Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g024940 Solanum pennellii HOM05D006864 ORTHO05D002765 5.8e-115 417.5 208 100.0
Sopen02g001070 Solanum pennellii HOM05D000017 ORTHO05D000013 2.0e-86 322.8 162 100.0
Sopen02g032130 Solanum pennellii HOM05D000629 ORTHO05D000013 2.0e-86 322.8 162 100.0
Sopen12g019990 Solanum pennellii HOM05D000017 ORTHO05D000013 2.0e-86 322.8 162 100.0
Sopen06g002940 Solanum pennellii HOM05D000017 ORTHO05D000013 7.4e-86 320.9 162 99.4
Sopen10g005080 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-85 320.1 162 98.8
Sopen05g006380 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-84 316.6 162 96.9
Sopen06g004330 Solanum pennellii HOM05D000017 ORTHO05D000013 5.3e-84 314.7 162 96.3
Sopen12g026640 Solanum pennellii HOM05D007248 ORTHO05D002765 1.2e-83 313.5 168 93.5
Sopen10g022230 Solanum pennellii HOM05D000017 ORTHO05D000013 4.2e-81 305.1 162 92.6
Sopen09g007640 Solanum pennellii HOM05D000017 ORTHO05D000013 1.0e-79 300.4 163 92.6
Sopen11g019130 Solanum pennellii HOM05D000047 ORTHO05D000589 5.7e-62 241.5 143 84.6
Sopen02g012130 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-58 229.9 162 75.9
Sopen01g037270 Solanum pennellii HOM05D000017 ORTHO05D000013 4.1e-52 208.8 164 62.2
Sopen11g029160 Solanum pennellii HOM05D000017 ORTHO05D000013 4.1e-52 208.8 164 62.2
Sopen06g004080 Solanum pennellii HOM05D000017 ORTHO05D000013 3.0e-50 202.6 164 59.8
Sopen04g019350 Solanum pennellii HOM05D006864 ORTHO05D000013 8.6e-50 201.1 162 59.9
Sopen09g012340 Solanum pennellii HOM05D006864 ORTHO05D000013 1.8e-47 193.4 164 58.5
Sopen03g030620 Solanum pennellii HOM05D000017 ORTHO05D000013 2.0e-46 189.9 164 57.9
Sopen05g013600 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-41 172.2 95 86.3
Sopen08g017470 Solanum pennellii HOM05D000017 ORTHO05D000013 2.8e-32 142.9 120 58.3
Sopen10g008530 Solanum pennellii HOM05D000017 ORTHO05D000013 6.0e-27 125.2 91 65.9
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.0e-22 110.2 98 50.0
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.4e-22 109.0 139 43.2
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-21 107.5 148 43.2
Nitab4.5_0006248g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.9e-21 106.3 98 48.0
PGSC0003DMG400009287 Solanum tuberosum HOM05D006864 ORTHO05D002765 1.9e-20 103.6 122 40.2
Nitab4.5_0000721g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.2e-20 102.4 97 48.5
Sopen04g034640 Solanum pennellii HOM05D000017 ORTHO05D002765 7.1e-20 101.7 53 94.3
Nitab4.5_0006628g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.3e-20 101.3 158 38.0
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.5e-19 99.4 158 36.7
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.0e-19 98.6 158 36.7
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.0e-18 97.8 165 37.0
Sopen07g019800 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-18 97.4 91 52.7
Nitab4.5_0001816g0240 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.9e-18 95.9 98 44.9
Nitab4.5_0000516g0080 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.1e-17 94.4 166 37.3
Nitab4.5_0020188g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.5e-17 94.0 98 44.9
Nitab4.5_0002373g0160 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.3e-17 92.8 182 35.7
Sopen05g009360 Solanum pennellii HOM05D000017 ORTHO05D002765 3.3e-17 92.8 62 79.0
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.6e-17 91.3 139 40.3
Nitab4.5_0006179g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.4e-15 87.4 98 44.9
Nitab4.5_0008791g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.4e-15 87.4 155 36.1
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 1.2e-14 84.3 100 35.0
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 1.5e-14 84.0 100 34.0
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.5e-14 82.4 102 36.3
Sopen07g021550 Solanum pennellii HOM05D000017 ORTHO05D000013 4.5e-14 82.4 78 60.3
