Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g007650 Solanum pennellii HOM05D000002 ORTHO05D004433 1.1e-74 283.1 135 100.0
Sopen09g027930 Solanum pennellii HOM05D000002 ORTHO05D004433 9.5e-50 200.3 135 71.9
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.6e-41 172.9 131 64.9
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.0e-40 168.3 131 64.9
Nn8g40101 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.5e-39 166.4 133 66.2
Nn1g09492 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.6e-39 165.6 131 61.8
Nn5g27722 Nelumbo nucifera HOM05D000002 ORTHO05D004433 7.6e-39 164.1 107 77.6
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.8e-38 161.8 122 63.9
Nn1g02545 Nelumbo nucifera HOM05D000002 ORTHO05D004433 5.4e-37 157.9 133 62.4
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 7.1e-37 157.5 131 55.7
Nn4g25779 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.5e-34 149.8 131 56.5
Glyma.01G070601 Glycine max HOM05D000002 ORTHO05D004433 3.1e-32 142.1 113 60.2
Nn1g03239 Nelumbo nucifera HOM05D000002 ORTHO05D004433 6.9e-32 141.0 132 57.6
Nn4g24889 Nelumbo nucifera HOM05D000002 ORTHO05D004433 8.4e-30 134.0 91 71.4
Nn3g20324 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.9e-29 132.9 104 63.5
Nn1g02075 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.7e-28 129.0 106 59.4
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-28 128.3 120 51.7
Cpa.g.sc11.103 Carica papaya HOM05D000002 ORTHO05D004433 6.0e-28 127.9 104 59.6
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-27 127.1 120 51.7
SHI05549 Sapria himalayana HOM05D000002 ORTHO05D004433 1.3e-27 126.7 120 50.8
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 6.6e-27 124.4 120 48.3
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 3.3e-26 122.1 120 49.2
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-26 122.1 127 47.2
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-26 121.7 120 48.3
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 7.3e-26 120.9 125 45.6
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 1.3e-25 120.2 120 49.2
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-25 118.6 120 45.0
Thecc.03G106900 Theobroma cacao HOM05D000002 ORTHO05D004433 3.6e-25 118.6 84 70.2
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-24 116.7 120 48.3
SHI10489 Sapria himalayana HOM05D000002 ORTHO05D004433 1.8e-24 116.3 106 52.8
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-24 115.5 120 45.8
Sopen03g008290 Solanum pennellii HOM05D000002 ORTHO05D004433 5.3e-24 114.8 96 64.6
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-24 114.0 127 43.3
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-23 113.6 127 41.7
Nn2g15808 Nelumbo nucifera HOM05D000006 ORTHO05D004433 2.0e-23 112.8 104 53.8
RcHm_v2.0_Chr3g0481931 Rosa chinensis HOM05D000002 ORTHO05D000001 2.0e-23 112.8 128 45.3
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.6e-23 112.5 124 41.9
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.6e-23 112.5 122 44.3
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.6e-23 112.5 120 45.8
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.6e-23 112.5 127 42.5
CAN.G350.7 Capsicum annuum HOM05D000002 ORTHO05D004433 3.4e-23 112.1 69 78.3
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-23 112.1 127 42.5
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-23 112.1 121 44.6
