Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g013310 Solanum pennellii HOM05D000047 ORTHO05D001383 5.9e-50 200.7 109 100.0
Sopen12g019430 Solanum pennellii HOM05D010883 ORTHO05D012839 1.8e-30 136.0 90 81.1
Sopen01g028490 Solanum pennellii HOM05D000047 ORTHO05D000044 2.8e-28 128.6 87 79.3
Sopen06g006960 Solanum pennellii HOM05D021371 ORTHO05D018133 3.1e-27 125.2 87 78.2
Sopen00g012370 Solanum pennellii HOM05D010883 ORTHO05D012839 1.7e-25 119.4 84 73.8
Sopen05g014160 Solanum pennellii HOM05D000047 ORTHO05D001383 1.7e-25 119.4 87 72.4
Sopen10g005940 Solanum pennellii HOM05D000047 ORTHO05D011806 2.5e-24 115.5 87 72.4
Sopen09g010930 Solanum pennellii HOM05D000047 ORTHO05D000044 7.2e-24 114.0 87 73.6
Sopen06g006560 Solanum pennellii HOM05D000047 ORTHO05D000044 1.2e-23 113.2 77 77.9
Sopen02g001360 Solanum pennellii HOM05D000691 ORTHO05D001383 1.8e-22 109.4 82 76.8
PGSC0003DMG400043032 Solanum tuberosum HOM05D000047 ORTHO05D001383 5.2e-22 107.8 77 71.4
Sopen09g016430 Solanum pennellii HOM05D000047 ORTHO05D010949 6.8e-22 107.5 94 68.1
CAN.G1180.13 Capsicum annuum HOM05D000047 ORTHO05D001383 1.2e-21 106.7 85 68.2
Sopen01g010880 Solanum pennellii HOM05D000004 ORTHO05D012839 2.6e-21 105.5 70 80.0
Sopen01g007890 Solanum pennellii HOM05D000047 ORTHO05D001383 3.4e-21 105.1 109 57.8
Sopen10g018410 Solanum pennellii HOM05D000047 ORTHO05D001383 3.4e-21 105.1 68 76.5
Sopen12g017880 Solanum pennellii HOM05D000047 ORTHO05D001383 5.7e-21 104.4 81 70.4
Sopen05g014380 Solanum pennellii HOM05D000047 ORTHO05D001383 2.8e-20 102.1 87 67.8
CAN.G1967.2 Capsicum annuum HOM05D002351 ORTHO05D002501 1.4e-19 99.8 83 61.4
CAN.G896.8 Capsicum annuum HOM05D002351 ORTHO05D002501 1.4e-19 99.8 83 61.4
Sopen09g015060 Solanum pennellii HOM05D000047 ORTHO05D001383 7.0e-11 70.9 81 51.9
Potri.001G184575 Populus trichocarpa HOM05D000047 ORTHO05D001383 6.6e-09 64.3 86 36.0
Sopen04g015090 Solanum pennellii HOM05D000047 ORTHO05D006740 6.6e-09 64.3 51 60.8
FvH4_6g13112 Fragaria vesca HOM05D000047 ORTHO05D001383 8.6e-09 63.9 76 47.4
TWI12G0387 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 8.6e-09 63.9 78 47.4
TWI18G1375 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 8.6e-09 63.9 78 47.4
FvH4_4g22271 Fragaria vesca HOM05D000047 ORTHO05D001383 2.5e-08 62.4 76 46.1
Potri.001G433100 Populus trichocarpa HOM05D000047 ORTHO05D001383 2.5e-08 62.4 86 33.7
FvH4_2g15191 Fragaria vesca HOM05D000047 ORTHO05D001383 3.3e-08 62.0 76 46.1
QL93p0305_0012 Quercus lobata HOM05D000047 ORTHO05D000044 7.3e-08 60.8 85 43.5
Sopen09g023170 Solanum pennellii HOM05D000047 ORTHO05D000044 9.5e-08 60.5 58 67.2
Potri.010G156001 Populus trichocarpa HOM05D000047 ORTHO05D001383 1.6e-07 59.7 86 31.4
