Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g020080 Solanum pennellii HOM05D000107 ORTHO05D000062 2.4e-47 191.8 94 100.0
Sopen09g020930 Solanum pennellii HOM05D000107 ORTHO05D000062 5.8e-38 160.6 90 86.7
PGSC0003DMG400011670 Solanum tuberosum HOM05D000107 ORTHO05D000062 3.3e-33 144.8 91 72.5
Lalb_Chr10g0094831 Lupinus albus HOM05D000107 ORTHO05D000062 1.3e-26 122.9 85 63.5
CAN.G183.28 Capsicum annuum HOM05D000211 ORTHO05D011198 2.4e-23 112.1 73 67.1
Sopen08g018280 Solanum pennellii HOM05D000107 ORTHO05D000695 1.0e-18 96.7 76 52.6
Psat5g178040 Pisum sativum HOM05D002954 ORTHO05D003353 2.3e-18 95.5 64 62.5
Psat2g020120 Pisum sativum HOM05D002954 ORTHO05D000062 3.0e-18 95.1 64 64.1
Psat0s2772g0120 Pisum sativum HOM05D000107 ORTHO05D000062 7.4e-17 90.5 86 51.2
Sopen11g015850 Solanum pennellii HOM05D000107 ORTHO05D000062 7.4e-17 90.5 77 50.6
Solyc05g042155.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 2.4e-15 85.5 60 56.7
Psat0s2381g0040 Pisum sativum HOM05D000107 ORTHO05D000062 6.9e-15 84.0 86 47.7
Psat0s472g0040 Pisum sativum HOM05D000107 ORTHO05D000062 6.9e-15 84.0 86 47.7
TPR.G13772 Trifolium pratense HOM05D000107 ORTHO05D000062 2.2e-13 79.0 83 49.4
Lj1g0012478 Lotus japonicus HOM05D000107 ORTHO05D000062 1.1e-12 76.6 76 46.1
Psat3g063200 Pisum sativum HOM05D002954 ORTHO05D003353 1.1e-12 76.6 88 45.5
TPR.G34598 Trifolium pratense HOM05D000107 ORTHO05D000062 1.9e-12 75.9 89 41.6
Psat6g201280 Pisum sativum HOM05D000107 ORTHO05D000062 4.2e-12 74.7 78 48.7
Solyc09g030515.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 7.2e-12 73.9 58 50.0
Ca_02604_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 9.4e-12 73.6 83 47.0
Solyc05g042015.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 2.1e-11 72.4 54 50.0
Ca_11754_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 3.6e-11 71.6 83 45.8
Psat6g199080 Pisum sativum HOM05D000107 ORTHO05D000062 3.6e-11 71.6 69 52.2
Ca_02605_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.6e-11 71.2 83 47.0
Ca_23803_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.0e-10 70.1 83 44.6
Ca_23808_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.4e-10 69.7 82 45.1
Lalb_Chr15g0082681 Lupinus albus HOM05D000107 ORTHO05D000062 3.0e-10 68.6 51 62.7
CAN.G501.3 Capsicum annuum HOM05D000107 ORTHO05D000062 6.7e-10 67.4 52 51.9
Psat4g189240 Pisum sativum HOM05D000107 ORTHO05D000062 8.8e-10 67.0 78 44.9
Solyc08g015833.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 2.2e-08 62.4 58 44.8
EL10Ac2g03157 Beta vulgaris HOM05D000107 ORTHO05D000062 2.8e-08 62.0 57 47.4
Ca_14703_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 3.7e-08 61.6 45 55.6
EL10Ac2g03191 Beta vulgaris HOM05D000107 ORTHO05D000062 1.1e-07 60.1 70 41.4
TAR003G0008 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.1e-07 60.1 85 36.5
Sopen04g016700 Solanum pennellii HOM05D000107 ORTHO05D000062 1.4e-07 59.7 46 50.0
Os02g0543900 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 4.1e-07 58.2 91 37.4
Psat1g138720 Pisum sativum HOM05D000107 ORTHO05D000062 4.1e-07 58.2 70 45.7
TAR165G0003 Trochodendron aralioides HOM05D000107 ORTHO05D000062 9.1e-07 57.0 85 34.1
TAR528G0005 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.5e-06 56.2 85 35.3
EL10Ac3g06709 Beta vulgaris HOM05D000107 ORTHO05D000062 2.6e-06 55.5 69 39.1
TAR472G0001 Trochodendron aralioides HOM05D000107 ORTHO05D000062 3.4e-06 55.1 69 36.2
AUR62040758 Chenopodium quinoa HOM05D006468 ORTHO05D006908 5.9e-06 54.3 73 41.1
Os01g0768600 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 5.9e-06 54.3 88 34.1
TAR211G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 5.9e-06 54.3 71 38.0


User provided reference genes

Program Settings