Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g004840 Solanum pennellii HOM05D006594 ORTHO05D008383 1.5e-259 899.0 459 100.0
Solyc03g026010.3 Solanum lycopersicum HOM05D006594 ORTHO05D008383 3.4e-256 887.9 459 98.5
PGSC0003DMG400014324 Solanum tuberosum HOM05D006594 ORTHO05D008383 1.7e-244 849.0 459 95.0
CAN.G856.1 Capsicum annuum HOM05D006594 ORTHO05D008383 3.4e-208 728.4 459 81.0
Peaxi162Scf00915g00007 Petunia axillaris HOM05D006594 ORTHO05D008383 1.5e-203 713.0 460 78.3
Cc02_g03190 Coffea canephora HOM05D006594 ORTHO05D008383 8.5e-151 537.7 460 60.0
CSS0002088 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 1.1e-150 537.3 461 60.1
CSS0024482 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 5.5e-150 535.0 461 59.9
Oeu022583.1 Olea europaea HOM05D006594 ORTHO05D008383 1.2e-147 527.3 456 57.5
Hma1.2p1_1323F.1_g275590 Hydrangea macrophylla HOM05D006594 ORTHO05D008383 2.6e-147 526.2 453 59.8
Lsat_1_v5_gn_0_29900 Lactuca sativa HOM05D006594 ORTHO05D008383 1.3e-143 513.8 455 56.3
SGA_v2.0_scaffold113G31757 Striga asiatica HOM05D006594 ORTHO05D008383 2.2e-138 496.5 456 56.1
MSTRG.8446 Avicennia marina HOM05D006594 ORTHO05D008383 3.7e-138 495.7 456 55.0
Migut.F01134 Erythranthe guttata HOM05D006594 ORTHO05D008383 1.2e-136 490.7 461 55.1
HanXRQChr09g0253731 Helianthus annuus HOM05D006594 ORTHO05D008383 3.5e-136 489.2 452 54.4
DCAR_009355 Daucus carota HOM05D006594 ORTHO05D008383 1.3e-135 487.3 456 54.6
Cfa008301 Carpinus fangiana HOM05D006594 ORTHO05D008383 2.5e-134 483.0 470 52.6
Duzib205G1849 Durio zibethinus HOM05D006594 ORTHO05D008383 7.3e-134 481.5 460 53.0
COL.COLO4_14285 Corchorus olitorius HOM05D006594 ORTHO05D008383 3.1e-132 476.1 459 52.5
SalBow2G3298 Salvia bowleyana HOM05D006594 ORTHO05D008383 1.2e-131 474.2 449 54.3
Ciclev10004900m.g Citrus clementina HOM05D006594 ORTHO05D008383 3.7e-130 469.2 463 51.6
Dinv28461 Davidia involucrata HOM05D006594 ORTHO05D008383 5.4e-129 465.3 412 57.3
Sc19g0001600 Simmondsia chinensis HOM05D006594 ORTHO05D008383 9.2e-129 464.5 468 51.9
Manes.14G027600 Manihot esculenta HOM05D006594 ORTHO05D008383 8.6e-127 458.0 467 51.6
QL09p014600 Quercus lobata HOM05D006594 ORTHO05D008383 8.6e-127 458.0 463 51.8
CiPaw.03G104400 Carya illinoinensis HOM05D006594 ORTHO05D008383 1.9e-126 456.8 470 51.9
TWI23G0502 Tripterygium wilfordii HOM05D006594 ORTHO05D008383 1.7e-122 443.7 470 49.8
Rhsim03G0179000 Rhododendron simsii HOM05D006594 ORTHO05D008383 6.4e-122 441.8 402 58.7
PGR142G0281 Punica granatum HOM05D006594 ORTHO05D008383 4.1e-121 439.1 457 50.8
Actinidia32874 Actinidia chinensis HOM05D006594 ORTHO05D008383 1.6e-120 437.2 408 56.1
Prupe.2G292200 Prunus persica HOM05D006594 ORTHO05D008383 2.3e-119 433.3 458 50.2
