Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g019390 Solanum pennellii HOM05D001081 ORTHO05D024763 4.7e-61 237.7 117 100.0
Solyc03g083130.3 Solanum lycopersicum HOM05D001081 ORTHO05D004708 1.4e-41 172.9 123 75.6
Sopen03g022900 Solanum pennellii HOM05D001081 ORTHO05D004708 1.4e-41 172.9 123 75.6
Solyc03g071810.1 Solanum lycopersicum HOM05D001081 ORTHO05D024763 5.5e-38 161.0 108 78.7
CAN.G481.14 Capsicum annuum HOM05D001081 ORTHO05D004708 2.7e-32 142.1 130 66.9
Nitab4.5_0000548g0110 Nicotiana tabacum HOM05D001081 ORTHO05D004708 2.3e-31 139.0 129 61.2
Peaxi162Scf00740g00138 Petunia axillaris HOM05D001081 ORTHO05D004708 4.4e-27 124.8 124 59.7
CAN.G277.1 Capsicum annuum HOM05D001081 ORTHO05D024763 6.4e-18 94.4 106 56.6
Dinv35339 Davidia involucrata HOM05D001081 ORTHO05D004708 9.5e-14 80.5 123 42.3
TAR375G0280 Trochodendron aralioides HOM05D001081 ORTHO05D004708 1.1e-12 77.0 126 42.9
CSS0032097 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D004708 1.2e-11 73.6 123 39.8
Lj1C1018T17 Lonicera japonica HOM05D001081 ORTHO05D004708 4.4e-11 71.6 122 36.9
Rhsim03G0209100 Rhododendron simsii HOM05D001081 ORTHO05D004708 4.4e-11 71.6 127 35.4
Hma1.2p1_0404F.1_g145360 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 5.8e-11 71.2 123 39.8
Oeu041052.4 Olea europaea HOM05D001081 ORTHO05D004708 1.7e-10 69.7 99 40.4
vmacro06386 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 4.9e-10 68.2 103 39.8
CAN.G39.28 Capsicum annuum HOM05D001081 ORTHO05D024763 6.4e-10 67.8 85 51.8
SGA_v2.0_scaffold192G40538 Striga asiatica HOM05D001081 ORTHO05D004708 8.3e-10 67.4 111 38.7
QL09p008772 Quercus lobata HOM05D001081 ORTHO05D004708 1.1e-09 67.0 122 36.1
QL09p008909 Quercus lobata HOM05D001081 ORTHO05D004708 1.1e-09 67.0 122 36.1
CANSAT21G0069 Cannabis sativa HOM05D001081 ORTHO05D004708 2.4e-09 65.9 124 37.9
Ciclev10018477m.g Citrus clementina HOM05D001081 ORTHO05D004708 2.4e-09 65.9 99 38.4
GSVIVG01038555001 Vitis vinifera HOM05D001081 ORTHO05D004708 2.4e-09 65.9 122 35.2
Migut.F00209 Erythranthe guttata HOM05D001081 ORTHO05D004708 5.4e-09 64.7 100 41.0
Nn1g00260 Nelumbo nucifera HOM05D001081 ORTHO05D004708 5.4e-09 64.7 100 41.0
Lj1C1020T7 Lonicera japonica HOM05D001081 ORTHO05D004708 9.2e-09 63.9 120 35.8
Cfa016233 Carpinus fangiana HOM05D001081 ORTHO05D004708 1.2e-08 63.5 125 36.0
Atru.chr12.2203 Acer truncatum HOM05D001081 ORTHO05D004708 1.6e-08 63.2 121 33.1
Lj4g0008522 Lotus japonicus HOM05D001081 ORTHO05D004708 2.1e-08 62.8 119 35.3
DCAR_008928 Daucus carota HOM05D001081 ORTHO05D004708 2.7e-08 62.4 123 37.4
Eucgr.G00091 Eucalyptus grandis HOM05D001081 ORTHO05D004708 2.7e-08 62.4 122 32.8
Actinidia08651 Actinidia chinensis HOM05D001081 ORTHO05D004708 3.5e-08 62.0 99 38.4
TWI39G0445 Tripterygium wilfordii HOM05D001081 ORTHO05D004708 7.8e-08 60.8 121 33.9
Lsat_1_v5_gn_8_5261 Lactuca sativa HOM05D001081 ORTHO05D004708 1.0e-07 60.5 132 35.6
Eucgr.G00110 Eucalyptus grandis HOM05D001081 ORTHO05D004708 1.7e-07 59.7 94 38.3
Eucgr.H05019 Eucalyptus grandis HOM05D001081 ORTHO05D004708 1.7e-07 59.7 122 32.0
Eucgr.K00385 Eucalyptus grandis HOM05D001081 ORTHO05D004708 1.7e-07 59.7 94 38.3
Manes.01G183500 Manihot esculenta HOM05D001081 ORTHO05D004708 3.0e-07 58.9 125 36.0
Haze_00208 Corylus avellana HOM05D001081 ORTHO05D004708 3.9e-07 58.5 63 47.6
Cpa.g.sc3.89 Carica papaya HOM05D001081 ORTHO05D004708 5.1e-07 58.2 133 33.8
Sabra12G0016000 Salix brachista HOM05D001081 ORTHO05D004708 5.1e-07 58.2 101 37.6
Gohir.A11G015200 Gossypium hirsutum HOM05D001081 ORTHO05D004708 8.6e-07 57.4 122 29.5
Sabra11G0071600 Salix brachista HOM05D001081 ORTHO05D004708 1.1e-06 57.0 101 36.6
HanXRQChr08g0225331 Helianthus annuus HOM05D001081 ORTHO05D004708 1.9e-06 56.2 98 38.8
Potri.012G016100 Populus trichocarpa HOM05D001081 ORTHO05D004708 1.9e-06 56.2 101 35.6
TPR.G12082 Trifolium pratense HOM05D001081 ORTHO05D004708 1.9e-06 56.2 120 34.2
MBI06_g13415_MAGBIO Magnolia biondii HOM05D001081 ORTHO05D004708 2.5e-06 55.8 103 35.9
HanXRQChr08g0225271 Helianthus annuus HOM05D001081 ORTHO05D003320 5.6e-06 54.7 99 40.4
FvH4_7g31550 Fragaria vesca HOM05D001081 ORTHO05D004708 7.3e-06 54.3 104 32.7
Gorai.007G015700 Gossypium raimondii HOM05D001081 ORTHO05D004708 9.5e-06 53.9 122 28.7
Medtr1g008050 Medicago truncatula HOM05D001081 ORTHO05D004708 9.5e-06 53.9 122 32.8
Thecc.03G199500 Theobroma cacao HOM05D001081 ORTHO05D004708 9.5e-06 53.9 94 36.2


User provided reference genes

Program Settings