Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g021950 Solanum pennellii HOM05D005840 ORTHO05D007144 1.6e-166 589.3 292 100.0
Solyc03g081220.1 Solanum lycopersicum HOM05D005840 ORTHO05D007144 2.0e-161 572.4 292 97.9
PGSC0003DMG400000562 Solanum tuberosum HOM05D005840 ORTHO05D007144 7.1e-159 563.9 292 96.6
CAN.G303.23 Capsicum annuum HOM05D005840 ORTHO05D007144 1.9e-140 502.7 293 86.3
Nitab4.5_0000319g0020 Nicotiana tabacum HOM05D005840 ORTHO05D007144 4.9e-136 488.0 293 85.0
Nitab4.5_0010809g0010 Nicotiana tabacum HOM05D005840 ORTHO05D007144 4.9e-136 488.0 293 84.6
Dinv35383 Davidia involucrata HOM05D005840 ORTHO05D007144 7.2e-111 404.4 291 69.8
CSS0020402 Camellia sinensis var. sinensis HOM05D005840 ORTHO05D007144 1.1e-108 397.1 284 69.4
Cc02_g00800 Coffea canephora HOM05D005840 ORTHO05D007144 8.2e-107 391.0 298 69.8
Peaxi162Scf00912g10012 Petunia axillaris HOM05D005840 ORTHO05D007144 4.2e-103 378.6 226 84.5
DCAR_008987 Daucus carota HOM05D005840 ORTHO05D007144 2.3e-101 372.9 293 64.2
Oeu023690.1 Olea europaea HOM05D005840 ORTHO05D007144 2.3e-101 372.9 284 68.7
MSTRG.8611 Avicennia marina HOM05D005840 ORTHO05D007144 8.5e-96 354.4 301 63.1
TAR375G0732 Trochodendron aralioides HOM05D005840 ORTHO05D007144 1.5e-95 353.6 295 65.4
MSTRG.26975 Avicennia marina HOM05D005840 ORTHO05D007144 6.8e-93 344.7 282 65.6
SalBow6G2506 Salvia bowleyana HOM05D005840 ORTHO05D007144 1.7e-91 340.1 301 63.5
Cpa.g.sc3.150 Carica papaya HOM05D005840 ORTHO05D007144 1.8e-90 336.7 294 59.2
Lsat_1_v5_gn_9_49980 Lactuca sativa HOM05D005840 ORTHO05D007144 9.1e-90 334.3 288 60.1
Migut.F00150 Erythranthe guttata HOM05D005840 ORTHO05D007144 1.2e-89 334.0 295 63.4
SGA_v2.0_scaffold18G08468 Striga asiatica HOM05D005840 ORTHO05D007144 4.5e-89 332.0 284 63.0
unitig_37.g11995 Utricularia gibba HOM05D005840 ORTHO05D007144 5.9e-89 331.6 301 58.5
PGR042G3207 Punica granatum HOM05D005840 ORTHO05D007144 1.7e-88 330.1 289 61.2
Hma1.2p1_0094F.1_g047400 Hydrangea macrophylla HOM05D005840 ORTHO05D007144 2.2e-88 329.7 220 73.6
Lalb_Chr08g0239571 Lupinus albus HOM05D005840 ORTHO05D007144 2.9e-88 329.3 306 60.1
Lalb_Chr23g0271941 Lupinus albus HOM05D005840 ORTHO05D007144 6.5e-88 328.2 279 63.1
FvH4_7g32940 Fragaria vesca HOM05D005840 ORTHO05D007144 2.5e-87 326.2 286 61.9
QL09p007163 Quercus lobata HOM05D005840 ORTHO05D007144 2.5e-87 326.2 276 61.6
Oeu055391.1 Olea europaea HOM05D005840 ORTHO05D007144 3.2e-87 325.9 229 71.2
Psat5g071840 Pisum sativum HOM05D005840 ORTHO05D007144 4.2e-87 325.5 294 59.2
TPR.G33360 Trifolium pratense HOM05D005840 ORTHO05D007144 2.7e-86 322.8 293 57.7
Nn3g18788 Nelumbo nucifera HOM05D005840 ORTHO05D007144 6.1e-86 321.6 277 58.5
RcHm_v2.0_Chr1g0382901 Rosa chinensis HOM05D005840 ORTHO05D007144 8.0e-86 321.2 293 59.7
Ca_16781_v3 Cicer arietinum L. HOM05D005840 ORTHO05D007144 1.0e-85 320.9 273 60.8
