Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g022520 Solanum pennellii HOM05D000001 ORTHO05D010330 1.9e-32 144.1 323 100.0
Solyc03g082770.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 6.4e-28 129.0 76 84.2
Sopen01g001890 Solanum pennellii HOM05D000001 ORTHO05D010330 8.7e-25 118.6 76 81.6
Solyc01g005880.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 4.3e-24 116.3 76 80.3
PGSC0003DMG400032222 Solanum tuberosum HOM05D000001 ORTHO05D010330 1.4e-22 111.3 87 78.2
Solyc02g030220.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 1.2e-18 98.2 61 82.0
PGSC0003DMG400032223 Solanum tuberosum HOM05D000001 ORTHO05D010330 1.6e-18 97.8 76 68.4
PGSC0003DMG400031398 Solanum tuberosum HOM05D000001 ORTHO05D010330 4.8e-15 86.3 66 78.8
Nitab4.5_0001059g0200 Nicotiana tabacum HOM05D000001 ORTHO05D010330 1.3e-12 78.2 62 67.7
CAN.G158.20 Capsicum annuum HOM05D000001 ORTHO05D010330 1.7e-12 77.8 57 71.9
CAN.G158.19 Capsicum annuum HOM05D000001 ORTHO05D010330 1.1e-11 75.1 58 67.2
Nitab4.5_0005729g0100 Nicotiana tabacum HOM05D000001 ORTHO05D006702 4.2e-11 73.2 90 51.1
Peaxi162Scf00643g00059 Petunia axillaris HOM05D000001 ORTHO05D010330 5.5e-11 72.8 60 61.7
Nitab4.5_0002279g0110 Nicotiana tabacum HOM05D000001 ORTHO05D010330 1.2e-10 71.6 60 61.7
CAN.G606.45 Capsicum annuum HOM05D000001 ORTHO05D010330 1.6e-10 71.2 80 53.8
CAN.G203.45 Capsicum annuum HOM05D000001 ORTHO05D010330 2.7e-10 70.5 54 63.0
Nitab4.5_0009733g0010 Nicotiana tabacum HOM05D000001 ORTHO05D000003 2.7e-10 70.5 88 50.0
Sopen05g030810 Solanum pennellii HOM05D000001 ORTHO05D010330 3.6e-10 70.1 56 64.3
Nitab4.5_0005441g0070 Nicotiana tabacum HOM05D000001 ORTHO05D010330 1.4e-09 68.2 88 48.9
Solyc01g005850.2 Solanum lycopersicum HOM05D000001 ORTHO05D010330 2.3e-09 67.4 50 74.0
Sopen01g001850 Solanum pennellii HOM05D000001 ORTHO05D010330 2.3e-09 67.4 50 74.0
CAN.G203.46 Capsicum annuum HOM05D000001 ORTHO05D010330 3.0e-09 67.0 54 59.3
Nitab4.5_0007486g0060 Nicotiana tabacum HOM05D000001 ORTHO05D010330 3.9e-09 66.6 81 50.6
PGSC0003DMG400011652 Solanum tuberosum HOM05D000001 ORTHO05D395843 3.9e-09 66.6 44 72.7
Nitab4.5_0001105g0210 Nicotiana tabacum HOM05D000001 ORTHO05D010330 8.8e-09 65.5 80 47.5
Nitab4.5_0008936g0020 Nicotiana tabacum HOM05D000001 ORTHO05D010330 8.8e-09 65.5 82 50.0
Solyc03g082790.4 Solanum lycopersicum HOM05D000001 ORTHO05D010330 1.1e-08 65.1 49 71.4
Sopen03g022540 Solanum pennellii HOM05D000001 ORTHO05D010330 1.1e-08 65.1 49 71.4
Nitab4.5_0003799g0040 Nicotiana tabacum HOM05D000001 ORTHO05D010330 1.5e-08 64.7 43 76.7
Nitab4.5_0007486g0050 Nicotiana tabacum HOM05D000001 ORTHO05D010330 1.5e-08 64.7 81 48.1
Sopen01g001860 Solanum pennellii HOM05D000001 ORTHO05D010330 1.9e-08 64.3 49 71.4
