1.9e-27 127.1 133 54.9
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 3.2e-27 126.3 205 42.4
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 1.3e-23 114.4 83 66.3
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 5.9e-21 105.5 207 40.6
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 8.0e-18 95.1 211 36.5
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 5.7e-16 89.0 172 41.9
Lj8C64T12 Lonicera japonica HOM05D007292 ORTHO05D009084 1.2e-10 71.2 164 37.2
Lsat_1_v5_gn_7_113640 Lactuca sativa HOM05D007823 ORTHO05D000174 4.0e-09 66.2 63 57.1
AagrBONN_evm.TU.Sc2ySwM_344.666 Anthoceros agrestis HOM05D007292 ORTHO05D009084 1.4e-06 57.8 130 32.3
Pp3c10_22900 Physcomitrium patens HOM05D033432 ORTHO05D009084 9.2e-06 55.1 205 31.7


User provided reference genes

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