Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g021570 Solanum pennellii HOM05D000679 ORTHO05D000137 2.9e-140 501.9 256 100.0
Sopen06g011260 Solanum pennellii HOM05D000679 ORTHO05D000137 1.8e-86 323.2 330 58.5
Sopen10g007210 Solanum pennellii HOM05D000679 ORTHO05D000137 2.0e-80 303.1 364 51.6
Sopen08g014670 Solanum pennellii HOM05D000679 ORTHO05D000482 3.2e-78 295.8 260 63.8
Solyc07g008677.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 7.8e-77 291.2 348 50.9
Sopen01g022800 Solanum pennellii HOM05D000679 ORTHO05D000482 2.1e-74 283.1 236 66.5
Sopen06g003810 Solanum pennellii HOM05D000679 ORTHO05D000137 6.2e-74 281.6 396 46.2
Sopen05g027230 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-65 251.5 478 37.9
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 2.4e-62 243.0 501 36.3
Sopen12g007430 Solanum pennellii HOM05D000679 ORTHO05D000137 2.4e-62 243.0 501 36.3
Solyc05g015130.1 Solanum lycopersicum HOM05D000679 ORTHO05D000482 1.0e-60 237.7 171 73.1
Sopen03g006990 Solanum pennellii HOM05D000679 ORTHO05D000137 2.3e-60 236.5 325 46.8
Solyc03g034332.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 3.3e-59 232.6 163 76.1
Solyc01g094727.1 Solanum lycopersicum HOM05D000679 ORTHO05D000482 3.4e-56 222.6 161 73.3
Sopen07g014970 Solanum pennellii HOM05D000679 ORTHO05D000482 5.3e-49 198.7 134 79.1
Sopen11g024470 Solanum pennellii HOM05D000679 ORTHO05D000482 7.1e-46 188.3 130 76.9
Solyc10g076945.1 Solanum lycopersicum HOM05D000679 ORTHO05D000482 1.2e-37 161.0 112 75.9
Solyc08g045737.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 8.7e-28 128.3 74 85.1
Solyc03g034203.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.9e-27 127.1 76 81.6
Solyc10g076970.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 4.3e-27 125.9 74 82.4
Solyc05g150115.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.1e-25 121.3 74 79.7
Solyc08g016583.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 5.3e-25 119.0 72 80.6
Solyc08g044337.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 5.3e-25 119.0 74 78.4
Solyc08g074525.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 5.3e-25 119.0 74 78.4
Sopen06g003040 Solanum pennellii HOM05D000679 ORTHO05D000137 5.3e-25 119.0 74 78.4
Solyc08g014618.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 6.9e-25 118.6 74 78.4
Solyc09g020160.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 9.0e-25 118.2 74 78.4
Solyc01g066915.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 7.6e-24 115.2 72 77.8
Solyc01g094723.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 6.5e-23 112.1 74 74.3
Sopen07g014960 Solanum pennellii HOM05D000679 ORTHO05D000482 2.1e-21 107.1 242 36.0
Sopen01g053420 Solanum pennellii HOM05D000679 ORTHO05D014266 3.9e-20 102.8 85 68.2
Sopen00g010790 Solanum pennellii HOM05D000679 ORTHO05D000137 2.6e-16 90.1 52 80.8
