Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g043720.4 Solanum lycopersicum HOM05D007087 ORTHO05D008968 2.8e-31 138.3 86 100.0
Sopen03g007570 Solanum pennellii HOM05D007087 ORTHO05D008968 2.8e-31 138.3 86 100.0
PGSC0003DMG400016688 Solanum tuberosum HOM05D007087 ORTHO05D008968 2.8e-31 138.3 86 100.0
CAN.G11.24 Capsicum annuum HOM05D007087 ORTHO05D008968 6.3e-31 137.1 86 91.9
Nitab4.5_0000465g0110 Nicotiana tabacum HOM05D007087 ORTHO05D008968 3.1e-30 134.8 86 97.7
Peaxi162Scf00118g00061 Petunia axillaris HOM05D007087 ORTHO05D008968 3.1e-30 134.8 86 96.5
Eucgr.I00598 Eucalyptus grandis HOM05D007087 ORTHO05D008968 4.5e-29 131.0 86 79.1
Eucgr.I00599 Eucalyptus grandis HOM05D007087 ORTHO05D008968 4.5e-29 131.0 86 79.1
CSS0037594 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 1.0e-28 129.8 86 77.9
CSS0044951 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 1.0e-28 129.8 86 77.9
Cc07_g07910 Coffea canephora HOM05D007087 ORTHO05D008968 1.3e-28 129.4 83 96.4
PGR102G1803 Punica granatum HOM05D007087 ORTHO05D008968 1.3e-28 129.4 86 77.9
ECA232G4432 Erigeron canadensis HOM05D007087 ORTHO05D008968 1.7e-28 129.0 86 79.1
HanXRQChr09g0262861 Helianthus annuus HOM05D007087 ORTHO05D008968 1.7e-28 129.0 86 79.1
HanXRQChr11g0324431 Helianthus annuus HOM05D007087 ORTHO05D008968 1.7e-28 129.0 86 79.1
Actinidia16395 Actinidia chinensis HOM05D007087 ORTHO05D008968 2.2e-28 128.6 86 76.7
Dinv27003 Davidia involucrata HOM05D007087 ORTHO05D008968 2.2e-28 128.6 86 76.7
Cfa006833 Carpinus fangiana HOM05D007087 ORTHO05D008968 2.9e-28 128.3 83 79.5
Hma1.2p1_0080F.1_g042080 Hydrangea macrophylla HOM05D007087 ORTHO05D008968 2.9e-28 128.3 83 79.5
Actinidia22784 Actinidia chinensis HOM05D007087 ORTHO05D008968 3.8e-28 127.9 86 76.7
Lsat_1_v5_gn_4_156341 Lactuca sativa HOM05D007087 ORTHO05D008968 5.0e-28 127.5 86 77.9
Oeu024989.2 Olea europaea HOM05D007087 ORTHO05D008968 5.0e-28 127.5 86 76.7
FvH4_1g19040 Fragaria vesca HOM05D007087 ORTHO05D008968 8.5e-28 126.7 83 78.3
FAN23G1122 Fragaria x ananassa HOM05D007087 ORTHO05D008968 8.5e-28 126.7 83 78.3
FAN26G0060 Fragaria x ananassa HOM05D007087 ORTHO05D008968 8.5e-28 126.7 83 78.3
FAN28G2302 Fragaria x ananassa HOM05D007087 ORTHO05D008968 8.5e-28 126.7 83 78.3
MD01G1044400 Malus domestica HOM05D007087 ORTHO05D008968 8.5e-28 126.7 83 78.3
Prupe.6G209300 Prunus persica HOM05D007087 ORTHO05D008968 8.5e-28 126.7 83 78.3
QL06p037367 Quercus lobata HOM05D007087 ORTHO05D008968 8.5e-28 126.7 83 78.3
RcHm_v2.0_Chr2g0110041 Rosa chinensis HOM05D007087 ORTHO05D008968 8.5e-28 126.7 83 78.3
THA.LOC104807661 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 8.5e-28 126.7 86 75.6
COL.COLO4_11683 Corchorus olitorius HOM05D007087 ORTHO05D008968 1.1e-27 126.3 86 75.6
Sc16g0000740 Simmondsia chinensis HOM05D007087 ORTHO05D008968 1.1e-27 126.3 83 77.1
AL4G12190 Arabidopsis lyrata HOM05D007087 ORTHO05D008968 1.5e-27 125.9 83 77.1
AT2G22640 Arabidopsis thaliana HOM05D007087 ORTHO05D008968 1.5e-27 125.9 83 77.1
BcaB06g27810 Brassica carinata HOM05D007087 ORTHO05D008968 1.5e-27 125.9 83 77.1
Carub.0004s0180 Capsella rubella HOM05D007087 ORTHO05D008968 1.5e-27 125.9 83 77.1