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 5.8e-23 111.3 127 41.7
Sopen03g027090 Solanum pennellii HOM05D000002 ORTHO05D002065 7.6e-23 110.9 121 46.3
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.9e-23 110.5 127 41.7
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 9.9e-23 110.5 120 45.0
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.3e-22 110.2 124 41.1
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-22 110.2 128 43.8
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.2e-22 109.4 124 41.1
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 3.8e-22 108.6 115 48.7
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 6.4e-22 107.8 119 42.0
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-22 107.8 127 40.9
SHI32919 Sapria himalayana HOM05D000002 ORTHO05D004433 6.4e-22 107.8 104 49.0
Sopen11g022370 Solanum pennellii HOM05D000036 ORTHO05D005472 6.4e-22 107.8 118 46.6
Nn5g30038 Nelumbo nucifera HOM05D000002 ORTHO05D004433 8.4e-22 107.5 135 45.2
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 1.1e-21 107.1 121 43.8
SHI45691 Sapria himalayana HOM05D000002 ORTHO05D004433 1.4e-21 106.7 106 49.1
Sopen09g028980 Solanum pennellii HOM05D000002 ORTHO05D004433 3.2e-21 105.5 121 42.1
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-20 103.6 114 43.0
Oeu035997.1 Olea europaea HOM05D000002 ORTHO05D004433 2.7e-20 102.4 104 49.0
SHI43060 Sapria himalayana HOM05D000002 ORTHO05D004433 4.6e-20 101.7 102 50.0
SHI32313 Sapria himalayana HOM05D000002 ORTHO05D004433 6.0e-20 101.3 99 49.5
Oeu034209.1 Olea europaea HOM05D000002 ORTHO05D004433 7.9e-20 100.9 104 47.1
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-20 100.9 104 49.0
BolC8t49584H Brassica oleracea HOM05D000002 ORTHO05D004433 1.3e-19 100.1 121 40.5
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-19 100.1 98 46.9
Oeu012846.1 Olea europaea HOM05D003971 ORTHO05D004433 2.3e-19 99.4 104 50.0
Ah.04g159010 Amaranthus hybridus HOM05D000002 ORTHO05D004433 3.0e-19 99.0 105 44.8
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 8.7e-19 97.4 120 40.8
Sopen09g011970 Solanum pennellii HOM05D008571 ORTHO05D011280 8.7e-19 97.4 120 42.5
Ah.03g145180 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.1e-18 97.1 110 41.8
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-18 97.1 114 43.0
Sopen00g007880 Solanum pennellii HOM05D000002 ORTHO05D004433 1.1e-18 97.1 116 41.4
Nn1g01470 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.9e-18 96.3 120 42.5
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 2.5e-18 95.9 120 44.2
Nn2g15606 Nelumbo nucifera HOM05D000006 ORTHO05D004433 3.3e-18 95.5 94 51.1
Oeu001115.1 Olea europaea HOM05D000002 ORTHO05D004433 7.4e-18 94.4 96 51.0
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 9.6e-18 94.0 97 48.5
Ah.16g106880 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.3e-17 93.6 110 40.0
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 1.6e-17 93.2 100 49.0
SHI12756 Sapria himalayana HOM05D000002 ORTHO05D004433 2.8e-17 92.4 119 43.7
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.1e-17 90.9 103 38.8
CiPaw.08G098800 Carya illinoinensis HOM05D000002 ORTHO05D004433 1.1e-16 90.5 120 39.2
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-16 89.7 102 42.2
MD14G1034300 Malus domestica HOM05D000038 ORTHO05D004433 1.8e-16 89.7 93 46.2
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 1.8e-16 89.7 119 42.0