Aqoxy7G00398 Aquilegia oxysepala HOM05D006594 ORTHO05D008383 3.9e-119 432.6 450 51.8
MD07G1266600 Malus domestica HOM05D006594 ORTHO05D008383 5.1e-119 432.2 465 49.7
Gorai.008G279100 Gossypium raimondii HOM05D006594 ORTHO05D008383 8.6e-119 431.4 463 49.2
Gohir.D12G260500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.1e-118 431.0 465 49.0
Eucgr.K00239 Eucalyptus grandis HOM05D006594 ORTHO05D008383 9.5e-118 427.9 479 48.2
CsaV3_3G016960 Cucumis sativus L. HOM05D006594 ORTHO05D008383 2.1e-117 426.8 474 47.7
Potri.015G140900 Populus trichocarpa HOM05D006594 ORTHO05D008383 2.1e-117 426.8 464 48.1
vmacro06700 Vaccinium macrocarpon HOM05D006594 ORTHO05D008383 2.8e-117 426.4 411 56.0
PSO782G0556 Papaver somniferum HOM05D006594 ORTHO05D008383 8.1e-117 424.9 476 49.4
Sabra15G0151500 Salix brachista HOM05D006594 ORTHO05D008383 3.1e-116 422.9 460 47.2
ClCG05G007930 Citrullus lanatus HOM05D006594 ORTHO05D008383 5.2e-116 422.2 462 47.8
RcHm_v2.0_Chr1g0376971 Rosa chinensis HOM05D006594 ORTHO05D008383 3.4e-115 419.5 457 49.5
MELO3C006892.2 Cucumis melo HOM05D006594 ORTHO05D008383 7.6e-115 418.3 474 47.7
Haze_13736 Corylus avellana HOM05D006594 ORTHO05D008383 1.7e-114 417.2 468 47.4
CARHR265100 Cardamine hirsuta HOM05D006594 ORTHO05D008383 1.9e-113 413.7 451 47.0
Thhalv10013484m.g Eutrema salsugineum HOM05D006594 ORTHO05D008383 4.1e-113 412.5 453 47.5
Sp6g14430 Schrenkiella parvula HOM05D006594 ORTHO05D008383 1.2e-112 411.0 451 46.6
AUR62021215 Chenopodium quinoa HOM05D006594 ORTHO05D008383 7.8e-112 408.3 411 50.9
THA.LOC104825095 Tarenaya hassleriana HOM05D006594 ORTHO05D008383 1.7e-111 407.1 449 45.7
Carub.0008s1227 Capsella rubella HOM05D006594 ORTHO05D008383 2.3e-111 406.8 451 46.1
LjContig00238g0014067 Lotus japonicus HOM05D006594 ORTHO05D008383 6.6e-111 405.2 457 48.8
Manes.06G145800 Manihot esculenta HOM05D006594 ORTHO05D008383 1.1e-110 404.4 467 46.9
BcaB08g35566 Brassica carinata HOM05D006594 ORTHO05D008383 1.9e-110 403.7 452 46.7
Aa31LG3G8560 Aethionema arabicum HOM05D006594 ORTHO05D008383 3.3e-110 402.9 451 45.9
BraA10t43068Z Brassica rapa HOM05D006594 ORTHO05D008383 5.6e-110 402.1 448 47.1
BcaC04g20605 Brassica carinata HOM05D006594 ORTHO05D008383 9.6e-110 401.4 451 47.0
C09p41600 Brassica napus HOM05D006594 ORTHO05D008383 9.6e-110 401.4 451 47.0
BolC9t57044H Brassica oleracea HOM05D006594 ORTHO05D008383 9.6e-110 401.4 451 47.0
AT5G52180 Arabidopsis thaliana HOM05D006594 ORTHO05D008383 1.2e-109 401.0 453 45.9
A10p09870 Brassica napus HOM05D006594 ORTHO05D008383 2.8e-109 399.8 448 47.3
AL8G26560 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 3.6e-109 399.4 451 45.9
