Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g024270 Solanum pennellii HOM05D002866 ORTHO05D008929 5.0e-148 527.7 257 100.0
PGSC0003DMG400018851 Solanum tuberosum HOM05D002866 ORTHO05D008929 1.3e-143 513.1 257 97.7
Solyc03g093440.4 Solanum lycopersicum HOM05D002866 ORTHO05D008929 5.3e-142 507.7 254 97.6
CAN.G485.17 Capsicum annuum HOM05D002866 ORTHO05D008929 1.5e-133 479.6 257 90.3
Peaxi162Scf00271g00827 Petunia axillaris HOM05D002866 ORTHO05D008929 3.2e-131 471.9 255 89.4
Nitab4.5_0002346g0020 Nicotiana tabacum HOM05D002866 ORTHO05D008929 5.2e-129 464.5 255 88.6
Nitab4.5_0001267g0010 Nicotiana tabacum HOM05D002866 ORTHO05D008929 1.4e-110 403.3 249 81.9
CSS0005256 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008929 5.9e-109 397.9 258 75.2
CSS0048324 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008929 5.9e-109 397.9 258 75.2
Actinidia13601 Actinidia chinensis HOM05D002866 ORTHO05D008929 1.3e-108 396.7 258 74.8
Lj1A976T81 Lonicera japonica HOM05D002866 ORTHO05D008929 1.7e-108 396.4 256 76.2
PGR042G0411 Punica granatum HOM05D002866 ORTHO05D008929 1.7e-108 396.4 255 76.1
Actinidia24979 Actinidia chinensis HOM05D002866 ORTHO05D008929 2.2e-108 396.0 258 74.4
vmacro22348 Vaccinium macrocarpon HOM05D002866 ORTHO05D008929 3.8e-108 395.2 258 74.8
COL.COLO4_14062 Corchorus olitorius HOM05D002866 ORTHO05D008929 1.1e-107 393.7 260 74.6
QL05p020902 Quercus lobata HOM05D002866 ORTHO05D008929 1.5e-107 393.3 259 74.1
Rhsim03G0162900 Rhododendron simsii HOM05D002866 ORTHO05D008929 1.9e-107 392.9 258 74.8
MD07G1250300 Malus domestica HOM05D002866 ORTHO05D008929 2.5e-107 392.5 256 73.8
Oeu021694.1 Olea europaea HOM05D002866 ORTHO05D008929 2.5e-107 392.5 259 73.4
Atru.chr1.858_Atru.chr1.859 Acer truncatum HOM05D002866 ORTHO05D008929 5.5e-107 391.3 258 74.0
QL05p021044 Quercus lobata HOM05D002866 ORTHO05D008929 9.5e-107 390.6 259 74.1
CsaV3_4G004140 Cucumis sativus L. HOM05D002866 ORTHO05D008929 2.7e-106 389.0 263 72.2
ECA238G1321 Erigeron canadensis HOM05D002866 ORTHO05D008929 2.7e-106 389.0 258 72.9
HanXRQChr14g0461261 Helianthus annuus HOM05D002866 ORTHO05D008929 3.6e-106 388.7 257 73.5
Thecc.03G150200 Theobroma cacao HOM05D002866 ORTHO05D008929 8.0e-106 387.5 256 73.8
Cfa013559 Carpinus fangiana HOM05D002866 ORTHO05D008929 1.0e-105 387.1 262 71.8
CiPaw.07G051200 Carya illinoinensis HOM05D002866 ORTHO05D008929 1.0e-105 387.1 258 72.5
Ciclev10005302m.g Citrus clementina HOM05D002866 ORTHO05D008929 1.0e-105 387.1 258 72.5
FvH4_7g27050 Fragaria vesca HOM05D002866 ORTHO05D008929 1.0e-105 387.1 258 72.9
Hund11850 Selenicereus undatus HOM05D002866 ORTHO05D008929 1.0e-105 387.1 256 71.9