Nitab4.5_0000425g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.6e-14 81.6 98 41.8
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.9e-14 81.3 118 29.7
Nitab4.5_0002993g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-13 80.9 155 35.5
Nitab4.5_0002461g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.2e-13 80.1 224 29.0
Peaxi162Scf00106g02222 Petunia axillaris HOM05D006864 ORTHO05D002765 6.4e-13 78.6 138 29.0
Peaxi162Scf00184g00211 Petunia axillaris HOM05D006864 ORTHO05D002765 8.4e-13 78.2 172 27.3
Solyc09g150133.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 1.1e-12 77.8 93 34.4
Solyc10g047821.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 1.4e-12 77.4 93 34.4
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-12 77.4 150 27.3
Peaxi162Scf00164g01221 Petunia axillaris HOM05D006864 ORTHO05D002765 1.9e-12 77.0 172 27.3
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.2e-12 76.3 98 34.7
SGA_v2.0_scaffold1G00045 Striga asiatica HOM05D010396 ORTHO05D002765 3.2e-12 76.3 116 37.1
Nitab4.5_0006009g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.1e-12 75.1 115 31.3
Nitab4.5_0011890g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.1e-12 75.1 81 44.4
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.3e-12 74.7 157 26.8
Nitab4.5_0024513g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.3e-12 74.7 137 37.2
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-11 74.3 158 28.5
Nitab4.5_0000829g0130 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-11 73.9 93 37.6
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.5e-11 72.8 92 35.9
SGA_v2.0_scaffold10G05133 Striga asiatica HOM05D015252 ORTHO05D002765 3.5e-11 72.8 110 32.7
Peaxi162Scf01226g00018 Petunia axillaris HOM05D006864 ORTHO05D000013 4.6e-11 72.4 99 33.3
Nitab4.5_0001030g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.0e-10 71.2 81 40.7
Nitab4.5_0003674g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-10 71.2 143 30.8
Nitab4.5_0004449g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.0e-10 71.2 73 46.6
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-10 70.9 92 35.9
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.9e-10 69.3 92 34.8
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.9e-10 69.3 168 31.0
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.1e-10 68.9 92 34.8
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.7e-10 68.6 155 27.1
Peaxi162Scf00006g03314 Petunia axillaris HOM05D006864 ORTHO05D002765 6.7e-10 68.6 99 34.3
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 8.7e-10 68.2 100 31.0
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 1.5e-09 67.4 134 26.9
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-09 67.4 92 34.8
Nitab4.5_0002951g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-09 67.0 168 25.0
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-09 67.0 92 34.8
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.5e-09 66.6 92 33.7
Nitab4.5_0001062g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.6e-09 65.5 96 34.4
Nitab4.5_0007069g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.6e-09 65.5 95 35.8
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.4e-09 65.1 156 28.2
Oeu009472.1 Olea europaea HOM05D012404 ORTHO05D002765 7.4e-09 65.1 104 28.8
Nitab4.5_0005199g0100 Nicotiana tabacum HOM05D006864 ORTHO05D000013 9.6e-09 64.7 106 32.1
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 9.6e-09 64.7 168 30.4
Nitab4.5_0000697g0250 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-08 64.3 92 32.6
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-08 64.3 96 33.3
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-08 64.3 157 28.0
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-08 63.9 105 31.4
Oeu019782.1 Olea europaea HOM05D012404 ORTHO05D002765 1.6e-08 63.9 104 28.8
Nitab4.5_0000036g0340 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.1e-08 63.5 74 41.9