QL06p019599 Quercus lobata HOM05D000047 ORTHO05D000044 2.1e-07 59.3 85 42.4
Sopen09g026480 Solanum pennellii HOM05D000047 ORTHO05D001383 2.1e-07 59.3 51 58.8
QL04p030580 Quercus lobata HOM05D000047 ORTHO05D000044 2.8e-07 58.9 85 42.4
QL06p007831 Quercus lobata HOM05D000047 ORTHO05D000044 2.8e-07 58.9 85 42.4
QL93p0181_0006 Quercus lobata HOM05D000047 ORTHO05D000044 2.8e-07 58.9 85 42.4
ClCG09G014410 Citrullus lanatus HOM05D000047 ORTHO05D001383 3.6e-07 58.5 81 44.4
QL05p044848 Quercus lobata HOM05D000047 ORTHO05D000044 3.6e-07 58.5 85 42.4
QL07p033814 Quercus lobata HOM05D000047 ORTHO05D000044 3.6e-07 58.5 85 42.4
Hund00850 Selenicereus undatus HOM05D000047 ORTHO05D001383 3.6e-07 58.5 111 43.2
FvH4_3g26704 Fragaria vesca HOM05D000047 ORTHO05D001383 6.2e-07 57.8 76 44.7
FvH4_7g03661 Fragaria vesca HOM05D000047 ORTHO05D001383 8.0e-07 57.4 81 42.0
FAN07G2335 Fragaria x ananassa HOM05D000380 ORTHO05D000561 8.0e-07 57.4 89 40.4
QL01p017897 Quercus lobata HOM05D000047 ORTHO05D000044 8.0e-07 57.4 85 42.4
FvH4_3g22806 Fragaria vesca HOM05D000047 ORTHO05D001383 2.3e-06 55.8 76 43.4
Hund04095 Selenicereus undatus HOM05D000047 ORTHO05D001383 2.3e-06 55.8 81 43.2
Sopen10g011330 Solanum pennellii HOM05D000047 ORTHO05D010949 2.3e-06 55.8 82 46.3
Potri.018G077983 Populus trichocarpa HOM05D000047 ORTHO05D001383 3.1e-06 55.5 86 30.2
QL12p042854 Quercus lobata HOM05D000047 ORTHO05D000044 3.1e-06 55.5 85 40.0
Sopen07g006060 Solanum pennellii HOM05D000047 ORTHO05D000044 3.1e-06 55.5 79 39.2
COL.COLO4_09244 Corchorus olitorius HOM05D009817 ORTHO05D006740 4.0e-06 55.1 83 42.2
COL.COLO4_10629 Corchorus olitorius HOM05D009817 ORTHO05D006740 4.0e-06 55.1 78 43.6
FvH4_3g07261 Fragaria vesca HOM05D000047 ORTHO05D001383 4.0e-06 55.1 82 39.0
Sopen12g011840 Solanum pennellii HOM05D000047 ORTHO05D000044 4.0e-06 55.1 77 40.3
COL.COLO4_15563 Corchorus olitorius HOM05D009817 ORTHO05D006740 6.8e-06 54.3 78 43.6
COL.COLO4_20276 Corchorus olitorius HOM05D009817 ORTHO05D006740 6.8e-06 54.3 78 43.6
COL.COLO4_37140 Corchorus olitorius HOM05D009817 ORTHO05D006740 6.8e-06 54.3 78 43.6
COL.COLO4_37705 Corchorus olitorius HOM05D009817 ORTHO05D006740 6.8e-06 54.3 78 43.6
FAN09G2146 Fragaria x ananassa HOM05D008419 ORTHO05D008839 6.8e-06 54.3 83 42.2
FAN25G1649 Fragaria x ananassa HOM05D000047 ORTHO05D008839 6.8e-06 54.3 76 42.1
Hund10081 Selenicereus undatus HOM05D000047 ORTHO05D001383 6.8e-06 54.3 70 42.9
Hund12334 Selenicereus undatus HOM05D000047 ORTHO05D001383 6.8e-06 54.3 83 42.2
Sopen06g006810 Solanum pennellii HOM05D000047 ORTHO05D001383 6.8e-06 54.3 77 39.0
Sopen10g011260 Solanum pennellii HOM05D000047 ORTHO05D001383 8.9e-06 53.9 79 40.5


User provided reference genes

Program Settings