Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 7.4e-41 170.6 123 100.0
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 7.4e-41 170.6 123 100.0
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 1.2e-35 153.3 122 95.9
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 1.3e-34 149.8 122 90.2
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 7.4e-33 144.1 122 89.3
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 2.1e-32 142.5 114 93.9
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 2.1e-32 142.5 115 93.0
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 6.2e-32 141.0 116 90.5
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 1.4e-31 139.8 115 90.4
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 2.4e-31 139.0 115 92.2
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 3.1e-31 138.7 114 90.4
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 4.0e-31 138.3 115 89.6
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 4.0e-31 138.3 122 85.2
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 5.3e-31 137.9 115 90.4
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 5.3e-31 137.9 115 90.4
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 5.3e-31 137.9 115 90.4
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 6.9e-31 137.5 122 85.2
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 9.0e-31 137.1 115 89.6
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 9.0e-31 137.1 115 88.7
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 1.2e-30 136.7 127 83.5
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 1.2e-30 136.7 114 90.4
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 2.0e-30 136.0 115 89.6
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 2.0e-30 136.0 114 88.6
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 2.0e-30 136.0 114 88.6
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 3.4e-30 135.2 114 87.7
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 3.4e-30 135.2 114 87.7
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 4.5e-30 134.8 115 89.6
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 4.5e-30 134.8 115 89.6
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 4.5e-30 134.8 115 89.6
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 4.5e-30 134.8 115 89.6
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 5.8e-30 134.4 114 90.4
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 5.8e-30 134.4 115 89.6
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 5.8e-30 134.4 115 89.6
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 5.8e-30 134.4 123 83.7
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 7.6e-30 134.0 122 84.4
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 7.6e-30 134.0 122 83.6
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 7.6e-30 134.0 122 83.6
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 7.6e-30 134.0 122 83.6
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 7.6e-30 134.0 114 88.6
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 1.0e-29 133.7 114 88.6
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 1.3e-29 133.3 114 87.7
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 1.7e-29 132.9 115 88.7
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 1.7e-29 132.9 122 85.2
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 2.2e-29 132.5 122 82.8
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 2.2e-29 132.5 122 82.8
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 2.2e-29 132.5 113 89.4
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 2.9e-29 132.1 122 83.6
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 3.8e-29 131.7 115 88.7
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 3.8e-29 131.7 115 87.8
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 3.8e-29 131.7 115 88.7
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 6.5e-29 131.0 115 88.7
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 6.5e-29 131.0 115 87.8
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 8.4e-29 130.6 119 84.0
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 8.4e-29 130.6 115 86.1
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 1.1e-28 130.2 114 86.0
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 1.1e-28 130.2 121 86.0
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 1.4e-28 129.8 115 86.1
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 1.4e-28 129.8 122 83.6
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 1.9e-28 129.4 115 86.1
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 1.9e-28 129.4 115 85.2
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 2.5e-28 129.0 114 87.7
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 3.2e-28 128.6 115 86.1
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 3.2e-28 128.6 115 86.1
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 3.2e-28 128.6 114 86.0
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 4.2e-28 128.3 116 86.2
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 4.2e-28 128.3 115 85.2
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 7.1e-28 127.5 116 72.4
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 7.1e-28 127.5 115 86.1
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 2.7e-27 125.6 115 84.3
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 2.7e-27 125.6 116 83.6
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 2.7e-27 125.6 116 83.6
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 3.5e-27 125.2 124 79.8
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 3.5e-27 125.2 110 84.5
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 3.0e-26 122.1 114 82.5
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 3.0e-26 122.1 113 85.0
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 3.9e-26 121.7 114 65.8
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 8.7e-26 120.6 121 77.7
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 1.5e-25 119.8 122 82.8
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 1.9e-25 119.4 115 81.7
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 2.5e-25 119.0 115 80.9
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 3.3e-25 118.6 119 79.0
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 4.3e-25 118.2 116 80.2
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 6.3e-24 114.4 120 64.2
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 8.2e-24 114.0 108 87.0
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 6.9e-23 110.9 113 76.1
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 2.0e-22 109.4 118 50.0
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 2.6e-22 109.0 113 77.9
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 7.6e-22 107.5 120 73.3
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 8.5e-21 104.0 101 86.1
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 3.6e-19 98.6 50 92.0
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 2.3e-18 95.9 58 77.6
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 2.3e-18 95.9 51 86.3
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 6.7e-18 94.4 119 71.4
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 1.1e-15 87.0 111 72.1
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 1.8e-15 86.3 115 70.4
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 3.1e-15 85.5 89 71.9
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 2.0e-14 82.8 114 67.5
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 2.6e-14 82.4 115 47.0
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 8.5e-13 77.4 100 42.0
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 2.0e-09 66.2 94 76.6
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 2.6e-09 65.9 48 62.5
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 2.6e-09 65.9 115 64.3
Atru.chr4.788 Acer truncatum HOM05D007518 ORTHO05D008168 2.6e-06 55.8 33 81.8


User provided reference genes

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