Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g023950 Solanum pennellii HOM05D003975 ORTHO05D009762 1.7e-247 860.1 1033 100.0
Solyc03g093150.3 Solanum lycopersicum HOM05D003975 ORTHO05D009762 1.5e-211 740.7 981 98.9
PGSC0003DMG402014825 Solanum tuberosum HOM05D003975 ORTHO05D009762 5.0e-199 699.1 981 96.1
CAN.G48.19 Capsicum annuum HOM05D003975 ORTHO05D009762 1.2e-157 561.6 842 77.6
Nitab4.5_0002816g0010 Nicotiana tabacum HOM05D003975 ORTHO05D009762 1.0e-135 488.8 983 83.8
Nitab4.5_0009543g0010 Nicotiana tabacum HOM05D003975 ORTHO05D009762 1.6e-125 454.9 983 82.5
Peaxi162Scf00241g00015 Petunia axillaris HOM05D003975 ORTHO05D009762 1.1e-92 345.9 980 78.5
Dinv28563 Davidia involucrata HOM05D003975 ORTHO05D009762 1.5e-81 308.9 827 71.6
Nitab4.5_0002149g0030 Nicotiana tabacum HOM05D003975 ORTHO05D009762 1.2e-78 299.3 845 49.6
Cc00_g07030 Coffea canephora HOM05D003975 ORTHO05D009762 2.5e-65 255.0 851 64.2
Rhsim09G0192100 Rhododendron simsii HOM05D000201 ORTHO05D000375 2.0e-62 245.4 835 66.2
MSTRG.8816 Avicennia marina HOM05D003975 ORTHO05D009762 7.0e-60 236.9 816 60.4
Lj8C41T2 Lonicera japonica HOM05D003975 ORTHO05D009762 4.3e-57 227.6 830 67.8
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 4.7e-56 224.2 840 65.0
GSVIVG01018516001 Vitis vinifera HOM05D003975 ORTHO05D009762 3.4e-54 218.0 449 66.6
CANSAT11G0896 Cannabis sativa HOM05D003975 ORTHO05D009762 4.4e-54 217.6 823 57.4
CSS0048267 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009762 1.4e-52 212.6 448 70.5
SGA_v2.0_scaffold2G01188 Striga asiatica HOM05D003975 ORTHO05D009762 1.9e-52 212.2 803 58.4
Lsat_1_v5_gn_8_8880 Lactuca sativa HOM05D003975 ORTHO05D009762 5.2e-47 194.1 826 57.5
Atru.chr1.696 Acer truncatum HOM05D003975 ORTHO05D009762 8.9e-47 193.4 798 53.8
Haze_13863 Corylus avellana HOM05D003975 ORTHO05D009762 3.7e-45 188.0 823 56.9
QL09p019427 Quercus lobata HOM05D003975 ORTHO05D009762 2.1e-43 182.2 829 59.6
Nitab4.5_0002556g0070 Nicotiana tabacum HOM05D003975 ORTHO05D009762 6.0e-43 180.6 113 82.3
Migut.F00464 Erythranthe guttata HOM05D003975 ORTHO05D009762 2.1e-40 172.2 824 58.9
DCAR_029158 Daucus carota HOM05D003975 ORTHO05D009762 2.8e-40 171.8 798 61.7
Cfa008191 Carpinus fangiana HOM05D003975 ORTHO05D009762 2.6e-38 165.2 822 57.4
ECA233G1567 Erigeron canadensis HOM05D003975 ORTHO05D009762 2.6e-38 165.2 445 47.6
Thecc.03G157100 Theobroma cacao HOM05D003975 ORTHO05D009762 6.0e-35 154.1 828 53.1
Gohir.A03G058201 Gossypium hirsutum HOM05D003975 ORTHO05D009762 8.6e-34 150.2 429 68.3
TAR375G0346 Trochodendron aralioides HOM05D003975 ORTHO05D009762 1.2e-30 139.8 153 51.6
CSS0004960 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009762 2.0e-30 139.0 133 53.4
HanXRQChr05g0142511 Helianthus annuus HOM05D003975 ORTHO05D009762 5.8e-30 137.5 488 48.0
CiPaw.03G094900 Carya illinoinensis HOM05D003975 ORTHO05D009762 6.4e-29 134.0 841 60.2
Oeu023215.2 Olea europaea HOM05D003975 ORTHO05D009762 2.7e-27 128.6 123 54.5
Gorai.003G114200 Gossypium raimondii HOM05D003975 ORTHO05D009762 6.0e-27 127.5 824 56.9
Sabra09G0126700 Salix brachista HOM05D003975 ORTHO05D009762 2.3e-26 125.6 510 33.3
Eucgr.D00222 Eucalyptus grandis HOM05D003975 ORTHO05D009762 3.0e-26 125.2 799 55.1
Gohir.D03G107900 Gossypium hirsutum HOM05D003975 ORTHO05D009762 5.1e-26 124.4 824 56.7
TWI39G0436 Tripterygium wilfordii HOM05D003975 ORTHO05D009762 5.1e-26 124.4 833 55.2
Duzib205G1466 Durio zibethinus HOM05D003975 ORTHO05D009762 6.6e-26 124.0 163 47.2
Atru.chr1.699 Acer truncatum HOM05D003975 ORTHO05D009762 8.7e-26 123.6 132 49.2