GSVIVG01013991001 Vitis vinifera HOM05D002866 ORTHO05D008929 1.0e-105 387.1 258 72.5
Manes.06G132400 Manihot esculenta HOM05D002866 ORTHO05D008929 1.4e-105 386.7 257 72.8
SalBow2G0523 Salvia bowleyana HOM05D002866 ORTHO05D008929 1.8e-105 386.3 259 73.0
Cc02_g04590 Coffea canephora HOM05D002866 ORTHO05D008929 2.3e-105 386.0 258 73.6
Duzib084G0424 Durio zibethinus HOM05D002866 ORTHO05D008929 2.3e-105 386.0 256 73.8
Lsat_1_v5_gn_2_127761 Lactuca sativa HOM05D002866 ORTHO05D008929 2.3e-105 386.0 258 72.1
Prupe.2G273700 Prunus persica HOM05D002866 ORTHO05D008929 3.0e-105 385.6 262 71.4
Aqoxy3G02801 Aquilegia oxysepala HOM05D002866 ORTHO05D008929 4.0e-105 385.2 256 73.4
CANSAT56G0775 Cannabis sativa HOM05D002866 ORTHO05D008929 4.0e-105 385.2 255 72.5
FAN10G2637 Fragaria x ananassa HOM05D002866 ORTHO05D008929 4.0e-105 385.2 258 72.5
PSO063G6150 Papaver somniferum HOM05D002866 ORTHO05D008929 5.2e-105 384.8 259 71.4
AUR62002233 Chenopodium quinoa HOM05D002866 ORTHO05D008929 6.8e-105 384.4 259 71.0
RcHm_v2.0_Chr1g0373871 Rosa chinensis HOM05D002866 ORTHO05D008929 8.8e-105 384.0 258 72.1
Gohir.D12G199700 Gossypium hirsutum HOM05D002866 ORTHO05D008929 1.2e-104 383.6 258 73.6
Gorai.008G214900 Gossypium raimondii HOM05D002866 ORTHO05D008929 1.2e-104 383.6 258 73.6
Ca_14047_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008929 3.4e-104 382.1 259 73.0
Gohir.A12G197100 Gossypium hirsutum HOM05D002866 ORTHO05D008929 3.4e-104 382.1 258 73.3
Migut.F01192 Erythranthe guttata HOM05D002866 ORTHO05D008929 4.4e-104 381.7 256 71.9
Haze_22179 Corylus avellana HOM05D002866 ORTHO05D000055 5.7e-104 381.3 262 71.8
FAN03G0702 Fragaria x ananassa HOM05D002866 ORTHO05D008929 7.5e-104 380.9 258 72.5
Nn6g33860 Nelumbo nucifera HOM05D002866 ORTHO05D008929 9.8e-104 380.6 258 71.7
TPR.G12157 Trifolium pratense HOM05D002866 ORTHO05D008929 9.8e-104 380.6 258 71.7
AUR62015445 Chenopodium quinoa HOM05D002866 ORTHO05D008929 2.2e-103 379.4 259 70.3
Eucgr.A02913 Eucalyptus grandis HOM05D002866 ORTHO05D008929 2.8e-103 379.0 255 71.8
Cpa.g.sc13.272 Carica papaya HOM05D002866 ORTHO05D008929 3.7e-103 378.6 261 71.6
MBI04_g34103_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008929 3.7e-103 378.6 267 71.9
Glyma.06G317300 Glycine max HOM05D002866 ORTHO05D008929 4.9e-103 378.3 258 72.1
Phvul.005G009200 Phaseolus vulgaris HOM05D002866 ORTHO05D008929 6.3e-103 377.9 266 71.8
Lj3g0001933 Lotus japonicus HOM05D002866 ORTHO05D008929 8.3e-103 377.5 256 72.7
EL10Ac3g05868 Beta vulgaris HOM05D002866 ORTHO05D008929 1.1e-102 377.1 260 69.2
Psat5g228760 Pisum sativum HOM05D002866 ORTHO05D008929 1.1e-102 377.1 258 72.5
Potri.014G191900 Populus trichocarpa HOM05D002866 ORTHO05D008929 1.1e-102 377.1 263 71.1