Manes.01G043400 Manihot esculenta HOM05D005840 ORTHO05D007144 1.8e-85 320.1 297 57.6
Prupe.2G319100 Prunus persica HOM05D005840 ORTHO05D007144 2.3e-85 319.7 291 58.4
Thecc.03G209000 Theobroma cacao HOM05D005840 ORTHO05D007144 3.0e-85 319.3 277 59.2
Duzib084G0063 Durio zibethinus HOM05D005840 ORTHO05D007144 4.0e-85 318.9 271 60.9
TWI14G0550 Tripterygium wilfordii HOM05D005840 ORTHO05D007144 5.2e-85 318.5 269 59.9
FAN10G0422 Fragaria x ananassa HOM05D005840 ORTHO05D007144 6.8e-85 318.2 288 60.4
Medtr3g092810 Medicago truncatula HOM05D005840 ORTHO05D007144 6.8e-85 318.2 291 57.7
HanXRQChr10g0305331 Helianthus annuus HOM05D005840 ORTHO05D007144 8.8e-85 317.8 290 61.4
FAN10G3655 Fragaria x ananassa HOM05D005840 ORTHO05D007144 1.2e-84 317.4 288 60.4
FAN03G2485 Fragaria x ananassa HOM05D005840 ORTHO05D007144 2.6e-84 316.2 287 60.6
Lsat_1_v5_gn_2_135020 Lactuca sativa HOM05D005840 ORTHO05D007144 9.8e-84 314.3 285 60.7
Ciclev10021557m.g Citrus clementina HOM05D005840 ORTHO05D007144 1.7e-83 313.5 284 60.2
Atru.chr12.2435 Acer truncatum HOM05D005840 ORTHO05D007144 6.3e-83 311.6 291 58.8
Potri.015G002500 Populus trichocarpa HOM05D005840 ORTHO05D007144 8.3e-83 311.2 296 55.7
Sabra15G0001600 Salix brachista HOM05D005840 ORTHO05D007144 1.4e-82 310.5 265 59.2
Lj1g0001826 Lotus japonicus HOM05D005840 ORTHO05D007144 3.1e-82 309.3 303 56.4
MD07G1299300 Malus domestica HOM05D005840 ORTHO05D007144 3.1e-82 309.3 287 57.8
Lj3P895T18 Lonicera japonica HOM05D005840 ORTHO05D007144 2.7e-81 306.2 223 66.8
FAN01G0139 Fragaria x ananassa HOM05D005840 ORTHO05D007144 5.9e-81 305.1 288 59.0
CiPaw.06G041000 Carya illinoinensis HOM05D005840 ORTHO05D007144 1.0e-80 304.3 216 66.7
Sc19g0000580 Simmondsia chinensis HOM05D005840 ORTHO05D007144 2.3e-80 303.1 272 55.5
CANSAT21G1965 Cannabis sativa HOM05D005840 ORTHO05D007144 3.8e-80 302.4 291 57.4
Actinidia34271 Actinidia chinensis HOM05D005840 ORTHO05D007144 5.0e-80 302.0 209 67.9
MD01G1228500 Malus domestica HOM05D005840 ORTHO05D007144 6.6e-80 301.6 265 59.2
A09p06480 Brassica napus HOM05D005840 ORTHO05D007144 8.6e-80 301.2 298 56.7
Cc11_g13290 Coffea canephora HOM05D005840 ORTHO05D007144 8.6e-80 301.2 239 69.0
BraA09t36291Z Brassica rapa HOM05D005840 ORTHO05D007144 1.1e-79 300.8 298 56.4
Sp2g22870 Schrenkiella parvula HOM05D005840 ORTHO05D007144 1.5e-79 300.4 298 56.4
THA.LOC104798983 Tarenaya hassleriana HOM05D005840 ORTHO05D007144 1.5e-79 300.4 292 56.5
Gohir.D11G016500 Gossypium hirsutum HOM05D005840 ORTHO05D007144 5.6e-79 298.5 277 57.4
Gorai.004G125300 Gossypium raimondii HOM05D005840 ORTHO05D007144 7.3e-79 298.1 274 58.4
AT5G24460 Arabidopsis thaliana HOM05D005840 ORTHO05D007144 9.5e-79 297.7 276 56.2
CARHR188950 Cardamine hirsuta HOM05D005840 ORTHO05D007144 1.2e-78 297.4 276 58.0