Oeu022773.1 Olea europaea HOM05D000002 ORTHO05D004433 1.2e-15 87.0 104 44.2
Oeu055579.1 Olea europaea HOM05D000002 ORTHO05D004433 1.5e-15 86.7 104 44.2
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 2.0e-15 86.3 119 42.0
Oeu003015.1 Olea europaea HOM05D000002 ORTHO05D004433 3.4e-15 85.5 95 43.2
Dinv02026 Davidia involucrata HOM05D028709 ORTHO05D004433 5.8e-15 84.7 109 33.9
MD01G1222200 Malus domestica HOM05D000002 ORTHO05D004433 5.8e-15 84.7 126 35.7
Cc05_g05430 Coffea canephora HOM05D000002 ORTHO05D004433 7.6e-15 84.3 105 40.0
SHI18425 Sapria himalayana HOM05D000002 ORTHO05D004433 1.3e-14 83.6 81 48.1
SHI10029 Sapria himalayana HOM05D000002 ORTHO05D004433 1.7e-14 83.2 81 46.9
Gohir.D08G274150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 2.9e-14 82.4 107 40.2
Gorai.004G292700 Gossypium raimondii HOM05D000002 ORTHO05D004433 2.9e-14 82.4 107 40.2
Oeu050054.1 Olea europaea HOM05D000002 ORTHO05D004433 3.8e-14 82.0 104 42.3
SHI00406 Sapria himalayana HOM05D000002 ORTHO05D004433 6.4e-14 81.3 81 45.7
Nn1g06847 Nelumbo nucifera HOM05D000002 ORTHO05D004433 8.4e-14 80.9 99 38.4
Prupe.7G032100 Prunus persica HOM05D000002 ORTHO05D004433 4.2e-13 78.6 80 43.8
PGR044G0355 Punica granatum HOM05D000097 ORTHO05D000041 9.3e-13 77.4 115 39.1
PGR044G1025 Punica granatum HOM05D000097 ORTHO05D000041 2.1e-12 76.3 107 42.1
Gohir.D10G094150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 3.5e-12 75.5 89 44.9
ECA233G2147 Erigeron canadensis HOM05D000509 ORTHO05D004433 6.0e-12 74.7 88 42.0
Glyma.07G117100 Glycine max HOM05D000002 ORTHO05D004433 1.0e-11 73.9 84 38.1
Sopen02g016810 Solanum pennellii HOM05D008571 ORTHO05D004433 1.0e-11 73.9 99 40.4
Ciclev10010619m.g Citrus clementina HOM05D007908 ORTHO05D009653 5.1e-11 71.6 115 34.8
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 6.7e-11 71.2 83 39.8
Nn2g13681 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.1e-10 70.5 85 38.8
PGR044G1153 Punica granatum HOM05D000097 ORTHO05D000041 1.1e-10 70.5 110 37.3
Sopen11g022850 Solanum pennellii HOM05D000002 ORTHO05D004433 1.1e-10 70.5 97 34.0
PGR044G1072 Punica granatum HOM05D000097 ORTHO05D000041 2.5e-10 69.3 110 37.3
HanXRQChr15g0467201 Helianthus annuus HOM05D000002 ORTHO05D000001 3.3e-10 68.9 134 32.1
PGSC0003DMG400023646 Solanum tuberosum HOM05D000002 ORTHO05D004433 5.6e-10 68.2 81 44.4
Nn5g30039 Nelumbo nucifera HOM05D000002 ORTHO05D004433 9.6e-10 67.4 102 40.2
Oeu033717.1 Olea europaea HOM05D000002 ORTHO05D004433 1.3e-09 67.0 72 44.4
TAR237G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.3e-09 67.0 119 29.4
Nn4g25076 Nelumbo nucifera HOM05D000414 ORTHO05D009653 1.6e-09 66.6 117 30.8
SHI22389 Sapria himalayana HOM05D000002 ORTHO05D004433 4.8e-09 65.1 102 40.2
FvH4_1g02950 Fragaria vesca HOM05D000097 ORTHO05D000041 6.2e-09 64.7 98 37.8
FAN28G0864 Fragaria x ananassa HOM05D000097 ORTHO05D000041 6.2e-09 64.7 98 37.8
Dinv02177 Davidia involucrata HOM05D000002 ORTHO05D004433 1.1e-08 63.9 68 42.6
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.4e-08 63.5 119 32.8
Sopen05g013900 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-08 63.5 62 43.5
Prupe.2G033500 Prunus persica HOM05D000002 ORTHO05D004433 2.4e-08 62.8 95 34.7
TWI15G0389 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 3.1e-08 62.4 117 29.1
TWI73G0060 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 3.1e-08 62.4 117 29.1