Sed0016729 Sechium edule HOM05D002866 ORTHO05D008929 1.1e-102 377.1 258 69.8
Hund11848 Selenicereus undatus HOM05D002866 ORTHO05D008929 4.1e-102 375.2 250 72.0
CARHR275310 Cardamine hirsuta HOM05D002866 ORTHO05D008929 1.6e-101 373.2 258 69.0
Medtr3g008180 Medicago truncatula HOM05D002866 ORTHO05D008929 1.6e-101 373.2 258 70.9
THA.LOC104818311 Tarenaya hassleriana HOM05D002866 ORTHO05D008929 1.6e-101 373.2 261 70.5
VMungo1080G1351 Vigna mungo HOM05D002866 ORTHO05D008929 2.0e-101 372.9 259 71.4
AT5G61540 Arabidopsis thaliana HOM05D002866 ORTHO05D008929 2.7e-101 372.5 258 69.0
TAR629G2248 Trochodendron aralioides HOM05D002866 ORTHO05D008929 1.0e-100 370.5 259 70.7
Lalb_Chr15g0079681 Lupinus albus HOM05D002866 ORTHO05D008929 1.3e-100 370.2 256 71.1
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 5.0e-100 368.2 259 68.7
Ah.07g207570 Amaranthus hybridus HOM05D002866 ORTHO05D008929 6.6e-100 367.9 259 69.9
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 6.6e-100 367.9 259 68.7
FAN06G4646 Fragaria x ananassa HOM05D002866 ORTHO05D008929 8.6e-100 367.5 288 64.9
Sc13g0007920 Simmondsia chinensis HOM05D002866 ORTHO05D008929 8.6e-100 367.5 258 70.2
HPP92_027439 Vanilla planifolia HOM05D002866 ORTHO05D008929 1.1e-99 367.1 271 67.5
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 1.5e-99 366.7 259 68.7
BraA03t13840Z Brassica rapa HOM05D002866 ORTHO05D008929 1.5e-99 366.7 259 68.7
Sabra14G0144000 Salix brachista HOM05D002866 ORTHO05D008929 1.9e-99 366.3 263 69.6
AL8G38240 Arabidopsis lyrata HOM05D002866 ORTHO05D008929 3.3e-99 365.5 258 68.2
Carub.0008s2223 Capsella rubella HOM05D002866 ORTHO05D008929 7.3e-99 364.4 259 68.0
HPP92_021029 Vanilla planifolia HOM05D002866 ORTHO05D008929 1.2e-98 363.6 271 66.4
Thhalv10004474m.g Eutrema salsugineum HOM05D002866 ORTHO05D008929 8.0e-98 360.9 260 67.7
Sp2g24740 Schrenkiella parvula HOM05D002866 ORTHO05D008929 8.0e-98 360.9 264 67.8
TWI14G1303 Tripterygium wilfordii HOM05D002866 ORTHO05D008929 1.5e-96 356.7 258 69.4
Zm00001eb074820 Zea mays HOM05D002866 ORTHO05D008929 1.5e-96 356.7 256 70.7
Os04g0549300 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008929 2.6e-96 355.9 273 65.9
unitig_60.g25662 Utricularia gibba HOM05D002866 ORTHO05D008929 1.1e-94 350.5 288 60.8
Mapoly0043s0091 Marchantia polymorpha HOM05D002866 ORTHO05D008929 1.2e-90 337.0 260 63.5
SGA_v2.0_scaffold56G19920 Striga asiatica HOM05D002866 ORTHO05D008929 4.4e-88 328.6 268 63.4
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 7.8e-85 317.8 259 61.8
AagrBONN_evm.TU.Sc2ySwM_228.4013 Anthoceros agrestis HOM05D002866 ORTHO05D008929 5.0e-84 315.1 258 60.9
