Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g016280 Solanum pennellii HOM05D004064 ORTHO05D009909 2.7e-75 285.4 161 100.0
Sopen10g015440 Solanum pennellii HOM05D010431 ORTHO05D010855 5.4e-52 208.0 170 67.6
PGSC0003DMG400035494 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.1e-40 169.5 105 79.0
Sopen03g026910 Solanum pennellii HOM05D000004 ORTHO05D010855 2.9e-37 159.1 170 56.5
PGSC0003DMG400035967 Solanum tuberosum HOM05D010431 ORTHO05D016891 2.0e-30 136.3 140 57.1
Sopen01g007650 Solanum pennellii HOM05D010431 ORTHO05D009909 3.8e-29 132.1 140 60.0
Sopen01g032040 Solanum pennellii HOM05D010431 ORTHO05D016891 7.9e-19 97.8 133 45.9
CAN.G278.18 Capsicum annuum HOM05D004064 ORTHO05D009909 4.1e-15 85.5 100 42.0
Nitab4.5_0007771g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.1e-15 85.5 134 37.3
PGSC0003DMG400007543 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.0e-13 80.9 115 35.7
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.8e-13 79.0 107 41.1
PGSC0003DMG400047205 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.5e-12 76.3 117 35.0
Solyc03g096700.3 Solanum lycopersicum HOM05D010431 ORTHO05D010855 3.2e-12 75.9 117 53.0
PGSC0003DMG400043109 Solanum tuberosum HOM05D004064 ORTHO05D009909 4.2e-12 75.5 104 40.4
PGSC0003DMG400001699 Solanum tuberosum HOM05D004064 ORTHO05D009909 6.1e-11 71.6 107 39.3
Sopen04g024150 Solanum pennellii HOM05D004064 ORTHO05D009909 8.0e-11 71.2 109 39.4
PGSC0003DMG400045086 Solanum tuberosum HOM05D004064 ORTHO05D009909 8.0e-11 71.2 108 38.9
PGSC0003DMG400038561 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.4e-10 70.5 95 36.8
PGSC0003DMG401018257 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.3e-10 69.7 97 35.1
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 3.9e-10 68.9 107 36.4
Sopen09g017060 Solanum pennellii HOM05D010431 ORTHO05D016891 6.7e-10 68.2 93 50.5
Nitab4.5_0029420g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.0e-09 66.6 104 39.4
PGSC0003DMG400045567 Solanum tuberosum HOM05D004064 ORTHO05D037746 2.6e-09 66.2 95 34.7
Nitab4.5_0006429g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.4e-09 65.5 103 37.9
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.7e-09 65.1 104 37.5
CAN.G127.19 Capsicum annuum HOM05D004064 ORTHO05D009909 7.4e-09 64.7 108 35.2
CAN.G1289.3 Capsicum annuum HOM05D004064 ORTHO05D009909 1.3e-08 63.9 135 33.3
Sopen04g011640 Solanum pennellii HOM05D004064 ORTHO05D009909 1.7e-08 63.5 102 37.3
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.2e-08 63.2 96 37.5
Nitab4.5_0009261g0010 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.8e-08 62.8 112 35.7
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.4e-07 60.5 105 35.2
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-07 60.1 108 37.0
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 1.8e-07 60.1 108 37.0
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 1.8e-07 60.1 108 37.0
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 4.1e-07 58.9 108 37.0
Nitab4.5_0001461g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.0e-07 58.2 95 36.8
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 7.0e-07 58.2 100 33.0
Nitab4.5_0000161g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009909 9.1e-07 57.8 106 34.0
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 9.1e-07 57.8 96 32.3
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 9.1e-07 57.8 96 32.3
Sopen07g020390 Solanum pennellii HOM05D000017 ORTHO05D011910 9.1e-07 57.8 96 32.3
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 9.1e-07 57.8 96 32.3
Solyc04g039737.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 1.2e-06 57.4 94 29.8
Sopen12g026480 Solanum pennellii HOM05D000017 ORTHO05D009561 1.2e-06 57.4 110 37.3
CAN.G1724.2 Capsicum annuum HOM05D002537 ORTHO05D002751 1.6e-06 57.0 91 38.5
Nitab4.5_0000256g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.6e-06 57.0 94 33.0
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-06 57.0 108 36.1
Nitab4.5_0008075g0060 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.0e-06 56.6 95 32.6
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 2.0e-06 56.6 103 32.0
Sopen03g024100 Solanum pennellii HOM05D004064 ORTHO05D009909 2.6e-06 56.2 108 35.2
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 3.5e-06 55.8 103 31.1
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 4.5e-06 55.5 109 36.7
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.9e-06 55.1 75 36.0
Nitab4.5_0009937g0030 Nicotiana tabacum HOM05D006921 ORTHO05D009185 5.9e-06 55.1 95 33.7
Sopen08g011770 Solanum pennellii HOM05D004064 ORTHO05D009909 5.9e-06 55.1 91 38.5


User provided reference genes

Program Settings