Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g022090 Solanum pennellii HOM05D008837 ORTHO05D006961 2.4e-33 145.2 91 100.0
Solyc03g082370.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 1.8e-31 139.0 90 96.7
PGSC0003DMG400003217 Solanum tuberosum HOM05D008837 ORTHO05D006961 1.7e-26 122.5 96 82.3
Nitab4.5_0005040g0030 Nicotiana tabacum HOM05D008837 ORTHO05D006961 1.7e-18 95.9 99 60.6
Nitab4.5_0000319g0160 Nicotiana tabacum HOM05D008837 ORTHO05D006961 8.5e-18 93.6 97 69.1
Nitab4.5_0000319g0090 Nicotiana tabacum HOM05D008837 ORTHO05D006961 4.6e-16 87.8 99 67.7
PGSC0003DMG400043889 Solanum tuberosum HOM05D008837 ORTHO05D006961 1.8e-15 85.9 102 54.9
Nitab4.5_0000319g0150 Nicotiana tabacum HOM05D008837 ORTHO05D006961 8.8e-15 83.6 99 54.5
PGSC0003DMG400003216 Solanum tuberosum HOM05D008837 ORTHO05D006961 8.2e-13 77.0 98 53.1
Sopen03g022050 Solanum pennellii HOM05D008837 ORTHO05D006961 2.0e-11 72.4 94 51.1
Solyc03g081330.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 2.6e-11 72.0 95 50.5
Peaxi162Scf00300g00088 Petunia axillaris HOM05D008837 ORTHO05D006961 3.4e-11 71.6 99 59.6
Sopen03g022070 Solanum pennellii HOM05D008837 ORTHO05D006961 8.5e-10 67.0 102 51.0
Nitab4.5_0014067g0010 Nicotiana tabacum HOM05D008837 ORTHO05D006961 1.1e-09 66.6 67 67.2
Solyc03g082350.2 Solanum lycopersicum HOM05D008837 ORTHO05D006961 1.9e-09 65.9 102 46.1
Actinidia08695 Actinidia chinensis HOM05D008837 ORTHO05D006961 2.1e-08 62.4 97 43.3
Ciclev10023060m.g Citrus clementina HOM05D008837 ORTHO05D006961 2.7e-08 62.0 94 44.7
Peaxi162Scf00300g00087 Petunia axillaris HOM05D008837 ORTHO05D006961 6.1e-08 60.8 92 56.5
COL.COLO4_14365 Corchorus olitorius HOM05D018669 ORTHO05D011237 1.8e-07 59.3 91 38.5
Oeu061026.1 Olea europaea HOM05D008837 ORTHO05D006961 2.3e-07 58.9 93 43.0
Sabra15G0003300 Salix brachista HOM05D008837 ORTHO05D006961 3.9e-07 58.2 91 41.8
Ciclev10017302m.g Citrus clementina HOM05D008837 ORTHO05D011237 5.1e-07 57.8 94 40.4
Potri.015G004800 Populus trichocarpa HOM05D008837 ORTHO05D011237 8.8e-07 57.0 92 43.5
Rhsim03G0215000 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.1e-06 56.6 104 39.4
Thecc.03G208100 Theobroma cacao HOM05D018669 ORTHO05D011237 1.5e-06 56.2 94 44.7
Manes.05G197800 Manihot esculenta HOM05D008837 ORTHO05D011237 2.0e-06 55.8 93 39.8
Atru.chr12.2412 Acer truncatum HOM05D008837 ORTHO05D011237 2.6e-06 55.5 89 46.1
Nitab4.5_0000319g0100 Nicotiana tabacum HOM05D008837 ORTHO05D006961 2.6e-06 55.5 64 60.9
EL10Ac3g05185 Beta vulgaris HOM05D008837 ORTHO05D006961 4.4e-06 54.7 92 39.1
PGR042G1156 Punica granatum HOM05D008837 ORTHO05D011237 5.7e-06 54.3 94 41.5
DCAR_020369 Daucus carota HOM05D008837 ORTHO05D011237 9.7e-06 53.5 91 39.6
TAR629G3181 Trochodendron aralioides HOM05D008613 ORTHO05D006961 9.7e-06 53.5 88 40.9


User provided reference genes

Program Settings