SMO115G0123 Selaginella moellendorffii HOM05D002866 ORTHO05D008929 7.3e-83 311.2 259 62.2
CBR_g51802 Chara braunii HOM05D002866 ORTHO05D000301 1.6e-82 310.1 290 55.9
arahy.Tifrunner.gnm1.ann1.DW86GH Arachis hypogaea HOM05D002866 ORTHO05D008929 6.2e-82 308.1 230 66.5
Aqoxy6G00570 Aquilegia oxysepala HOM05D002866 ORTHO05D008929 1.5e-75 287.0 199 71.4
Aa31LG11G1880 Aethionema arabicum HOM05D002866 ORTHO05D008929 4.0e-73 278.9 260 56.2
Pp3c27_3290 Physcomitrium patens HOM05D002866 ORTHO05D008929 3.0e-68 262.7 280 50.0
CDE11G0041 Ceratophyllum demersum HOM05D002866 ORTHO05D008929 5.8e-64 248.4 182 66.5
ATR0767G136 Amborella trichopoda HOM05D002866 ORTHO05D008929 2.7e-61 239.6 195 63.1
ATR0057G117 Amborella trichopoda HOM05D002866 ORTHO05D008929 1.5e-59 233.8 195 61.5
ClCG07G016910 Citrullus lanatus HOM05D002866 ORTHO05D008929 4.3e-51 205.7 156 66.0
PRCOL_00000617 Prasinoderma coloniale HOM05D002866 ORTHO05D008929 2.2e-47 193.4 243 45.7
Haze_26420 Corylus avellana HOM05D002866 ORTHO05D008929 3.8e-47 192.6 235 47.7
SEGI_24637 Sequoiadendron giganteum HOM05D002866 ORTHO05D008929 4.3e-43 179.1 163 58.3
SEGI_35611 Sequoiadendron giganteum HOM05D002866 ORTHO05D008929 4.3e-43 179.1 163 58.3
MELO3C017653.2 Cucumis melo HOM05D002866 ORTHO05D008929 4.3e-35 152.5 135 57.8
GSVIVG01013998001 Vitis vinifera HOM05D002866 ORTHO05D008929 1.5e-32 144.1 79 79.7
Glyma.14G148200 Glycine max HOM05D002866 ORTHO05D008929 4.2e-30 136.0 87 71.3
Dinv06583 Davidia involucrata HOM05D002866 ORTHO05D008929 2.7e-29 133.3 72 81.9
GSVIVG01013994001 Vitis vinifera HOM05D002866 ORTHO05D008929 1.9e-27 127.1 68 80.9
AL365U10020 Arabidopsis lyrata HOM05D002866 ORTHO05D008929 1.4e-22 110.9 66 72.7
FAN01G2533 Fragaria x ananassa HOM05D002866 ORTHO05D008929 3.3e-19 99.8 53 81.1
CDE04G1873 Ceratophyllum demersum HOM05D002101 ORTHO05D002126 2.4e-09 67.0 232 28.9
Os03g0597600 Oryza sativa ssp. japonica HOM05D002101 ORTHO05D002126 1.6e-08 64.3 233 27.9
CANSAT80G1227 Cannabis sativa HOM05D002101 ORTHO05D002126 2.0e-08 63.9 225 27.1
Glyma.05G018300 Glycine max HOM05D002101 ORTHO05D002126 2.6e-08 63.5 181 28.2
Gohir.D12G187000 Gossypium hirsutum HOM05D002101 ORTHO05D002126 3.5e-08 63.2 234 26.9
Gorai.008G200400 Gossypium raimondii HOM05D002101 ORTHO05D002126 3.5e-08 63.2 234 26.9
Hund09953 Selenicereus undatus HOM05D002101 ORTHO05D002126 3.5e-08 63.2 226 27.4
Duzib205G0808 Durio zibethinus HOM05D002101 ORTHO05D002126 4.5e-08 62.8 229 27.5
Rhsim08G0141600 Rhododendron simsii HOM05D002101 ORTHO05D002126 5.9e-08 62.4 178 30.9
Phvul.003G182400 Phaseolus vulgaris HOM05D002101 ORTHO05D002126 7.7e-08 62.0 181 28.2
Atru.chr9.481 Acer truncatum HOM05D002101 ORTHO05D002126 1.0e-07 61.6 230 27.4
