Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 3.8e-45 184.5 96 100.0
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 1.1e-44 183.0 96 99.0
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 7.5e-41 170.2 96 94.8
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 1.7e-40 169.1 96 90.6
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 2.7e-38 161.8 96 86.5
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 1.3e-37 159.5 96 86.5
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 2.1e-35 152.1 91 84.6
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 2.1e-35 152.1 94 85.1
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 6.1e-35 150.6 83 94.0
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 1.4e-34 149.4 94 84.0
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 1.4e-34 149.4 87 86.2
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 1.8e-34 149.1 94 80.9
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 2.3e-34 148.7 91 85.7
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 4.0e-34 147.9 86 90.7
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 1.2e-33 146.4 94 83.0
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 1.2e-33 146.4 85 91.8
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 1.5e-33 146.0 94 81.9
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 2.6e-33 145.2 90 83.3
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 2.6e-33 145.2 94 81.9
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 2.6e-33 145.2 86 88.4
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 3.4e-33 144.8 94 81.9
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 5.8e-33 144.1 85 89.4
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 5.8e-33 144.1 83 91.6
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 5.8e-33 144.1 83 91.6
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 5.8e-33 144.1 83 91.6
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 7.5e-33 143.7 91 83.5
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 7.5e-33 143.7 92 82.6
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 7.5e-33 143.7 84 89.3
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 9.8e-33 143.3 83 90.4
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 9.8e-33 143.3 90 82.2
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 9.8e-33 143.3 94 80.9
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 1.7e-32 142.5 93 83.9
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 1.7e-32 142.5 88 85.2
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 1.7e-32 142.5 94 77.7
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 2.2e-32 142.1 94 78.7
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 3.7e-32 141.4 84 88.1
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 4.9e-32 141.0 84 88.1
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 4.9e-32 141.0 94 81.9
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 4.9e-32 141.0 94 81.9
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 4.9e-32 141.0 84 85.7
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 8.3e-32 140.2 86 79.1
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 8.3e-32 140.2 88 83.0
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 1.1e-31 139.8 84 84.5
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.4e-31 139.4 90 83.3
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.9e-31 139.0 93 78.5
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 1.9e-31 139.0 84 86.9
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 1.9e-31 139.0 83 86.7
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 1.9e-31 139.0 89 79.8
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 2.4e-31 138.7 87 85.1
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 3.2e-31 138.3 85 77.6
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 4.1e-31 137.9 90 74.4
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 4.1e-31 137.9 82 80.5
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 4.1e-31 137.9 78 88.5
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 5.4e-31 137.5 94 72.3
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 5.4e-31 137.5 91 79.1
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 5.4e-31 137.5 94 79.8
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 5.4e-31 137.5 94 79.8
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 5.4e-31 137.5 76 88.2
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 9.2e-31 136.7 82 86.6
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 9.2e-31 136.7 84 83.3
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 9.2e-31 136.7 89 80.9
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 2.7e-30 135.2 109 70.6
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 2.7e-30 135.2 94 74.5
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 3.5e-30 134.8 91 76.9
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 3.5e-30 134.8 93 77.4
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 4.6e-30 134.4 91 75.8
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 4.6e-30 134.4 91 75.8
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 4.6e-30 134.4 94 75.5
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 6.0e-30 134.0 94 72.3
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 6.0e-30 134.0 94 72.3
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 6.0e-30 134.0 90 82.2
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 6.0e-30 134.0 94 75.5
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 1.3e-29 132.9 94 71.3
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 1.3e-29 132.9 94 73.4
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 1.7e-29 132.5 82 78.0
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-29 132.5 91 70.3
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 1.7e-29 132.5 91 70.3
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 1.7e-29 132.5 91 70.3
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 3.0e-29 131.7 95 71.6
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 3.0e-29 131.7 75 89.3
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 3.9e-29 131.3 78 83.3
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 3.9e-29 131.3 74 86.5
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 6.6e-29 130.6 91 69.2
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 8.6e-29 130.2 90 74.4
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 1.1e-28 129.8 82 84.1
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 1.5e-28 129.4 84 75.0
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.9e-28 129.0 108 69.4
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.9e-28 129.0 91 73.6
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 2.5e-28 128.6 82 75.6
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 2.5e-28 128.6 76 85.5
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.2e-27 126.3 99 69.7
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 1.6e-27 125.9 97 67.0
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 2.1e-27 125.6 82 74.4
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 2.1e-27 125.6 82 74.4
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 2.8e-27 125.2 82 74.4
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 2.8e-27 125.2 82 74.4
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 2.8e-27 125.2 82 74.4
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 2.8e-27 125.2 82 74.4
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 3.6e-27 124.8 91 68.1
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 3.6e-27 124.8 77 85.7
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 3.6e-27 124.8 113 63.7
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 4.7e-27 124.4 85 75.3
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 4.7e-27 124.4 70 91.4
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 6.2e-27 124.0 92 63.0
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 6.2e-27 124.0 70 84.3
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 1.1e-26 123.2 79 74.7
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 1.1e-26 123.2 119 62.2
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 3.1e-26 121.7 83 72.3
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 3.1e-26 121.7 76 82.9
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 6.8e-26 120.6 97 70.1
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.5e-25 119.4 80 77.5
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 2.6e-25 118.6 79 74.7
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 1.7e-24 115.9 78 78.2
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 1.7e-24 115.9 69 81.2
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 3.7e-24 114.8 68 85.3
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 2.4e-23 112.1 79 70.9
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 1.0e-21 106.7 66 78.8
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 2.5e-20 102.1 73 68.5
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 5.2e-18 94.4 83 57.8
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 2.9e-16 88.6 89 60.7
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 6.4e-16 87.4 71 66.2
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 3.2e-15 85.1 68 66.2
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 7.8e-14 80.5 69 56.5
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 3.9e-13 78.2 60 61.7
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 2.5e-12 75.5 47 78.7
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 2.1e-11 72.4 59 64.4
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 6.2e-11 70.9 57 61.4
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 1.1e-10 70.1 63 57.1
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-07 60.1 48 60.4
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-07 60.1 48 60.4
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-07 60.1 48 60.4


User provided reference genes

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