Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 4.7e-165 585.1 463 100.0
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 7.1e-153 544.7 465 90.8
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 2.4e-145 519.6 393 92.9
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 2.4e-124 449.9 398 85.4
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 3.0e-119 433.0 396 82.8
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 2.1e-96 357.1 390 70.3
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 6.1e-96 355.5 390 67.9
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 1.0e-95 354.8 400 67.8
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 1.0e-95 354.8 397 70.5
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 1.1e-94 351.3 396 67.9
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 1.1e-94 351.3 394 73.9
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 4.4e-94 349.4 395 73.7
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 5.7e-94 349.0 387 71.6
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 6.3e-93 345.5 396 67.9
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 8.2e-93 345.1 395 73.2
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.1e-92 344.7 390 70.3
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 4.1e-92 342.8 391 68.5
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 5.3e-92 342.4 392 70.4
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 6.9e-92 342.0 392 69.4
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 1.2e-91 341.3 397 71.8
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 3.4e-91 339.7 364 72.3
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 3.4e-91 339.7 394 68.5
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 5.9e-91 339.0 399 67.2
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 5.9e-91 339.0 395 69.4
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 2.2e-90 337.0 392 70.2
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 2.9e-90 336.7 392 67.3
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 6.5e-90 335.5 395 63.5
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 8.5e-90 335.1 398 72.4
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 5.5e-89 332.4 397 71.5
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 2.7e-88 330.1 396 72.7
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 3.6e-88 329.7 400 67.0
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 3.6e-88 329.7 399 74.2
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 3.6e-88 329.7 405 67.4
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 4.7e-88 329.3 394 68.0
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 1.8e-87 327.4 395 58.5
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 5.2e-87 325.9 247 74.9
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 8.8e-87 325.1 390 69.7
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 8.8e-87 325.1 390 66.2
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 8.8e-87 325.1 401 57.6
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 2.6e-86 323.6 401 69.1
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 3.3e-86 323.2 369 71.5
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 3.3e-86 323.2 393 57.0
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 3.3e-86 323.2 414 67.4
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 7.4e-86 322.0 243 73.3
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 7.4e-86 322.0 243 73.3
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 1.7e-85 320.9 395 72.9
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 2.2e-85 320.5 409 65.0
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 8.2e-85 318.5 392 62.2
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 1.4e-84 317.8 261 67.0
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 4.1e-84 316.2 396 69.9
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 9.1e-84 315.1 401 68.8
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 1.2e-83 314.7 396 66.2
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 5.0e-82 309.3 401 66.3
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 5.0e-82 309.3 338 69.8
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 6.5e-82 308.9 397 66.2
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 8.5e-82 308.5 249 71.1
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 1.5e-81 307.8 209 78.9
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 2.5e-81 307.0 396 63.6
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 5.5e-81 305.8 345 64.1
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 7.2e-81 305.4 249 71.1
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 1.2e-80 304.7 408 64.7
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 1.2e-80 304.7 391 70.8
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 2.7e-80 303.5 389 68.1
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 3.6e-80 303.1 400 65.0
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 4.7e-80 302.8 399 67.7
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 4.7e-80 302.8 399 67.4
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 4.7e-80 302.8 368 71.5
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 4.0e-79 299.7 399 60.7
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 8.8e-79 298.5 390 64.6
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 1.2e-78 298.1 251 69.7
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 1.2e-78 298.1 404 52.0
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 1.5e-78 297.7 336 70.8
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 3.3e-78 296.6 391 61.4
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 3.3e-78 296.6 406 66.3
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 4.4e-78 296.2 358 67.0
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 1.3e-77 294.7 387 64.1
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 4.8e-77 292.7 399 56.1
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 9.1e-76 288.5 400 62.8
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 3.8e-74 283.1 260 66.2
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 5.0e-74 282.7 259 66.0
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 4.2e-73 279.6 397 66.5
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 1.2e-72 278.1 209 74.6
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 1.2e-72 278.1 424 58.7
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 1.4e-71 274.6 216 73.1
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 1.8e-68 264.2 165 77.6
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 2.4e-68 263.8 166 77.7
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 7.0e-68 262.3 230 61.7
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 5.5e-65 252.7 263 62.0
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 1.8e-63 247.7 219 66.2
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 4.0e-63 246.5 160 74.4
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 3.4e-62 243.4 218 65.6
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.3e-61 241.5 147 79.6
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 2.2e-61 240.7 214 63.6
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 1.1e-60 238.4 165 72.1
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 1.1e-60 238.4 165 72.1
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 1.1e-60 238.4 165 72.1
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 1.1e-60 238.4 165 72.1
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 5.4e-60 236.1 165 71.5
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.6e-59 234.6 168 70.8
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 2.8e-56 223.8 165 67.3
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 6.8e-55 219.2 251 52.6
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 2.6e-54 217.2 164 64.6
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 2.3e-50 204.1 351 63.5
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 8.6e-50 202.2 167 62.3
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 8.6e-50 202.2 167 62.3
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.9e-49 201.1 163 62.0
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.9e-49 201.1 163 62.0
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 6.4e-37 159.5 152 56.6
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 4.3e-33 146.7 225 46.2
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 2.2e-29 134.4 168 46.4
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 2.1e-27 127.9 184 47.8
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 7.6e-22 109.4 164 40.2
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 7.8e-19 99.4 63 77.8
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 1.1e-15 89.0 139 36.7
Nitab4.5_0001038g0160 Nicotiana tabacum HOM05D006571 ORTHO05D007771 5.8e-14 83.2 150 78.7
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 1.1e-12 79.0 117 41.9
TAR628G0345 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.6e-11 75.1 183 64.5
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 1.1e-09 68.9 95 44.2
HPP92_023605 Vanilla planifolia HOM05D006571 ORTHO05D007771 5.3e-07 60.1 113 50.4
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 1.5e-06 58.5 115 34.8
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 2.0e-06 58.2 82 40.2
CARHR009720 Cardamine hirsuta HOM05D005498 ORTHO05D006719 9.9e-06 55.8 113 32.7


User provided reference genes

Program Settings