COL.COLO4_27489 Corchorus olitorius HOM05D002101 ORTHO05D002126 1.0e-07 61.6 225 26.2
VMungo1309G3060 Vigna mungo HOM05D002101 ORTHO05D002126 1.0e-07 61.6 176 30.1
CSS0018562 Camellia sinensis var. sinensis HOM05D002101 ORTHO05D002126 1.3e-07 61.2 227 28.6
vmacro23113 Vaccinium macrocarpon HOM05D002101 ORTHO05D002126 1.3e-07 61.2 178 29.2
AagrBONN_evm.TU.Sc2ySwM_117.3587 Anthoceros agrestis HOM05D002101 ORTHO05D002126 1.7e-07 60.8 224 25.4
CSS0012895 Camellia sinensis var. sinensis HOM05D002101 ORTHO05D002126 1.7e-07 60.8 227 28.6
CANSAT80G0948 Cannabis sativa HOM05D002101 ORTHO05D002126 2.2e-07 60.5 225 26.7
RcHm_v2.0_Chr7g0183691 Rosa chinensis HOM05D002101 ORTHO05D002126 2.2e-07 60.5 226 28.3
AUR62032135 Chenopodium quinoa HOM05D002101 ORTHO05D002126 2.9e-07 60.1 179 27.9
ClCG03G016910 Citrullus lanatus HOM05D002101 ORTHO05D002126 2.9e-07 60.1 226 27.4
Ciclev10021205m.g Citrus clementina HOM05D002101 ORTHO05D002126 2.9e-07 60.1 226 27.9
PGR083G1612 Punica granatum HOM05D002101 ORTHO05D002126 2.9e-07 60.1 182 28.0
unitig_578.g15935 Utricularia gibba HOM05D002101 ORTHO05D002126 3.8e-07 59.7 233 26.6
COL.COLO4_27486 Corchorus olitorius HOM05D002101 ORTHO05D002126 5.0e-07 59.3 225 27.1
Sed0014399 Sechium edule HOM05D002101 ORTHO05D002126 5.0e-07 59.3 179 29.1
TWI81G0833 Tripterygium wilfordii HOM05D002101 ORTHO05D002126 5.0e-07 59.3 178 29.8
AUR62039670 Chenopodium quinoa HOM05D002101 ORTHO05D002126 6.5e-07 58.9 179 27.4
MELO3C015327.2 Cucumis melo HOM05D002101 ORTHO05D002126 6.5e-07 58.9 223 26.5
CsaV3_1G039010 Cucumis sativus L. HOM05D002101 ORTHO05D002126 8.5e-07 58.5 225 25.8
arahy.Tifrunner.gnm1.ann1.I7FZVG Arachis hypogaea HOM05D002101 ORTHO05D002126 1.1e-06 58.2 178 28.1
FAN08G2796 Fragaria x ananassa HOM05D002101 ORTHO05D002126 1.1e-06 58.2 176 29.5
arahy.Tifrunner.gnm1.ann1.H2CSA7 Arachis hypogaea HOM05D002101 ORTHO05D002126 1.5e-06 57.8 178 28.1
Haze_18508 Corylus avellana HOM05D002101 ORTHO05D002126 1.5e-06 57.8 177 29.4
EL10Ac5g11187 Beta vulgaris HOM05D002101 ORTHO05D002126 1.9e-06 57.4 179 29.6
CiPaw.15G113400 Carya illinoinensis HOM05D002101 ORTHO05D002126 2.5e-06 57.0 178 28.1
FvH4_5g13420 Fragaria vesca HOM05D002101 ORTHO05D002126 2.5e-06 57.0 178 28.7
FAN18G2660 Fragaria x ananassa HOM05D002101 ORTHO05D002126 2.5e-06 57.0 178 28.7
Psat7g193440 Pisum sativum HOM05D002101 ORTHO05D002126 3.2e-06 56.6 181 27.1
Ah.11g047450 Amaranthus hybridus HOM05D002101 ORTHO05D002126 4.2e-06 56.2 179 28.5
Nn4g23531 Nelumbo nucifera HOM05D002101 ORTHO05D002126 4.2e-06 56.2 178 28.7
Sc12g0006890 Simmondsia chinensis HOM05D002101 ORTHO05D002126 7.2e-06 55.5 225 26.2


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