Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g025590 Solanum pennellii HOM05D004876 ORTHO05D005488 4.2e-49 198.0 121 100.0
PGSC0003DMG400020604 Solanum tuberosum HOM05D004876 ORTHO05D005488 1.7e-37 159.5 106 96.2
CAN.G1229.8 Capsicum annuum HOM05D004876 ORTHO05D005488 4.5e-35 151.4 106 92.5
Nitab4.5_0006356g0050 Nicotiana tabacum HOM05D004876 ORTHO05D005488 1.0e-34 150.2 106 90.6
Nitab4.5_0000171g0270 Nicotiana tabacum HOM05D004876 ORTHO05D005488 6.6e-34 147.5 106 89.6
Peaxi162Scf00073g02225 Petunia axillaris HOM05D004876 ORTHO05D005488 4.3e-33 144.8 106 88.7
Dinv21858 Davidia involucrata HOM05D004876 ORTHO05D005488 1.5e-30 136.3 106 77.4
Oeu006067.1 Olea europaea HOM05D004876 ORTHO05D005488 2.6e-30 135.6 106 83.0
vmacro06902 Vaccinium macrocarpon HOM05D004876 ORTHO05D005488 3.4e-30 135.2 108 75.0
Nitab4.5_0008902g0030 Nicotiana tabacum HOM05D004876 ORTHO05D005488 9.8e-30 133.7 104 88.5
SGA_v2.0_scaffold2G00887 Striga asiatica HOM05D004876 ORTHO05D005488 1.3e-29 133.3 108 81.5
Cc02_g05210 Coffea canephora HOM05D004876 ORTHO05D005488 1.7e-29 132.9 106 84.0
Solyc05g052180.3 Solanum lycopersicum HOM05D004876 ORTHO05D005488 4.9e-29 131.3 104 82.7
GSVIVG01038577001 Vitis vinifera HOM05D004876 ORTHO05D005488 4.9e-29 131.3 106 80.2
PGSC0003DMG400011645 Solanum tuberosum HOM05D004876 ORTHO05D005488 6.4e-29 131.0 104 82.7
MSTRG.8381 Avicennia marina HOM05D004876 ORTHO05D005488 8.3e-29 130.6 106 82.1
Prupe.2G265600 Prunus persica HOM05D004876 ORTHO05D005488 8.3e-29 130.6 106 61.3
Sopen05g030710 Solanum pennellii HOM05D004876 ORTHO05D005488 8.3e-29 130.6 104 81.7
SalBow7G3110 Salvia bowleyana HOM05D004876 ORTHO05D005488 1.1e-28 130.2 106 82.1
Ca_29868_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 1.4e-28 129.8 106 60.4
Rhsim03G0153600 Rhododendron simsii HOM05D004876 ORTHO05D005488 1.4e-28 129.8 106 80.2
TWI53G0120 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 3.2e-28 128.6 106 69.8
Dinv37250 Davidia involucrata HOM05D004876 ORTHO05D005488 4.1e-28 128.3 106 80.2
EL10Ac5g10661 Beta vulgaris HOM05D004876 ORTHO05D005488 7.0e-28 127.5 106 71.7
Migut.F01232 Erythranthe guttata HOM05D004876 ORTHO05D005488 7.0e-28 127.5 106 63.2
HanXRQChr14g0460541 Helianthus annuus HOM05D004876 ORTHO05D005488 7.0e-28 127.5 106 79.2
Phvul.009G042700 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 1.2e-27 126.7 112 55.4
Thecc.10G185000 Theobroma cacao HOM05D004876 ORTHO05D005488 1.2e-27 126.7 106 72.6
TAR636G2293 Trochodendron aralioides HOM05D004876 ORTHO05D005488 1.2e-27 126.7 106 60.4
Duzib114G0677 Durio zibethinus HOM05D004876 ORTHO05D005488 1.6e-27 126.3 106 58.5
Lj8A52T23 Lonicera japonica HOM05D004876 ORTHO05D005488 2.0e-27 125.9 106 58.5
Lj1g0004349 Lotus japonicus HOM05D004876 ORTHO05D005488 2.0e-27 125.9 106 58.5
Psat5g069360 Pisum sativum HOM05D004876 ORTHO05D005488 2.0e-27 125.9 106 59.4