Gohir.A11G016700 Gossypium hirsutum HOM05D005840 ORTHO05D007144 1.2e-78 297.4 272 59.6
vmacro22785 Vaccinium macrocarpon HOM05D005840 ORTHO05D007144 1.2e-78 297.4 329 51.1
MELO3C005919.2 Cucumis melo HOM05D005840 ORTHO05D007144 1.6e-78 297.0 281 54.4
Aa31LG11G3710 Aethionema arabicum HOM05D005840 ORTHO05D007144 2.1e-78 296.6 300 54.7
Thhalv10005309m.g Eutrema salsugineum HOM05D005840 ORTHO05D007144 2.1e-78 296.6 298 55.0
BolC9t53635H Brassica oleracea HOM05D005840 ORTHO05D007144 3.6e-78 295.8 299 56.9
Phvul.009G044800 Phaseolus vulgaris HOM05D005840 ORTHO05D007144 3.6e-78 295.8 295 56.9
Gorai.007G017300 Gossypium raimondii HOM05D005840 ORTHO05D007144 6.1e-78 295.0 277 57.4
Gohir.A08G104700 Gossypium hirsutum HOM05D005840 ORTHO05D007144 1.0e-77 294.3 274 57.7
VMungo1309G2416 Vigna mungo HOM05D005840 ORTHO05D007144 1.0e-77 294.3 296 57.1
AL6G36040 Arabidopsis lyrata HOM05D005840 ORTHO05D007144 1.8e-77 293.5 301 54.5
Glyma.06G136800 Glycine max HOM05D005840 ORTHO05D007144 1.8e-77 293.5 294 54.8
BcaC04g23543 Brassica carinata HOM05D005840 ORTHO05D007144 2.3e-77 293.1 298 56.0
C09p07230 Brassica napus HOM05D005840 ORTHO05D007144 2.3e-77 293.1 298 56.0
Rhsim03G0215700 Rhododendron simsii HOM05D005840 ORTHO05D007144 2.3e-77 293.1 227 64.3
PSO063G5360 Papaver somniferum HOM05D005840 ORTHO05D007144 5.2e-77 292.0 301 55.5
Sed0003210 Sechium edule HOM05D005840 ORTHO05D007144 5.2e-77 292.0 286 57.3
ClCG01G000060 Citrullus lanatus HOM05D005840 ORTHO05D007144 1.5e-76 290.4 234 61.5
Carub.0006s2229 Capsella rubella HOM05D005840 ORTHO05D007144 2.0e-76 290.0 277 58.5
Ah.13g070770 Amaranthus hybridus HOM05D005840 ORTHO05D007144 5.7e-76 288.5 291 54.6
AUR62028079 Chenopodium quinoa HOM05D005840 ORTHO05D007144 7.5e-76 288.1 300 53.3
Glyma.04G228100 Glycine max HOM05D005840 ORTHO05D007144 9.8e-76 287.7 302 54.3
A06p35290 Brassica napus HOM05D005840 ORTHO05D007144 1.1e-74 284.3 295 54.6
MBI12_g45814_MAGBIO Magnolia biondii HOM05D005840 ORTHO05D007144 1.4e-74 283.9 272 54.8
AUR62005991 Chenopodium quinoa HOM05D005840 ORTHO05D007144 2.4e-74 283.1 294 54.1
Haze_00300 Corylus avellana HOM05D005840 ORTHO05D007144 2.4e-74 283.1 207 66.7
ECA232G4892 Erigeron canadensis HOM05D005840 ORTHO05D007144 2.4e-74 283.1 210 63.3
CsaV3_5G000100 Cucumis sativus L. HOM05D005840 ORTHO05D007144 4.1e-74 282.3 275 52.4
BcaNung01236 Brassica carinata HOM05D005840 ORTHO05D007144 3.5e-73 279.3 301 53.2
COL.COLO4_14373 Corchorus olitorius HOM05D005840 ORTHO05D007144 3.5e-73 279.3 217 64.1
BraA06t26455Z Brassica rapa HOM05D005840 ORTHO05D007144 5.9e-73 278.5 308 52.6
EL10Ac3g05171 Beta vulgaris HOM05D005840 ORTHO05D007144 1.9e-71 273.5 213 62.0
BcaB04g19821 Brassica carinata HOM05D005840 ORTHO05D007144 7.3e-71 271.6 224 62.5
C07p43220 Brassica napus HOM05D005840 ORTHO05D007144 7.3e-71 271.6 224 62.5
