Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 7.0e-270 933.3 458 100.0
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 1.1e-267 926.0 458 99.1
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 1.1e-238 829.7 460 85.0
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 2.0e-237 825.5 460 84.1
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 3.9e-236 821.2 460 84.1
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 1.5e-235 819.3 460 82.4
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 1.9e-235 818.9 460 83.5
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 4.3e-235 817.8 460 82.8
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 8.1e-234 813.5 460 82.4
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 5.2e-233 810.8 461 82.2
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.2e-232 809.7 460 83.0
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.2e-232 809.7 460 83.0
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 5.8e-232 807.4 460 82.2
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 9.8e-232 806.6 475 78.7
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 1.7e-231 805.8 460 80.9
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 4.9e-231 804.3 460 84.1
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 4.9e-231 804.3 460 81.1
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 6.4e-231 803.9 461 82.0
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 1.9e-230 802.4 460 81.3
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 7.1e-230 800.4 460 81.5
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 9.2e-230 800.0 460 80.7
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 9.2e-230 800.0 460 80.2
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 1.2e-229 799.7 461 80.7
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 2.7e-229 798.5 460 81.3
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 3.5e-229 798.1 460 81.1
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 6.0e-229 797.3 460 81.3
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.8e-229 797.0 460 80.9
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 1.0e-228 796.6 461 80.5
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.3e-228 796.2 461 80.5
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 1.7e-228 795.8 460 80.7
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 2.3e-228 795.4 460 80.2
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 3.0e-228 795.0 460 80.7
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 6.6e-228 793.9 460 79.8
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 1.1e-227 793.1 460 80.7
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 1.5e-227 792.7 461 80.7
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 1.9e-227 792.3 460 80.4
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.9e-227 792.3 461 80.3
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 2.5e-227 792.0 460 80.7
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 4.3e-227 791.2 460 80.4
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 9.5e-227 790.0 460 80.0
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 6.2e-226 787.3 460 81.1
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 8.1e-226 786.9 460 82.6
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 1.4e-225 786.2 460 79.1
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 1.8e-225 785.8 462 79.7
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 3.1e-225 785.0 460 79.8
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 4.0e-225 784.6 460 79.1
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 2.6e-224 781.9 460 79.3
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 5.8e-224 780.8 459 79.5
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 9.9e-224 780.0 460 78.9
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 2.9e-223 778.5 481 76.7
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 6.4e-223 777.3 460 82.0
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 2.4e-222 775.4 460 79.3
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 5.4e-222 774.2 460 78.3
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 2.7e-221 771.9 461 79.4
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 1.7e-220 769.2 462 78.6
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 3.9e-220 768.1 460 76.7
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 2.5e-219 765.4 458 77.9
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 3.3e-219 765.0 460 78.7
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 5.6e-219 764.2 460 77.2
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 2.1e-218 762.3 460 77.2
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 6.2e-218 760.8 462 76.2
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 6.2e-218 760.8 460 78.3
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 1.1e-217 760.0 460 79.3
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 3.1e-217 758.4 460 78.0
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 3.1e-217 758.4 460 78.3
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 5.2e-217 757.7 460 77.8
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 1.2e-216 756.5 460 76.7
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 1.2e-216 756.5 460 76.7
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 5.8e-216 754.2 460 80.4
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 3.8e-215 751.5 498 72.5
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 4.9e-215 751.1 455 75.6
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 7.1e-214 747.3 461 74.4
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 3.5e-213 745.0 487 73.9
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 3.5e-213 745.0 443 76.3
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 1.9e-211 739.2 460 75.9
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 3.6e-210 734.9 458 74.2
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 8.4e-207 723.8 460 74.6
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 1.9e-206 722.6 458 72.5
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 9.3e-206 720.3 463 74.1
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 3.5e-205 718.4 460 72.2
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 8.7e-204 713.8 461 75.5
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 1.9e-203 712.6 460 74.1
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 4.6e-189 664.8 452 68.1
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.1e-187 660.2 461 68.5
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.1e-182 643.7 337 94.7
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.3e-180 636.7 456 65.4
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 1.8e-180 636.3 499 61.9
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 5.9e-176 621.3 458 66.2
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 5.9e-176 621.3 394 74.4
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.4e-174 616.7 449 61.5
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.2e-173 613.6 449 61.2
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 7.9e-173 610.9 453 63.1
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 2.4e-169 599.4 307 97.7
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.1e-165 586.3 338 82.5
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 3.9e-164 582.0 341 80.6
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.5e-163 580.1 342 81.0
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.5e-163 580.1 342 81.0
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 4.4e-163 578.6 447 59.5
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 2.8e-162 575.9 337 82.5
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 4.8e-162 575.1 337 81.0
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 4.8e-162 575.1 337 86.9
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.8e-161 573.2 339 79.9
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.8e-161 573.2 300 95.3
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 4.1e-161 572.0 321 83.8
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.0e-161 571.2 339 79.9
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.2e-158 562.4 337 79.8
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.1e-149 533.1 311 80.7
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 4.2e-142 508.8 292 81.5
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.7e-138 496.9 291 80.4
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 1.7e-130 470.3 277 77.6
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 1.4e-129 467.2 338 66.6
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 1.5e-115 420.6 280 70.7
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 1.2e-99 367.9 455 40.0
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 6.9e-92 342.0 160 100.0
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 7.6e-91 338.6 484 36.0
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 3.2e-49 200.3 163 58.9
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.2e-42 177.6 94 87.2
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.2e-42 177.6 94 87.2
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.0e-42 176.4 94 86.2
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 1.4e-36 158.3 99 77.8
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 3.1e-07 60.8 40 72.5


User provided reference genes

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