Thhalv10000402m.g Eutrema salsugineum HOM05D007087 ORTHO05D008968 1.5e-27 125.9 83 77.1
vmacro18037 Vaccinium macrocarpon HOM05D007087 ORTHO05D008968 1.5e-27 125.9 86 75.6
THA.LOC104824923 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 1.9e-27 125.6 86 74.4
arahy.Tifrunner.gnm1.ann1.6G1T2R Arachis hypogaea HOM05D007087 ORTHO05D008968 2.5e-27 125.2 83 77.1
arahy.Tifrunner.gnm1.ann1.NU08EI Arachis hypogaea HOM05D007087 ORTHO05D008968 2.5e-27 125.2 83 77.1
Gohir.A11G208700 Gossypium hirsutum HOM05D007087 ORTHO05D008968 2.5e-27 125.2 86 74.4
Gohir.D11G214800 Gossypium hirsutum HOM05D007087 ORTHO05D008968 2.5e-27 125.2 86 74.4
Lalb_Chr09g0325791 Lupinus albus HOM05D007087 ORTHO05D008968 2.5e-27 125.2 83 77.1
Ca_13466_v3 Cicer arietinum L. HOM05D007087 ORTHO05D008968 3.2e-27 124.8 83 77.1
Glyma.01G020200 Glycine max HOM05D007087 ORTHO05D008968 3.2e-27 124.8 83 77.1
Gorai.007G230500 Gossypium raimondii HOM05D007087 ORTHO05D008968 3.2e-27 124.8 84 75.0
Lj2g0010143 Lotus japonicus HOM05D007087 ORTHO05D008968 3.2e-27 124.8 83 77.1
MBI16_g36494_MAGBIO Magnolia biondii HOM05D007087 ORTHO05D008968 3.2e-27 124.8 84 75.0
Medtr5g030935 Medicago truncatula HOM05D007087 ORTHO05D008968 3.2e-27 124.8 83 77.1
Phvul.002G143500 Phaseolus vulgaris HOM05D007087 ORTHO05D008968 3.2e-27 124.8 83 77.1
Psat2g134040 Pisum sativum HOM05D007087 ORTHO05D008968 3.2e-27 124.8 83 77.1
TPR.G37071 Trifolium pratense HOM05D007087 ORTHO05D008968 3.2e-27 124.8 83 77.1
TAR376G1208 Trochodendron aralioides HOM05D007087 ORTHO05D008968 3.2e-27 124.8 83 75.9
Manes.12G121500 Manihot esculenta HOM05D007087 ORTHO05D008968 4.2e-27 124.4 86 74.4
Atru.chr3.1157 Acer truncatum HOM05D007087 ORTHO05D008968 5.5e-27 124.0 86 74.4
Atru.chr3.1173 Acer truncatum HOM05D007087 ORTHO05D008968 5.5e-27 124.0 86 74.4
Ciclev10027006m.g Citrus clementina HOM05D007087 ORTHO05D008968 5.5e-27 124.0 86 75.6
Duzib264G0202 Durio zibethinus HOM05D007087 ORTHO05D008968 5.5e-27 124.0 83 75.9
Lalb_Chr05g0216201 Lupinus albus HOM05D007087 ORTHO05D008968 5.5e-27 124.0 83 75.9
TWI77G0839 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 5.5e-27 124.0 83 75.9
Duzib147G0219 Durio zibethinus HOM05D007087 ORTHO05D008968 7.2e-27 123.6 85 72.9
MELO3C007697.2 Cucumis melo HOM05D007087 ORTHO05D008968 9.4e-27 123.2 86 74.4
EL10Ac6g13306 Beta vulgaris HOM05D007087 ORTHO05D008968 1.2e-26 122.9 83 73.5
CiPaw.08G145100 Carya illinoinensis HOM05D007087 ORTHO05D008968 1.2e-26 122.9 83 74.7
Glyma.09G202200 Glycine max HOM05D007087 ORTHO05D008968 1.2e-26 122.9 83 75.9
AUR62005889 Chenopodium quinoa HOM05D007087 ORTHO05D008968 1.6e-26 122.5 83 73.5
Thecc.01G084300 Theobroma cacao HOM05D007087 ORTHO05D008968 1.6e-26 122.5 86 73.3
CiPaw.07G042900 Carya illinoinensis HOM05D007087 ORTHO05D008968 2.1e-26 122.1 83 75.9
Migut.L00449 Erythranthe guttata HOM05D007087 ORTHO05D008968 2.1e-26 122.1 83 74.7
TWI53G1267 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 2.1e-26 122.1 83 75.9
BcaC02g08628 Brassica carinata HOM05D007087 ORTHO05D008968 3.6e-26 121.3 84 76.2