vmacro06444 Vaccinium macrocarpon HOM05D005840 ORTHO05D007144 1.2e-70 270.8 271 53.9
PSO782G2283 Papaver somniferum HOM05D005840 ORTHO05D007144 2.3e-69 266.5 209 62.7
Actinidia08699 Actinidia chinensis HOM05D005840 ORTHO05D007144 1.5e-68 263.8 212 61.3
unitig_0.g2444 Utricularia gibba HOM05D005840 ORTHO05D007144 4.4e-68 262.3 202 61.9
CDE04G1956 Ceratophyllum demersum HOM05D005840 ORTHO05D007144 5.8e-68 261.9 221 59.3
unitig_92.g28240 Utricularia gibba HOM05D005840 ORTHO05D007144 9.8e-68 261.2 200 64.5
Aqoxy6G02459 Aquilegia oxysepala HOM05D005840 ORTHO05D007144 1.3e-67 260.8 280 52.1
Aqoxy6G02489 Aquilegia oxysepala HOM05D005840 ORTHO05D007144 1.3e-67 260.8 280 52.1
CDE12G0905 Ceratophyllum demersum HOM05D005840 ORTHO05D007144 1.3e-64 250.8 208 59.1
Sed0025728 Sechium edule HOM05D005840 ORTHO05D007144 1.9e-63 246.9 209 58.4
ATR0661G235 Amborella trichopoda HOM05D005840 ORTHO05D007144 5.1e-56 222.2 217 54.4
HPP92_022381 Vanilla planifolia HOM05D005840 ORTHO05D007144 4.7e-54 215.7 215 55.3
SHI02291 Sapria himalayana HOM05D005840 ORTHO05D007144 7.6e-52 208.4 210 52.9
SEGI_38224 Sequoiadendron giganteum HOM05D005840 ORTHO05D007144 1.7e-51 207.2 200 52.0
BcaB04g19819 Brassica carinata HOM05D005840 ORTHO05D007144 8.4e-51 204.9 189 57.7
COL.COLO4_12096 Corchorus olitorius HOM05D005840 ORTHO05D007144 1.2e-41 174.5 176 54.0
Mapoly0031s0111 Marchantia polymorpha HOM05D005840 ORTHO05D007144 1.2e-41 174.5 219 45.7
Zm00001eb272540 Zea mays HOM05D005840 ORTHO05D007144 1.5e-39 167.5 223 48.0
Pp3c3_29470 Physcomitrium patens HOM05D005840 ORTHO05D007144 2.5e-39 166.8 237 42.2
SMO140G0013 Selaginella moellendorffii HOM05D005840 ORTHO05D007144 9.6e-39 164.9 217 41.5
COL.COLO4_35601 Corchorus olitorius HOM05D005840 ORTHO05D007144 1.8e-37 160.6 210 42.9
Os06g0712200 Oryza sativa ssp. japonica HOM05D005840 ORTHO05D007144 2.4e-37 160.2 226 45.1
BcaNung02020 Brassica carinata HOM05D005840 ORTHO05D007144 9.9e-36 154.8 129 63.6
CBR_g20004 Chara braunii HOM05D005840 ORTHO05D007144 9.3e-34 148.3 174 50.0
BcaB04g19822 Brassica carinata HOM05D005840 ORTHO05D007144 1.8e-29 134.0 121 58.7
CAN.G2.4 Capsicum annuum HOM05D005840 ORTHO05D007144 3.4e-28 129.8 78 82.1
Gohir.D08G116401 Gossypium hirsutum HOM05D005840 ORTHO05D007144 4.9e-27 125.9 115 57.4
Duzib114G0266 Durio zibethinus HOM05D005840 ORTHO05D007144 5.6e-23 112.5 150 42.0
SalBow4G0698 Salvia bowleyana HOM05D001856 ORTHO05D007144 2.9e-19 100.1 86 59.3
SalBow6G2140 Salvia bowleyana HOM05D005840 ORTHO05D007144 3.5e-17 93.2 61 68.9
Cre01.g012300 Chlamydomonas reinhardtii HOM05D005840 ORTHO05D007144 1.2e-12 78.2 148 36.5
COL.COLO4_35602 Corchorus olitorius HOM05D005840 ORTHO05D007144 5.9e-12 75.9 87 44.8
Potri.010G149800 Populus trichocarpa HOM05D005840 ORTHO05D007144 2.9e-11 73.6 74 50.0


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