ECA247G1702 Erigeron canadensis HOM05D004876 ORTHO05D008274 2.7e-27 125.6 105 76.2
TPR.G13975 Trifolium pratense HOM05D004876 ORTHO05D005488 2.7e-27 125.6 106 61.3
CSS0007534 Camellia sinensis var. sinensis HOM05D004876 ORTHO05D005488 3.5e-27 125.2 106 77.4
Cpa.g.sc128.23 Carica papaya HOM05D004876 ORTHO05D005488 3.5e-27 125.2 106 60.4
arahy.Tifrunner.gnm1.ann1.58ULDB Arachis hypogaea HOM05D004876 ORTHO05D005488 4.6e-27 124.8 106 76.4
Lsat_1_v5_gn_5_104800 Lactuca sativa HOM05D004876 ORTHO05D005488 4.6e-27 124.8 105 79.0
Atru.chr12.194 Acer truncatum HOM05D004876 ORTHO05D005488 5.9e-27 124.4 106 57.5
VMungo1309G0380 Vigna mungo HOM05D004876 ORTHO05D005488 5.9e-27 124.4 106 58.5
Phvul.005G185900 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 7.8e-27 124.0 112 54.5
Lalb_Chr11g0067701 Lupinus albus HOM05D004876 ORTHO05D005488 1.3e-26 123.2 106 57.5
AUR62008150 Chenopodium quinoa HOM05D004876 ORTHO05D005488 1.7e-26 122.9 106 58.5
AUR62028732 Chenopodium quinoa HOM05D004876 ORTHO05D005488 1.7e-26 122.9 106 58.5
MBI15_g39395_MAGBIO Magnolia biondii HOM05D004876 ORTHO05D005488 1.7e-26 122.9 108 59.3
PSO170G6098 Papaver somniferum HOM05D004876 ORTHO05D005488 1.7e-26 122.9 106 58.5
Sabra19G0074800 Salix brachista HOM05D004876 ORTHO05D005488 2.3e-26 122.5 115 52.2
CiPaw.02G093900 Carya illinoinensis HOM05D004876 ORTHO05D005488 3.0e-26 122.1 106 58.5
CiPaw.04G175400 Carya illinoinensis HOM05D004876 ORTHO05D005488 3.0e-26 122.1 106 58.5
PSO675G4155 Papaver somniferum HOM05D004876 ORTHO05D005488 3.0e-26 122.1 106 57.5
Glyma.06G141500 Glycine max HOM05D004876 ORTHO05D005488 3.9e-26 121.7 106 58.5
TPR.G28952 Trifolium pratense HOM05D004876 ORTHO05D005488 3.9e-26 121.7 106 59.4
Medtr3g093790 Medicago truncatula HOM05D004876 ORTHO05D005488 5.0e-26 121.3 106 73.6
TWI09G0651 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 5.0e-26 121.3 111 56.8
Gohir.A10G177600 Gossypium hirsutum HOM05D004876 ORTHO05D005488 6.6e-26 120.9 106 75.5
Duzib106G1237 Durio zibethinus HOM05D004876 ORTHO05D005488 8.6e-26 120.6 106 74.5
COL.COLO4_19475 Corchorus olitorius HOM05D004876 ORTHO05D005488 1.1e-25 120.2 106 75.5
Gohir.D10G184200 Gossypium hirsutum HOM05D004876 ORTHO05D005488 1.1e-25 120.2 106 74.5
Gorai.011G206400 Gossypium raimondii HOM05D004876 ORTHO05D005488 1.1e-25 120.2 106 74.5
MD01G1169400 Malus domestica HOM05D004876 ORTHO05D005488 1.1e-25 120.2 106 53.8
Potri.019G061200 Populus trichocarpa HOM05D004876 ORTHO05D005488 1.1e-25 120.2 108 56.5
Ah.11g051130 Amaranthus hybridus HOM05D004876 ORTHO05D005488 3.3e-25 118.6 106 75.5
unitig_736.g22953 Utricularia gibba HOM05D004876 ORTHO05D005488 3.3e-25 118.6 106 71.7
PGR142G2846 Punica granatum HOM05D004876 ORTHO05D005488 4.3e-25 118.2 106 51.9
QL08p065087 Quercus lobata HOM05D004876 ORTHO05D005488 4.3e-25 118.2 109 58.7