Nitab4.5_0001059g0210 Nicotiana tabacum HOM05D000001 ORTHO05D010330 3.3e-08 63.5 50 66.0
Nitab4.5_0003074g0010 Nicotiana tabacum HOM05D000001 ORTHO05D010330 3.3e-08 63.5 74 51.4
Nitab4.5_0001059g0250 Nicotiana tabacum HOM05D000001 ORTHO05D010330 7.4e-08 62.4 81 51.9
Peaxi162Scf00282g00132 Petunia axillaris HOM05D000001 ORTHO05D000003 7.4e-08 62.4 73 54.8
CAN.G134.130 Capsicum annuum HOM05D000001 ORTHO05D010330 2.2e-07 60.8 80 48.8
PGSC0003DMG400025936 Solanum tuberosum HOM05D000001 ORTHO05D010330 2.2e-07 60.8 64 56.2
CAN.G134.127 Capsicum annuum HOM05D000001 ORTHO05D010330 2.8e-07 60.5 74 50.0
Peaxi162Scf00016g02742 Petunia axillaris HOM05D000001 ORTHO05D306469 2.8e-07 60.5 54 57.4
Peaxi162Scf00282g00035 Petunia axillaris HOM05D000001 ORTHO05D010330 2.8e-07 60.5 64 54.7
Nitab4.5_0001730g0150 Nicotiana tabacum HOM05D000001 ORTHO05D010330 3.7e-07 60.1 61 54.1
PGSC0003DMG400022516 Solanum tuberosum HOM05D000001 ORTHO05D010330 3.7e-07 60.1 50 62.0
PGSC0003DMG400022518 Solanum tuberosum HOM05D000001 ORTHO05D010330 3.7e-07 60.1 50 62.0
Nitab4.5_0000375g0170 Nicotiana tabacum HOM05D000001 ORTHO05D010330 4.8e-07 59.7 60 58.3
Peaxi162Scf01111g00014 Petunia axillaris HOM05D000001 ORTHO05D010330 4.8e-07 59.7 50 64.0
Solyc01g097680.2 Solanum lycopersicum HOM05D000001 ORTHO05D010330 4.8e-07 59.7 50 64.0
Solyc01g097690.2 Solanum lycopersicum HOM05D000001 ORTHO05D010330 4.8e-07 59.7 50 64.0
Solyc01g097720.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 4.8e-07 59.7 50 64.0
Solyc01g014830.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 6.3e-07 59.3 66 54.5
Sopen01g041290 Solanum pennellii HOM05D000001 ORTHO05D010330 8.2e-07 58.9 85 47.1
Nitab4.5_0001059g0220 Nicotiana tabacum HOM05D000001 ORTHO05D010330 1.1e-06 58.5 50 64.0
Sopen01g041310 Solanum pennellii HOM05D000001 ORTHO05D010330 1.4e-06 58.2 50 62.0
Sopen01g049480 Solanum pennellii HOM05D000001 ORTHO05D010330 1.4e-06 58.2 60 53.3
PGSC0003DMG400019439 Solanum tuberosum HOM05D000001 ORTHO05D010330 1.4e-06 58.2 50 62.0
Nitab4.5_0001059g0230 Nicotiana tabacum HOM05D000001 ORTHO05D010330 2.4e-06 57.4 77 48.1
Nitab4.5_0008936g0030 Nicotiana tabacum HOM05D000001 ORTHO05D010330 2.4e-06 57.4 64 54.7
Solyc01g097710.1 Solanum lycopersicum HOM05D000001 ORTHO05D010330 3.1e-06 57.0 50 60.0
Sopen01g041320 Solanum pennellii HOM05D000001 ORTHO05D010330 3.1e-06 57.0 50 60.0
CAN.G134.128 Capsicum annuum HOM05D000001 ORTHO05D010330 4.1e-06 56.6 50 60.0
Sopen01g041300 Solanum pennellii HOM05D000001 ORTHO05D010330 4.1e-06 56.6 62 54.8
Sopen01g041330 Solanum pennellii HOM05D000001 ORTHO05D010330 4.1e-06 56.6 50 60.0
CAN.G134.129 Capsicum annuum HOM05D000001 ORTHO05D010330 9.1e-06 55.5 74 47.3


User provided reference genes

Program Settings