Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g007660 Solanum pennellii HOM05D010709 ORTHO05D010376 6.7e-88 327.4 176 100.0
PGSC0003DMG400039556 Solanum tuberosum HOM05D010709 ORTHO05D010376 1.8e-72 276.2 176 83.5
PGSC0003DMG400030371 Solanum tuberosum HOM05D010709 ORTHO05D010376 5.4e-45 184.9 186 57.5
Solyc03g150109.1 Solanum lycopersicum HOM05D010709 ORTHO05D010376 7.5e-39 164.5 90 96.7
CAN.G1095.11 Capsicum annuum HOM05D010709 ORTHO05D010376 4.9e-22 108.6 186 39.8
Hma1.2p1_1974F.1_g309630 Hydrangea macrophylla HOM05D010709 ORTHO05D010376 8.4e-14 81.3 115 39.1
Cc01_g14580 Coffea canephora HOM05D010709 ORTHO05D010376 1.4e-13 80.5 142 39.4
PGSC0003DMG400037398 Solanum tuberosum HOM05D010709 ORTHO05D010376 2.1e-12 76.6 71 62.0
SGA_v2.0_scaffold54G19473 Striga asiatica HOM05D010709 ORTHO05D010376 2.7e-12 76.3 117 41.9
CSS0033974 Camellia sinensis var. sinensis HOM05D010709 ORTHO05D010376 7.9e-12 74.7 127 41.7
Rhsim13G0066500 Rhododendron simsii HOM05D010709 ORTHO05D010376 6.7e-11 71.6 122 36.9
Peaxi162Scf00540g00020 Petunia axillaris HOM05D010709 ORTHO05D010376 8.7e-11 71.2 88 48.9
Gohir.A05G107850 Gossypium hirsutum HOM05D020455 ORTHO05D010376 2.5e-10 69.7 145 31.0
Rhsim01G0239200 Rhododendron simsii HOM05D010709 ORTHO05D010376 3.3e-10 69.3 180 31.1
Nitab4.5_0002043g0040 Nicotiana tabacum HOM05D010709 ORTHO05D010376 9.6e-10 67.8 94 47.9
Nitab4.5_0006308g0030 Nicotiana tabacum HOM05D010709 ORTHO05D010376 2.1e-09 66.6 94 47.9
CSS0041982 Camellia sinensis var. sinensis HOM05D010709 ORTHO05D010376 2.8e-09 66.2 95 37.9
Manes.18G136300 Manihot esculenta HOM05D011591 ORTHO05D010376 2.8e-09 66.2 117 35.9
CAN.G1095.13 Capsicum annuum HOM05D010709 ORTHO05D010376 4.8e-09 65.5 189 31.2
Gorai.009G112200 Gossypium raimondii HOM05D020455 ORTHO05D010376 8.1e-09 64.7 125 31.2
Actinidia32624 Actinidia chinensis HOM05D010709 ORTHO05D010376 1.1e-08 64.3 119 35.3
Potri.009G075000 Populus trichocarpa HOM05D020455 ORTHO05D010376 1.1e-08 64.3 99 32.3
Sabra09G0056900 Salix brachista HOM05D011591 ORTHO05D010376 1.4e-08 63.9 99 34.3
Gohir.D05G108050 Gossypium hirsutum HOM05D020455 ORTHO05D010376 1.8e-08 63.5 143 31.5
Haze_24379 Corylus avellana HOM05D028161 ORTHO05D010376 2.4e-08 63.2 98 37.8
Cfa011740 Carpinus fangiana HOM05D028161 ORTHO05D010376 4.0e-08 62.4 98 38.8
arahy.Tifrunner.gnm1.ann1.EA8GWL Arachis hypogaea HOM05D020455 ORTHO05D010376 9.0e-08 61.2 128 35.9
Sed0000970 Sechium edule HOM05D011591 ORTHO05D010376 2.6e-07 59.7 129 30.2
arahy.Tifrunner.gnm1.ann1.NC1Z37 Arachis hypogaea HOM05D000516 ORTHO05D010376 4.5e-07 58.9 128 35.2
Ca_14980_v3 Cicer arietinum L. HOM05D016525 ORTHO05D010376 7.6e-07 58.2 129 35.7
MELO3C020524.2 Cucumis melo HOM05D039867 ORTHO05D010376 7.6e-07 58.2 99 32.3
SHI19189 Sapria himalayana HOM05D011591 ORTHO05D010376 1.7e-06 57.0 95 36.8
TWI74G1424 Tripterygium wilfordii HOM05D002172 ORTHO05D010376 1.7e-06 57.0 108 33.3
Glyma.14G197200 Glycine max HOM05D012059 ORTHO05D013484 2.9e-06 56.2 92 38.0
Thecc.09G353600 Theobroma cacao HOM05D020455 ORTHO05D010376 2.9e-06 56.2 155 30.3
CDE04G1435 Ceratophyllum demersum HOM05D065581 ORTHO05D002167 3.8e-06 55.8 127 31.5
Potri.009G074900 Populus trichocarpa HOM05D010097 ORTHO05D011665 3.8e-06 55.8 116 29.3
QL01p039514 Quercus lobata HOM05D011591 ORTHO05D010376 8.4e-06 54.7 121 33.9


User provided reference genes

Program Settings