TWI77G1008 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 3.1e-08 62.4 117 29.1
TWI15G0201 Tripterygium wilfordii HOM05D000097 ORTHO05D000041 5.3e-08 61.6 88 33.0
CSS0046925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.2e-07 60.5 68 44.1
Sopen12g018200 Solanum pennellii HOM05D000014 ORTHO05D004433 1.2e-07 60.5 62 45.2
ATR0049G043 Amborella trichopoda HOM05D000097 ORTHO05D000041 1.5e-07 60.1 83 33.7
ECA247G1586 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-07 60.1 53 50.9
Rhsim06G0128500 Rhododendron simsii HOM05D007908 ORTHO05D009653 1.5e-07 60.1 117 28.2
Thhalv10019725m.g Eutrema salsugineum HOM05D000002 ORTHO05D004433 2.0e-07 59.7 65 49.2
SEGI_27317 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.0e-07 59.7 117 28.2
Hma1.2p1_0303F.1_g118800 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 2.6e-07 59.3 117 28.2
Nn7g36623 Nelumbo nucifera HOM05D000793 ORTHO05D001191 2.6e-07 59.3 112 31.2
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 2.6e-07 59.3 62 41.9
Sopen10g024020 Solanum pennellii HOM05D008571 ORTHO05D011280 2.6e-07 59.3 95 37.9
SHI00503 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-07 58.9 119 26.9
Nn8g39618 Nelumbo nucifera HOM05D000002 ORTHO05D004433 4.5e-07 58.5 72 41.7
Sopen05g027370 Solanum pennellii HOM05D000002 ORTHO05D004433 4.5e-07 58.5 50 52.0
Rhsim05G0128700 Rhododendron simsii HOM05D007908 ORTHO05D009653 5.8e-07 58.2 117 28.2
SHI47496 Sapria himalayana HOM05D000002 ORTHO05D004433 7.6e-07 57.8 45 53.3
vmacro12855 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 7.6e-07 57.8 85 32.9
QL05p063530 Quercus lobata HOM05D000002 ORTHO05D004433 1.0e-06 57.4 72 38.9
RcHm_v2.0_Chr7g0230661 Rosa chinensis HOM05D000097 ORTHO05D000041 1.3e-06 57.0 104 30.8
SHI50350 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 57.0 105 32.4
SHI50384 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 57.0 105 32.4
THA.LOC104810237 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.3e-06 57.0 135 28.1
PGR044G2298 Punica granatum HOM05D000002 ORTHO05D000047 1.7e-06 56.6 118 28.0
SHI17056 Sapria himalayana HOM05D000105 ORTHO05D004433 1.7e-06 56.6 60 43.3
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-06 56.2 99 31.3
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 2.9e-06 55.8 121 29.8
GSVIVG01011219001 Vitis vinifera HOM05D000097 ORTHO05D000041 2.9e-06 55.8 88 30.7
Actinidia09829 Actinidia chinensis HOM05D000097 ORTHO05D000041 3.8e-06 55.5 85 35.3
Nn5g28276 Nelumbo nucifera HOM05D000097 ORTHO05D000041 3.8e-06 55.5 85 31.8
SHI39435 Sapria himalayana HOM05D000002 ORTHO05D004433 3.8e-06 55.5 39 56.4
SHI39437 Sapria himalayana HOM05D000002 ORTHO05D004433 3.8e-06 55.5 39 56.4
SHI09919 Sapria himalayana HOM05D000002 ORTHO05D004433 4.9e-06 55.1 50 52.0
CAN.G756.24 Capsicum annuum HOM05D002442 ORTHO05D002670 6.5e-06 54.7 121 32.2
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 6.5e-06 54.7 121 29.8
SHI15830 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-06 54.7 119 26.1
SHI01914 Sapria himalayana HOM05D000002 ORTHO05D000047 8.4e-06 54.3 116 27.6
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 8.4e-06 54.3 121 28.9
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 8.4e-06 54.3 121 28.9
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 8.4e-06 54.3 121 28.9


User provided reference genes

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