PGSC0003DMG400045185 Solanum tuberosum HOM05D000679 ORTHO05D000137 2.9e-15 86.7 204 31.4
Sopen06g004830 Solanum pennellii HOM05D000679 ORTHO05D014686 8.8e-12 75.1 154 32.5
PGSC0003DMG400000873 Solanum tuberosum HOM05D000679 ORTHO05D000137 4.3e-11 72.8 74 45.9
PGSC0003DMG400042800 Solanum tuberosum HOM05D000679 ORTHO05D000137 2.2e-10 70.5 72 47.2
Sopen04g012950 Solanum pennellii HOM05D000679 ORTHO05D014686 3.7e-10 69.7 74 47.3
PGSC0003DMG400037369 Solanum tuberosum HOM05D000541 ORTHO05D000137 3.7e-10 69.7 86 43.0
CAN.G1337.31 Capsicum annuum HOM05D000541 ORTHO05D000137 5.3e-09 65.9 74 41.9
CAN.G567.45 Capsicum annuum HOM05D000679 ORTHO05D000137 1.5e-08 64.3 88 43.2
CAN.G1239.12 Capsicum annuum HOM05D000679 ORTHO05D000137 3.4e-08 63.2 69 46.4
CAN.G357.3 Capsicum annuum HOM05D000541 ORTHO05D000137 4.5e-08 62.8 71 43.7
CAN.G1166.31 Capsicum annuum HOM05D000541 ORTHO05D000137 5.9e-08 62.4 74 37.8
CAN.G141.13 Capsicum annuum HOM05D000541 ORTHO05D000137 5.9e-08 62.4 74 39.2
Sopen05g015890 Solanum pennellii HOM05D010988 ORTHO05D000137 7.7e-08 62.0 74 47.3
Sopen09g012720 Solanum pennellii HOM05D000679 ORTHO05D014686 7.7e-08 62.0 74 43.2
Sopen01g016320 Solanum pennellii HOM05D000679 ORTHO05D000482 1.0e-07 61.6 218 27.1
Nitab4.5_0011716g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.3e-07 61.2 75 44.0
PGSC0003DMG400023258 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.7e-07 60.8 75 44.0
Nitab4.5_0008901g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.9e-07 60.1 75 42.7
PGSC0003DMG400037187 Solanum tuberosum HOM05D000017 ORTHO05D001349 2.9e-07 60.1 58 50.0
CAN.G257.82 Capsicum annuum HOM05D000679 ORTHO05D000137 3.8e-07 59.7 69 46.4
CAN.G33.19 Capsicum annuum HOM05D000541 ORTHO05D000137 3.8e-07 59.7 74 40.5
CAN.G577.3 Capsicum annuum HOM05D000679 ORTHO05D000137 3.8e-07 59.7 64 50.0
Sopen12g022620 Solanum pennellii HOM05D010988 ORTHO05D000137 3.8e-07 59.7 74 45.9
CAN.G1009.2 Capsicum annuum HOM05D000541 ORTHO05D000137 5.0e-07 59.3 76 46.1
CAN.G500.47 Capsicum annuum HOM05D000541 ORTHO05D000137 5.0e-07 59.3 74 39.2
CAN.G572.43 Capsicum annuum HOM05D000679 ORTHO05D000137 5.0e-07 59.3 73 42.5
PGSC0003DMG400043182 Solanum tuberosum HOM05D000679 ORTHO05D000137 5.0e-07 59.3 73 45.2
CAN.G1007.5 Capsicum annuum HOM05D000679 ORTHO05D000137 6.5e-07 58.9 73 39.7
CAN.G185.2 Capsicum annuum HOM05D000679 ORTHO05D000137 6.5e-07 58.9 215 27.9
Sopen01g021630 Solanum pennellii HOM05D000541 ORTHO05D000137 6.5e-07 58.9 103 36.9
CAN.G1226.3 Capsicum annuum HOM05D000679 ORTHO05D000137 8.5e-07 58.5 73 42.5
CAN.G890.1 Capsicum annuum HOM05D000679 ORTHO05D000137 8.5e-07 58.5 73 43.8
Nitab4.5_0000695g0080 Nicotiana tabacum HOM05D000679 ORTHO05D000137 8.5e-07 58.5 81 38.3
Nitab4.5_0011890g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 8.5e-07 58.5 75 45.3
Nitab4.5_0013025g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 8.5e-07 58.5 75 41.3
