Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g006580 Solanum pennellii HOM05D033312 ORTHO05D006370 1.4e-117 426.4 226 100.0
Solyc03g033830.2 Solanum lycopersicum HOM05D033312 ORTHO05D006370 1.4e-114 416.4 225 98.2
PGSC0003DMG400045291 Solanum tuberosum HOM05D033312 ORTHO05D006370 1.0e-51 207.6 149 83.9
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 4.7e-25 119.0 232 32.3
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.7e-25 119.0 232 32.3
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.7e-25 119.0 232 32.3
Nitab4.5_0000317g0230 Nicotiana tabacum HOM05D008032 ORTHO05D007704 2.0e-23 113.6 100 46.0
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.3e-22 110.9 128 43.8
Solyc09g005450.1 Solanum lycopersicum HOM05D008032 ORTHO05D006370 1.7e-22 110.5 102 45.1
Sopen09g001430 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-22 110.5 102 45.1
Sopen12g012330 Solanum pennellii HOM05D008032 ORTHO05D006370 1.8e-21 107.1 100 45.0
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 6.1e-17 92.0 94 38.3
PGSC0003DMG400004492 Solanum tuberosum HOM05D008877 ORTHO05D006370 8.0e-17 91.7 137 32.1
PGSC0003DMG400038517 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.8e-14 83.2 93 41.9
PGSC0003DMG400043378 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.8e-14 83.2 93 41.9
PGSC0003DMG400014630 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.8e-14 82.4 96 37.5
Solyc04g049380.4 Solanum lycopersicum HOM05D000290 ORTHO05D007415 3.1e-13 79.7 93 36.6
PGSC0003DMG400008733 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.2e-12 77.8 96 37.5
PGSC0003DMG400037701 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.6e-12 77.4 119 32.8
PGSC0003DMG400021934 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.0e-12 77.0 120 29.2
PGSC0003DMG400025637 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.0e-12 77.0 86 37.2
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 2.7e-12 76.6 88 34.1
PGSC0003DMG400023816 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.5e-12 76.3 80 38.8
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 5.9e-12 75.5 97 36.1
Dinv04832 Davidia involucrata HOM05D012569 ORTHO05D006370 7.7e-12 75.1 86 32.6
PGSC0003DMG400047165 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.9e-11 73.2 95 35.8
PGSC0003DMG400014749 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.8e-11 72.8 70 41.4
PGSC0003DMG400005369 Solanum tuberosum HOM05D008877 ORTHO05D006370 8.5e-11 71.6 80 35.0
PGSC0003DMG400046683 Solanum tuberosum HOM05D008032 ORTHO05D006370 8.5e-11 71.6 65 43.1
PGSC0003DMG400041897 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.1e-10 71.2 105 30.5
GSVIVG01013566001 Vitis vinifera HOM05D001792 ORTHO05D001821 1.1e-10 71.2 126 28.6
GSVIVG01020820001 Vitis vinifera HOM05D001610 ORTHO05D006370 1.1e-10 71.2 123 26.8
Dinv08590 Davidia involucrata HOM05D010100 ORTHO05D006370 1.5e-10 70.9 96 33.3
Rhsim10G0065700 Rhododendron simsii HOM05D008877 ORTHO05D006370 1.5e-10 70.9 69 37.7
PGSC0003DMG400011942 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.5e-10 70.9 87 34.5
Actinidia10652 Actinidia chinensis HOM05D008877 ORTHO05D006370 2.5e-10 70.1 73 38.4
Dinv32194 Davidia involucrata HOM05D000121 ORTHO05D001726 4.2e-10 69.3 76 35.5
Dinv36988 Davidia involucrata HOM05D010100 ORTHO05D006370 1.2e-09 67.8 96 27.1
PGSC0003DMG400044383 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.2e-09 67.8 79 34.2
Solyc01g060160.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 1.6e-09 67.4 93 32.3
CAN.G530.3 Capsicum annuum HOM05D008032 ORTHO05D006370 6.1e-09 65.5 80 35.0
PGSC0003DMG401029166 Solanum tuberosum HOM05D008877 ORTHO05D006370 8.0e-09 65.1 90 28.9
Dinv10200 Davidia involucrata HOM05D008877 ORTHO05D006370 5.2e-08 62.4 73 31.5
Dinv38437 Davidia involucrata HOM05D008877 ORTHO05D006370 5.2e-08 62.4 73 31.5
Solyc06g036555.1 Solanum lycopersicum HOM05D000017 ORTHO05D006370 5.2e-08 62.4 64 35.9
Dinv10840 Davidia involucrata HOM05D012569 ORTHO05D006370 6.8e-08 62.0 62 33.9
Dinv09219 Davidia involucrata HOM05D010100 ORTHO05D006370 1.5e-07 60.8 77 33.8
PGSC0003DMG400023316 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.6e-07 60.1 97 28.9
Dinv09220 Davidia involucrata HOM05D008877 ORTHO05D006370 4.4e-07 59.3 97 25.8
MELO3C025478.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.7e-07 58.9 69 43.5
MELO3C031327.2 Cucumis melo HOM05D007588 ORTHO05D001339 7.5e-07 58.5 93 37.6
MELO3C004331.2 Cucumis melo HOM05D007588 ORTHO05D001339 9.8e-07 58.2 93 37.6
PGSC0003DMG400027492 Solanum tuberosum HOM05D008877 ORTHO05D006370 9.8e-07 58.2 57 33.3
MELO3C029873.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.7e-06 57.4 50 52.0
Peaxi162Scf01129g00001 Petunia axillaris HOM05D008032 ORTHO05D006370 1.7e-06 57.4 95 34.7
PGSC0003DMG400013120 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.8e-06 56.6 55 41.8
MELO3C014251.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.7e-06 56.2 84 35.7
Dinv07635 Davidia involucrata HOM05D003048 ORTHO05D003418 4.9e-06 55.8 68 35.3
Nn5g28355 Nelumbo nucifera HOM05D023818 ORTHO05D022948 4.9e-06 55.8 68 33.8
Sed0017106 Sechium edule HOM05D007588 ORTHO05D001339 4.9e-06 55.8 66 36.4
Dinv12055 Davidia involucrata HOM05D008877 ORTHO05D006370 6.3e-06 55.5 99 28.3


User provided reference genes

Program Settings