Nitab4.5_0005474g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.1e-08 63.5 101 31.7
Oeu043717.1 Olea europaea HOM05D012404 ORTHO05D002765 2.1e-08 63.5 131 25.2
Oeu059246.1 Olea europaea HOM05D012404 ORTHO05D002765 2.1e-08 63.5 131 24.4
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.8e-08 63.2 95 34.7
Nitab4.5_0003586g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.8e-08 63.2 96 33.3
Nitab4.5_0011275g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.8e-08 63.2 92 34.8
Nitab4.5_0000425g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.7e-08 62.8 92 32.6
Oeu002184.1 Olea europaea HOM05D012404 ORTHO05D002765 3.7e-08 62.8 177 23.7
Oeu053795.1 Olea europaea HOM05D012404 ORTHO05D002765 3.7e-08 62.8 94 28.7
Oeu063037.1 Olea europaea HOM05D012404 ORTHO05D002765 3.7e-08 62.8 101 27.7
Nitab4.5_0000786g0280 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.8e-08 62.4 92 33.7
Nitab4.5_0004510g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.2e-08 62.0 74 43.2
Oeu038186.1 Olea europaea HOM05D012404 ORTHO05D002765 8.1e-08 61.6 138 29.0
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.1e-07 61.2 106 33.0
Nitab4.5_0004770g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.1e-07 61.2 191 28.3
Oeu016698.1 Olea europaea HOM05D000017 ORTHO05D000013 1.1e-07 61.2 138 26.8
CANSAT21G0992 Cannabis sativa HOM05D010396 ORTHO05D002765 1.4e-07 60.8 131 26.0
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 1.4e-07 60.8 130 26.2
Nitab4.5_0002430g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.4e-07 60.8 147 29.3
Nitab4.5_0004824g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-07 60.8 91 35.2
CANSAT54G1694 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-07 60.5 100 26.0
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 1.8e-07 60.5 131 26.0
Nitab4.5_0000034g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.8e-07 60.5 108 30.6
Nitab4.5_0003966g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.8e-07 60.5 95 32.6
CANSAT21G1471 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-07 60.1 175 20.0
Nitab4.5_0001140g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.4e-07 60.1 81 39.5
Nitab4.5_0010096g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.4e-07 60.1 96 31.2
CANSAT11G2629 Cannabis sativa HOM05D000017 ORTHO05D000013 3.1e-07 59.7 100 26.0
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 4.0e-07 59.3 175 18.9
CANSAT56G0158 Cannabis sativa HOM05D000003 ORTHO05D000004 5.3e-07 58.9 94 26.6
Nitab4.5_0000403g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 9.0e-07 58.2 129 30.2
CANSAT01G2679 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-06 57.8 99 27.3
CANSAT25G3317 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-06 57.8 99 27.3
CANSAT64G2574 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-06 57.8 99 27.3
Oeu034871.1 Olea europaea HOM05D000017 ORTHO05D000013 1.2e-06 57.8 73 39.7
Nitab4.5_0001439g0140 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.0e-06 57.0 162 25.9
Nitab4.5_0005249g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-06 57.0 96 32.3
SGA_v2.0_scaffold220G42613 Striga asiatica HOM05D015252 ORTHO05D002765 2.6e-06 56.6 91 24.2
Nitab4.5_0002534g0090 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.4e-06 56.2 166 27.1
Nitab4.5_0002297g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.5e-06 55.8 150 25.3
Nitab4.5_0006936g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.6e-06 55.1 133 28.6
CANSAT25G1873 Cannabis sativa HOM05D000017 ORTHO05D000013 9.9e-06 54.7 95 27.4
CANSAT54G1301 Cannabis sativa HOM05D012404 ORTHO05D002765 9.9e-06 54.7 95 27.4
CANSAT64G1942 Cannabis sativa HOM05D000017 ORTHO05D000013 9.9e-06 54.7 95 27.4
Nitab4.5_0000009g0470 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.9e-06 54.7 56 50.0
Nitab4.5_0006001g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.9e-06 54.7 93 32.3


User provided reference genes

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