Sopen01g007470 Solanum pennellii HOM05D000541 ORTHO05D000137 8.5e-07 58.5 76 40.8
Sopen09g020240 Solanum pennellii HOM05D010988 ORTHO05D000137 8.5e-07 58.5 74 44.6
Sopen10g020690 Solanum pennellii HOM05D000541 ORTHO05D000137 8.5e-07 58.5 76 40.8
CAN.G1036.11 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-06 58.2 74 35.1
CAN.G105.2 Capsicum annuum HOM05D000679 ORTHO05D000137 1.1e-06 58.2 73 42.5
CAN.G362.44 Capsicum annuum HOM05D000679 ORTHO05D000137 1.1e-06 58.2 73 41.1
CAN.G632.7 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-06 58.2 74 36.5
CAN.G799.13 Capsicum annuum HOM05D000679 ORTHO05D000137 1.1e-06 58.2 61 47.5
CAN.G126.27 Capsicum annuum HOM05D000679 ORTHO05D000137 1.4e-06 57.8 73 42.5
CAN.G89.22 Capsicum annuum HOM05D000679 ORTHO05D000137 1.4e-06 57.8 58 53.4
Nitab4.5_0008288g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.4e-06 57.8 75 38.7
Sopen02g001060 Solanum pennellii HOM05D000541 ORTHO05D000137 1.4e-06 57.8 76 39.5
Sopen02g032120 Solanum pennellii HOM05D000541 ORTHO05D000137 1.4e-06 57.8 76 39.5
Sopen06g002950 Solanum pennellii HOM05D000541 ORTHO05D000137 1.4e-06 57.8 76 39.5
Sopen06g004340 Solanum pennellii HOM05D000541 ORTHO05D000137 1.4e-06 57.8 76 39.5
Sopen10g005090 Solanum pennellii HOM05D000541 ORTHO05D000137 1.4e-06 57.8 76 39.5
CAN.G311.64 Capsicum annuum HOM05D000679 ORTHO05D000137 1.9e-06 57.4 73 39.7
CAN.G1864.2 Capsicum annuum HOM05D000541 ORTHO05D000137 2.5e-06 57.0 74 37.8
CAN.G314.7 Capsicum annuum HOM05D000679 ORTHO05D000137 2.5e-06 57.0 210 29.0
CAN.G321.41 Capsicum annuum HOM05D000541 ORTHO05D000137 2.5e-06 57.0 74 39.2
Nitab4.5_0000357g0130 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.5e-06 57.0 75 38.7
Nitab4.5_0014780g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.5e-06 57.0 75 40.0
Sopen04g021990 Solanum pennellii HOM05D000006 ORTHO05D000001 2.5e-06 57.0 58 48.3
Sopen08g014290 Solanum pennellii HOM05D000679 ORTHO05D014686 2.5e-06 57.0 74 39.2
Sopen10g022330 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-06 57.0 72 43.1
CAN.G1552.8 Capsicum annuum HOM05D000679 ORTHO05D000137 3.2e-06 56.6 69 43.5
CAN.G546.31 Capsicum annuum HOM05D000679 ORTHO05D000137 3.2e-06 56.6 73 41.1
CAN.G909.9 Capsicum annuum HOM05D000541 ORTHO05D000137 3.2e-06 56.6 76 39.5
Nitab4.5_0001472g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.2e-06 56.6 75 40.0
Sopen08g016200 Solanum pennellii HOM05D000541 ORTHO05D000137 3.2e-06 56.6 76 39.5
CAN.G168.11 Capsicum annuum HOM05D000541 ORTHO05D000137 4.2e-06 56.2 81 35.8
CAN.G242.13 Capsicum annuum HOM05D009195 ORTHO05D000137 4.2e-06 56.2 50 44.0
Nitab4.5_0000210g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.2e-06 56.2 75 38.7
Nitab4.5_0000802g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.2e-06 56.2 70 41.4
Nitab4.5_0003033g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.2e-06 56.2 75 40.0