Ciclev10032334m.g Citrus clementina HOM05D004876 ORTHO05D005488 5.6e-25 117.9 109 72.5
FAN12G2601 Fragaria x ananassa HOM05D004876 ORTHO05D005488 5.6e-25 117.9 106 55.7
ClCG07G004830 Citrullus lanatus HOM05D004876 ORTHO05D005488 7.3e-25 117.5 106 53.8
Sed0020097 Sechium edule HOM05D004876 ORTHO05D005488 7.3e-25 117.5 106 53.8
PGR142G0395 Punica granatum HOM05D004876 ORTHO05D005488 9.5e-25 117.1 106 71.7
FvH4_7g26120 Fragaria vesca HOM05D004876 ORTHO05D005488 1.2e-24 116.7 106 54.7
FAN10G2920 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.2e-24 116.7 106 54.7
Manes.10G044800 Manihot esculenta HOM05D004876 ORTHO05D005488 1.2e-24 116.7 106 70.8
RcHm_v2.0_Chr1g0372561 Rosa chinensis HOM05D004876 ORTHO05D005488 1.2e-24 116.7 106 54.7
ATR0733G227 Amborella trichopoda HOM05D004876 ORTHO05D005488 1.6e-24 116.3 106 53.8
CsaV3_5G010740 Cucumis sativus L. HOM05D004876 ORTHO05D005488 1.6e-24 116.3 106 52.8
CiPaw.04G175300 Carya illinoinensis HOM05D004876 ORTHO05D005488 2.1e-24 115.9 104 57.7
THA.LOC104824370 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 4.7e-24 114.8 105 53.3
Haze_17370 Corylus avellana HOM05D004876 ORTHO05D005488 6.2e-24 114.4 106 71.7
Os03g0114200 Oryza sativa ssp. japonica HOM05D004876 ORTHO05D005488 6.2e-24 114.4 106 53.8
FAN03G2458 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.0e-23 113.6 106 53.8
FAN17G0734 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.4e-23 113.2 115 50.4
Lj6g0009237 Lotus japonicus HOM05D004876 ORTHO05D005488 1.4e-23 113.2 106 73.6
ATR1127G178 Amborella trichopoda HOM05D004876 ORTHO05D005488 2.3e-23 112.5 106 52.8
FAN06G0183 Fragaria x ananassa HOM05D004876 ORTHO05D005488 2.3e-23 112.5 105 54.3
Ca_29506_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 3.1e-23 112.1 106 74.5
CANSAT64G1352 Cannabis sativa HOM05D004876 ORTHO05D005488 5.2e-23 111.3 106 51.9
CANSAT64G2122 Cannabis sativa HOM05D004876 ORTHO05D005488 5.2e-23 111.3 106 51.9
MELO3C020110.2 Cucumis melo HOM05D004876 ORTHO05D005488 5.2e-23 111.3 106 51.9
Lsat_1_v5_gn_2_126741 Lactuca sativa HOM05D004876 ORTHO05D005488 8.9e-23 110.5 101 78.2
Eucgr.G03147 Eucalyptus grandis HOM05D004876 ORTHO05D005488 2.0e-22 109.4 107 64.5
THA.LOC104803220 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 2.0e-22 109.4 106 66.0
FvH4_4g04970 Fragaria vesca HOM05D004876 ORTHO05D005488 1.3e-21 106.7 125 47.2
Zm00001eb000910 Zea mays HOM05D004876 ORTHO05D005488 1.7e-21 106.3 107 51.4
Ca_16858_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 8.3e-21 104.0 123 65.0
HPP92_015433 Vanilla planifolia HOM05D004876 ORTHO05D005488 1.1e-20 103.6 101 48.5
CDE07G1038 Ceratophyllum demersum HOM05D004876 ORTHO05D005488 1.4e-20 103.2 106 51.9
Aqoxy6G02070 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 4.1e-20 101.7 108 51.9