A04p17120 Brassica napus HOM05D007087 ORTHO05D008968 3.6e-26 121.3 84 76.2
C04p51930 Brassica napus HOM05D007087 ORTHO05D008968 3.6e-26 121.3 84 76.2
BolC4t26765H Brassica oleracea HOM05D007087 ORTHO05D008968 3.6e-26 121.3 84 76.2
BraA04t17341Z Brassica rapa HOM05D007087 ORTHO05D008968 3.6e-26 121.3 84 76.2
Cpa.g.sc129.16 Carica papaya HOM05D007087 ORTHO05D008968 4.7e-26 120.9 83 74.7
Aqoxy5G01405 Aquilegia oxysepala HOM05D007087 ORTHO05D008968 6.1e-26 120.6 88 71.6
Hund16615 Selenicereus undatus HOM05D007087 ORTHO05D008968 1.0e-25 119.8 79 75.9
TAR625G1164 Trochodendron aralioides HOM05D007087 ORTHO05D008968 1.0e-25 119.8 83 72.3
Sed0015245 Sechium edule HOM05D007087 ORTHO05D008968 5.2e-25 117.5 86 83.7
Potri.014G010000 Populus trichocarpa HOM05D007087 ORTHO05D008968 3.3e-24 114.8 90 66.7
PSO017G4672 Papaver somniferum HOM05D007087 ORTHO05D008968 9.7e-24 113.2 85 69.4
PSO478G0358 Papaver somniferum HOM05D007087 ORTHO05D008968 9.7e-24 113.2 85 69.4
Zm00001eb259430 Zea mays HOM05D007087 ORTHO05D008968 1.7e-23 112.5 84 66.7
Os02g0829900 Oryza sativa ssp. japonica HOM05D007087 ORTHO05D008968 2.2e-23 112.1 86 76.7
CDE01G0651 Ceratophyllum demersum HOM05D007087 ORTHO05D008968 3.7e-23 111.3 84 64.3
A09p57350 Brassica napus HOM05D007087 ORTHO05D008968 2.4e-22 108.6 82 70.7
BraA09t41128Z Brassica rapa HOM05D007087 ORTHO05D008968 2.4e-22 108.6 82 70.7
Dinv36975 Davidia involucrata HOM05D007087 ORTHO05D008968 3.1e-22 108.2 73 79.5
CsaV3_6G044750 Cucumis sativus L. HOM05D007087 ORTHO05D008968 5.3e-22 107.5 72 76.4
Sp4g01675 Schrenkiella parvula HOM05D007087 ORTHO05D008968 1.2e-21 106.3 72 75.0
Nitab4.5_0008656g0010 Nicotiana tabacum HOM05D007087 ORTHO05D008968 1.6e-21 105.9 86 84.9
ATR0800G005 Amborella trichopoda HOM05D007087 ORTHO05D008968 4.5e-21 104.4 78 69.2
Sabra14G0004400 Salix brachista HOM05D007087 ORTHO05D008968 2.2e-20 102.1 71 69.0
Sabra14G0001400 Salix brachista HOM05D007087 ORTHO05D008968 8.5e-20 100.1 73 67.1
ClCG01G018190 Citrullus lanatus HOM05D007087 ORTHO05D008968 1.1e-19 99.8 73 72.6
COL.COLO4_02760 Corchorus olitorius HOM05D007087 ORTHO05D008968 5.5e-19 97.4 83 65.1
BcaB08g35111 Brassica carinata HOM05D007087 ORTHO05D008968 1.6e-18 95.9 90 58.9
Nn5g29785 Nelumbo nucifera HOM05D007087 ORTHO05D008968 5.7e-16 87.4 44 95.5
Aa31LG7G14170 Aethionema arabicum HOM05D007087 ORTHO05D008968 3.7e-15 84.7 44 90.9
Pp3c8_2740 Physcomitrium patens HOM05D007087 ORTHO05D008968 1.8e-14 82.4 71 57.7
AagrBONN_evm.TU.Sc2ySwM_344.2813 Anthoceros agrestis HOM05D007087 ORTHO05D008968 5.4e-14 80.9 76 50.0
Mapoly0132s0041 Marchantia polymorpha HOM05D007087 ORTHO05D008968 5.4e-14 80.9 72 55.6
unitig_32.g10648 Utricularia gibba HOM05D007087 ORTHO05D008968 3.5e-13 78.2 46 78.3
Actinidia36375 Actinidia chinensis HOM05D007087 ORTHO05D008968 4.5e-13 77.8 44 84.1
SMO144G0170 Selaginella moellendorffii HOM05D007087 ORTHO05D008968 2.5e-11 72.0 69 49.3
FAN19G2569 Fragaria x ananassa HOM05D007087 ORTHO05D008968 2.8e-07 58.5 48 62.5
Nitab4.5_0000465g0080 Nicotiana tabacum HOM05D007087 ORTHO05D008968 4.9e-07 57.8 36 77.8


User provided reference genes

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