Nitab4.5_0005258g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.2e-06 56.2 75 38.7
Nitab4.5_0007600g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.2e-06 56.2 75 40.0
Nitab4.5_0026672g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.2e-06 56.2 75 37.3
PGSC0003DMG400037565 Solanum tuberosum HOM05D000679 ORTHO05D000137 4.2e-06 56.2 76 44.7
CAN.G269.4 Capsicum annuum HOM05D000679 ORTHO05D000137 5.5e-06 55.8 69 40.6
CAN.G326.5 Capsicum annuum HOM05D009195 ORTHO05D016873 5.5e-06 55.8 55 38.2
CAN.G375.66 Capsicum annuum HOM05D000541 ORTHO05D000137 5.5e-06 55.8 74 36.5
CAN.G437.7 Capsicum annuum HOM05D000679 ORTHO05D000137 5.5e-06 55.8 73 41.1
Nitab4.5_0000550g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.5e-06 55.8 75 38.7
Nitab4.5_0000610g0310 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.5e-06 55.8 74 37.8
Nitab4.5_0004979g0150 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.5e-06 55.8 75 40.0
Nitab4.5_0015310g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.5e-06 55.8 74 41.9
Sopen02g012120 Solanum pennellii HOM05D000541 ORTHO05D000137 5.5e-06 55.8 76 38.2
Sopen05g013610 Solanum pennellii HOM05D000541 ORTHO05D000137 5.5e-06 55.8 76 38.2
Sopen07g014800 Solanum pennellii HOM05D000541 ORTHO05D000137 5.5e-06 55.8 72 37.5
Sopen08g011320 Solanum pennellii HOM05D000541 ORTHO05D000137 5.5e-06 55.8 76 38.2
Sopen09g007650 Solanum pennellii HOM05D000541 ORTHO05D000137 5.5e-06 55.8 62 43.5
PGSC0003DMG400038850 Solanum tuberosum HOM05D000541 ORTHO05D000137 5.5e-06 55.8 58 46.6
CAN.G1191.13 Capsicum annuum HOM05D000679 ORTHO05D000137 7.2e-06 55.5 60 48.3
CAN.G1415.4 Capsicum annuum HOM05D000679 ORTHO05D000137 7.2e-06 55.5 73 41.1
CAN.G1463.5 Capsicum annuum HOM05D000679 ORTHO05D000137 7.2e-06 55.5 269 22.7
CAN.G261.21 Capsicum annuum HOM05D000679 ORTHO05D000137 7.2e-06 55.5 69 42.0
CAN.G745.11 Capsicum annuum HOM05D000541 ORTHO05D000137 7.2e-06 55.5 76 39.5
Sopen01g017990 Solanum pennellii HOM05D000541 ORTHO05D000137 7.2e-06 55.5 63 46.0
Sopen05g020660 Solanum pennellii HOM05D000541 ORTHO05D000137 7.2e-06 55.5 63 46.0
CAN.G1089.23 Capsicum annuum HOM05D000679 ORTHO05D000137 9.4e-06 55.1 69 42.0
CAN.G273.9 Capsicum annuum HOM05D000541 ORTHO05D000137 9.4e-06 55.1 60 41.7
CAN.G607.14 Capsicum annuum HOM05D000541 ORTHO05D000137 9.4e-06 55.1 74 36.5
Nitab4.5_0001446g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.4e-06 55.1 87 35.6
Nitab4.5_0002495g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.4e-06 55.1 75 41.3
Nitab4.5_0006628g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.4e-06 55.1 75 38.7
Sopen01g006800 Solanum pennellii HOM05D000004 ORTHO05D000002 9.4e-06 55.1 76 38.2
Sopen12g022790 Solanum pennellii HOM05D000541 ORTHO05D000137 9.4e-06 55.1 76 38.2
PGSC0003DMG400012717 Solanum tuberosum HOM05D000541 ORTHO05D000137 9.4e-06 55.1 77 40.3


User provided reference genes

Program Settings