Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g024740 Solanum pennellii HOM05D015322 ORTHO05D017755 2.4e-72 275.8 184 100.0
Solyc03g093870.1 Solanum lycopersicum HOM05D015322 ORTHO05D017755 6.2e-60 234.6 185 85.4
PGSC0003DMG400008327 Solanum tuberosum HOM05D015322 ORTHO05D017755 1.5e-42 176.8 199 69.3
PGSC0003DMG400039582 Solanum tuberosum HOM05D015322 ORTHO05D017755 1.5e-26 123.6 177 62.7
CAN.G532.39 Capsicum annuum HOM05D015322 ORTHO05D017755 1.5e-21 107.1 85 68.2
Nitab4.5_0009225g0020 Nicotiana tabacum HOM05D015322 ORTHO05D017755 4.1e-19 99.0 184 56.0
Peaxi162Scf00411g00021 Petunia axillaris HOM05D015322 ORTHO05D017755 1.5e-13 80.5 174 47.7
Nitab4.5_0000766g0080 Nicotiana tabacum HOM05D000174 ORTHO05D000795 2.4e-11 73.2 182 43.4
Solyc06g075775.1 Solanum lycopersicum HOM05D000174 ORTHO05D000795 1.6e-10 70.5 85 48.2
PGSC0003DMG400030311 Solanum tuberosum HOM05D000174 ORTHO05D000795 7.7e-10 68.2 62 58.1
Peaxi162Scf00679g00002 Petunia axillaris HOM05D000174 ORTHO05D000795 1.7e-09 67.0 58 58.6
Peaxi162Scf00224g00021 Petunia axillaris HOM05D000174 ORTHO05D000795 1.1e-08 64.3 58 56.9
HanXRQChr10g0304461 Helianthus annuus HOM05D000174 ORTHO05D000795 1.5e-08 63.9 64 46.9
Lsat_1_v5_gn_5_168460 Lactuca sativa HOM05D000174 ORTHO05D000795 7.2e-08 61.6 62 51.6
Actinidia37236 Actinidia chinensis HOM05D000296 ORTHO05D000175 1.2e-07 60.8 86 43.0
HanXRQChr01g0009791 Helianthus annuus HOM05D000174 ORTHO05D000795 1.2e-07 60.8 61 49.2
HanXRQChr01g0009821 Helianthus annuus HOM05D000174 ORTHO05D000795 1.6e-07 60.5 69 47.8
Lj1C158G11 Lonicera japonica HOM05D000174 ORTHO05D000795 3.6e-07 59.3 65 47.7
HanXRQChr06g0175911 Helianthus annuus HOM05D000174 ORTHO05D000795 4.7e-07 58.9 60 50.0
Lj1C441T0 Lonicera japonica HOM05D000174 ORTHO05D000795 4.7e-07 58.9 65 49.2
Sopen11g030710 Solanum pennellii HOM05D000174 ORTHO05D000795 4.7e-07 58.9 62 54.8
PGSC0003DMG401030312 Solanum tuberosum HOM05D000174 ORTHO05D000795 4.7e-07 58.9 85 40.0
HanXRQChr05g0134221 Helianthus annuus HOM05D000174 ORTHO05D000795 6.1e-07 58.5 70 45.7
Dinv32851 Davidia involucrata HOM05D000174 ORTHO05D000795 8.0e-07 58.2 82 43.9
PGSC0003DMG400015558 Solanum tuberosum HOM05D000174 ORTHO05D000795 8.0e-07 58.2 63 50.8
Solyc11g073060.3 Solanum lycopersicum HOM05D000174 ORTHO05D000795 1.0e-06 57.8 62 54.8
DCAR_015606 Daucus carota HOM05D000174 ORTHO05D000795 1.4e-06 57.4 64 48.4
Lsat_1_v5_gn_5_168420 Lactuca sativa HOM05D000174 ORTHO05D000795 1.4e-06 57.4 80 43.8
Nn2g12894 Nelumbo nucifera HOM05D000174 ORTHO05D000795 1.4e-06 57.4 75 41.3
Sopen06g032200 Solanum pennellii HOM05D000174 ORTHO05D000795 1.4e-06 57.4 67 47.8
Lj1C441T1 Lonicera japonica HOM05D000174 ORTHO05D000795 1.8e-06 57.0 75 41.3
Nn2g10467 Nelumbo nucifera HOM05D000174 ORTHO05D000795 1.8e-06 57.0 64 43.8
Peaxi162Scf00411g00026 Petunia axillaris HOM05D000174 ORTHO05D000795 1.8e-06 57.0 79 45.6
CAN.G394.25 Capsicum annuum HOM05D000174 ORTHO05D000795 2.3e-06 56.6 81 43.2
Phvul.008G014600 Phaseolus vulgaris HOM05D000174 ORTHO05D000795 2.3e-06 56.6 77 41.6
PGR142G2307 Punica granatum HOM05D000174 ORTHO05D000795 2.3e-06 56.6 79 43.0
Rhsim13G0086500 Rhododendron simsii HOM05D000174 ORTHO05D000795 2.3e-06 56.6 77 44.2
Nitab4.5_0012883g0010 Nicotiana tabacum HOM05D000174 ORTHO05D000795 3.0e-06 56.2 62 50.0
Hma1.2p1_0624F.1_g191230 Hydrangea macrophylla HOM05D000174 ORTHO05D000795 4.0e-06 55.8 61 47.5
Hma1.2p1_2442F.1_g322290 Hydrangea macrophylla HOM05D000174 ORTHO05D000795 4.0e-06 55.8 61 47.5
Nitab4.5_0009215g0010 Nicotiana tabacum HOM05D000174 ORTHO05D000795 4.0e-06 55.8 68 48.5
TAR633G0517 Trochodendron aralioides HOM05D000174 ORTHO05D000795 4.0e-06 55.8 63 46.0
Hma1.2p1_0624F.1_g191240 Hydrangea macrophylla HOM05D000174 ORTHO05D000795 5.2e-06 55.5 61 45.9
Nitab4.5_0009215g0020 Nicotiana tabacum HOM05D015322 ORTHO05D017755 5.2e-06 55.5 67 50.7
CAN.G394.24 Capsicum annuum HOM05D000174 ORTHO05D000795 6.7e-06 55.1 50 56.0
Dinv06147 Davidia involucrata HOM05D000174 ORTHO05D000795 6.7e-06 55.1 58 48.3
Lj1C158T10 Lonicera japonica HOM05D000174 ORTHO05D000795 6.7e-06 55.1 61 45.9
Lsat_1_v5_gn_8_77560 Lactuca sativa HOM05D000174 ORTHO05D000795 8.8e-06 54.7 64 46.9
Rhsim13G0086600 Rhododendron simsii HOM05D000174 ORTHO05D000795 8.8e-06 54.7 76 42.1


User provided reference genes

Program Settings