AL4G34450 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 4.1e-20 101.7 106 47.2
AL4G38670 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 4.1e-20 101.7 106 47.2
CARHR135880 Cardamine hirsuta HOM05D004876 ORTHO05D005488 4.1e-20 101.7 106 47.2
Sp4g23100 Schrenkiella parvula HOM05D004876 ORTHO05D005488 4.1e-20 101.7 106 47.2
BcaB06g29175 Brassica carinata HOM05D004876 ORTHO05D005488 5.4e-20 101.3 106 46.2
A04p31160 Brassica napus HOM05D004876 ORTHO05D005488 5.4e-20 101.3 106 46.2
C04p68560 Brassica napus HOM05D004876 ORTHO05D005488 5.4e-20 101.3 106 46.2
BolC4t28355H Brassica oleracea HOM05D004876 ORTHO05D005488 5.4e-20 101.3 106 46.2
BraA04t18571Z Brassica rapa HOM05D004876 ORTHO05D005488 5.4e-20 101.3 106 46.2
Thhalv10017311m.g Eutrema salsugineum HOM05D004876 ORTHO05D005488 5.4e-20 101.3 106 46.2
Migut.A00831 Erythranthe guttata HOM05D004876 ORTHO05D005488 7.0e-20 100.9 104 53.8
AT2G40780 Arabidopsis thaliana HOM05D004876 ORTHO05D005488 9.2e-20 100.5 106 46.2
Carub.0004s2308 Capsella rubella HOM05D004876 ORTHO05D005488 9.2e-20 100.5 106 46.2
Aa31LG3G1350 Aethionema arabicum HOM05D004876 ORTHO05D005488 2.7e-19 99.0 106 47.2
Aqoxy2G01672 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 3.5e-19 98.6 108 50.0
Peaxi162Scf00167g01129 Petunia axillaris HOM05D004876 ORTHO05D005488 3.0e-18 95.5 61 77.0
SEGI_18121 Sequoiadendron giganteum HOM05D004876 ORTHO05D005488 3.9e-18 95.1 110 43.6
BcaB01g03515 Brassica carinata HOM05D004876 ORTHO05D005488 1.1e-17 93.6 107 45.8
Aqoxy5G02193 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 4.3e-17 91.7 93 48.4
Nn2g10267 Nelumbo nucifera HOM05D004876 ORTHO05D005488 4.7e-16 88.2 80 58.8
Sc10g0003050 Simmondsia chinensis HOM05D004876 ORTHO05D005488 4.7e-16 88.2 52 73.1
Actinidia13638 Actinidia chinensis HOM05D004876 ORTHO05D005488 1.8e-15 86.3 48 77.1
Rhsim04G0113200 Rhododendron simsii HOM05D004876 ORTHO05D005488 3.1e-15 85.5 94 52.1
THA.LOC104808402 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 3.1e-15 85.5 52 69.2
Pp3c16_8280 Physcomitrium patens HOM05D004876 ORTHO05D005488 6.4e-13 77.8 113 41.6
BcaC02g12879 Brassica carinata HOM05D004876 ORTHO05D005488 1.1e-12 77.0 52 59.6
BcaB05g22749 Brassica carinata HOM05D004876 ORTHO05D005488 3.2e-12 75.5 52 59.6
HanXRQChr07g0204961 Helianthus annuus HOM05D004876 ORTHO05D005488 3.2e-12 75.5 43 76.7
Mapoly0014s0200 Marchantia polymorpha HOM05D004876 ORTHO05D005488 3.2e-12 75.5 107 40.2
TPR.G24790 Trifolium pratense HOM05D004876 ORTHO05D005488 4.6e-11 71.6 87 47.1
Nn1g06656 Nelumbo nucifera HOM05D004876 ORTHO05D005488 1.9e-09 66.2 42 71.4
Oeu039385.1 Olea europaea HOM05D002276 ORTHO05D002381 2.1e-08 62.8 66 84.8
AagrBONN_evm.TU.Sc2ySwM_368.2679 Anthoceros agrestis HOM05D004876 ORTHO05D005488 3.6e-08 62.0 106 34.9


User provided reference genes

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