QL05p001270 Quercus lobata HOM05D003975 ORTHO05D009762 1.5e-25 122.9 146 47.9
Manes.15G055100 Manihot esculenta HOM05D003975 ORTHO05D009762 3.3e-25 121.7 150 44.7
Ciclev10004237m.g Citrus clementina HOM05D003975 ORTHO05D009762 4.3e-25 121.3 525 39.0
PGR142G2422 Punica granatum HOM05D003975 ORTHO05D009762 1.6e-24 119.4 154 43.5
Sabra15G0045800 Salix brachista HOM05D003975 ORTHO05D009762 2.8e-24 118.6 515 35.0
Sabra15G0053100 Salix brachista HOM05D003975 ORTHO05D009762 3.6e-24 118.2 517 33.3
Sabra15G0054000 Salix brachista HOM05D003975 ORTHO05D009762 8.1e-24 117.1 517 30.8
Sabra15G0031500 Salix brachista HOM05D003975 ORTHO05D009762 1.4e-23 116.3 141 42.6
Sabra15G0044600 Salix brachista HOM05D003975 ORTHO05D009762 1.4e-23 116.3 141 42.6
Sabra15G0052100 Salix brachista HOM05D003975 ORTHO05D009762 1.4e-23 116.3 515 39.2
MBI04_g11438_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009762 4.0e-23 114.8 137 46.0
Sabra15G0048500 Salix brachista HOM05D003975 ORTHO05D009762 5.3e-23 114.4 139 42.4
Sabra15G0060200 Salix brachista HOM05D003975 ORTHO05D009762 5.3e-23 114.4 139 42.4
Potri.004G200900 Populus trichocarpa HOM05D003975 ORTHO05D009762 6.9e-23 114.0 494 30.2
Sed0001623 Sechium edule HOM05D003975 ORTHO05D009762 9.0e-23 113.6 143 44.8
COL.COLO4_14135 Corchorus olitorius HOM05D003975 ORTHO05D009762 7.6e-22 110.5 120 46.7
Sabra04G0136000 Salix brachista HOM05D003975 ORTHO05D009762 2.9e-21 108.6 144 43.1
Aqoxy6G00092 Aquilegia oxysepala HOM05D003975 ORTHO05D009762 3.8e-21 108.2 151 41.1
Sabra15G0046400 Salix brachista HOM05D003975 ORTHO05D009762 3.8e-21 108.2 138 41.3
CARHR276150 Cardamine hirsuta HOM05D003975 ORTHO05D009762 1.6e-19 102.8 443 53.5
MELO3C006816.2 Cucumis melo HOM05D003975 ORTHO05D009762 3.5e-19 101.7 151 44.4
BcaNung03569 Brassica carinata HOM05D003975 ORTHO05D009762 6.0e-19 100.9 444 58.8
Sp2g25540 Schrenkiella parvula HOM05D003975 ORTHO05D009762 3.9e-18 98.2 152 37.5
AT5G62370 Arabidopsis thaliana HOM05D003975 ORTHO05D009762 2.5e-17 95.5 152 33.6
THA.LOC104821407 Tarenaya hassleriana HOM05D003975 ORTHO05D009762 2.5e-17 95.5 140 43.6
Thhalv10003595m.g Eutrema salsugineum HOM05D003975 ORTHO05D009762 5.6e-17 94.4 143 37.8
C01p23090 Brassica napus HOM05D003975 ORTHO05D009762 9.6e-17 93.6 446 58.3
BolC1t02243H Brassica oleracea HOM05D003975 ORTHO05D009762 9.6e-17 93.6 446 58.1
A01p18130 Brassica napus HOM05D003975 ORTHO05D009762 1.3e-16 93.2 146 37.7
BraA01t01768Z Brassica rapa HOM05D003975 ORTHO05D009762 1.3e-16 93.2 146 37.7
BcaNung03570 Brassica carinata HOM05D003975 ORTHO05D009762 1.6e-16 92.8 148 37.2
Carub.0008s2305 Capsella rubella HOM05D003975 ORTHO05D009762 3.6e-16 91.7 442 51.4
AL8G39200 Arabidopsis lyrata HOM05D003975 ORTHO05D009762 6.2e-16 90.9 152 32.9
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 6.2e-16 90.9 104 41.3
Nn1g01091 Nelumbo nucifera HOM05D003975 ORTHO05D009762 1.2e-14 86.7 139 41.0
Aa31LG11G1250 Aethionema arabicum HOM05D003975 ORTHO05D009762 2.0e-14 85.9 139 33.8
CsaV3_3G016180 Cucumis sativus L. HOM05D003975 ORTHO05D009762 1.7e-13 82.8 116 40.5
ATR0743G010 Amborella trichopoda HOM05D003975 ORTHO05D009762 1.9e-12 79.3 110 41.8
ATR0743G137 Amborella trichopoda HOM05D003975 ORTHO05D009762 1.2e-11 76.6 110 40.9
CAN.G508.18 Capsicum annuum HOM05D000002 ORTHO05D000001 2.7e-11 75.5 47 83.0
Nitab4.5_0005512g0030 Nicotiana tabacum HOM05D000508 ORTHO05D000371 2.7e-11 75.5 173 73.4
HPP92_003270 Vanilla planifolia HOM05D003975 ORTHO05D009762 2.4e-07 62.4 113 37.2


User provided reference genes

Program Settings