Ca_10784_v3 Cicer arietinum L. HOM05D006594 ORTHO05D008383 3.6e-109 399.4 466 47.6
PSO478G3258 Papaver somniferum HOM05D006594 ORTHO05D008383 1.8e-108 397.1 448 49.3
FAN06G4553 Fragaria x ananassa HOM05D006594 ORTHO05D008383 9.0e-108 394.8 461 47.1
Phvul.007G067900 Phaseolus vulgaris HOM05D006594 ORTHO05D008383 9.0e-108 394.8 463 47.9
Ah.13g068460 Amaranthus hybridus HOM05D006594 ORTHO05D008383 2.6e-107 393.3 469 46.5
Medtr1g100767 Medicago truncatula HOM05D006594 ORTHO05D008383 5.8e-107 392.1 453 46.4
FAN10G1161 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.3e-106 391.0 459 46.8
Glyma.10G237700 Glycine max HOM05D006594 ORTHO05D008383 1.3e-106 391.0 468 48.1
Sed0005391 Sechium edule HOM05D006594 ORTHO05D008383 1.7e-106 390.6 417 49.4
GSVIVG01010594001 Vitis vinifera HOM05D006594 ORTHO05D008383 1.7e-106 390.6 444 48.4
FAN06G0009 Fragaria x ananassa HOM05D006594 ORTHO05D008383 3.8e-106 389.4 461 46.2
FAN01G0792 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.9e-105 387.1 452 46.5
Psat6g200680 Pisum sativum HOM05D006594 ORTHO05D008383 3.2e-105 386.3 456 46.9
Glyma.20G156900 Glycine max HOM05D006594 ORTHO05D008383 1.2e-104 384.4 467 47.3
Nitab4.5_0001508g0080 Nicotiana tabacum HOM05D006594 ORTHO05D008383 1.6e-104 384.0 235 80.0
Lalb_Chr06g0161051 Lupinus albus HOM05D006594 ORTHO05D008383 1.7e-103 380.6 465 46.9
TAR374G1009 Trochodendron aralioides HOM05D006594 ORTHO05D008383 2.3e-103 380.2 356 53.4
CDE11G0822 Ceratophyllum demersum HOM05D006594 ORTHO05D008383 3.0e-103 379.8 459 44.0
TPR.G14337 Trifolium pratense HOM05D006594 ORTHO05D008383 1.1e-97 361.3 442 46.4
FAN03G3172 Fragaria x ananassa HOM05D006594 ORTHO05D008383 4.6e-96 355.9 425 45.6
arahy.Tifrunner.gnm1.ann1.GIF0V2 Arachis hypogaea HOM05D006594 ORTHO05D008383 1.3e-95 354.4 396 47.7
arahy.Tifrunner.gnm1.ann1.MGJ2V1 Arachis hypogaea HOM05D006594 ORTHO05D008383 6.7e-95 352.1 409 46.7
MBI12_g14429_MAGBIO Magnolia biondii HOM05D006594 ORTHO05D008383 3.8e-90 336.3 392 48.2
Gohir.A12G259700 Gossypium hirsutum HOM05D006594 ORTHO05D008383 5.5e-89 332.4 368 48.4
Nitab4.5_0000716g0260 Nicotiana tabacum HOM05D006594 ORTHO05D008383 1.5e-86 324.3 315 59.4
AUR62016008 Chenopodium quinoa HOM05D006594 ORTHO05D008383 4.6e-80 302.8 435 41.6
ATR0757G038 Amborella trichopoda HOM05D006594 ORTHO05D008383 4.3e-78 296.2 598 33.3
Gohir.A08G100500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.2e-75 288.1 332 47.3
Gorai.004G119800 Gossypium raimondii HOM05D006594 ORTHO05D008383 8.5e-74 282.0 461 38.2
A06p20700 Brassica napus HOM05D006594 ORTHO05D008383 5.9e-67 259.2 235 53.6
unitig_0.g463 Utricularia gibba HOM05D006594 ORTHO05D008383 3.6e-64 250.0 260 51.2
SEGI_30493 Sequoiadendron giganteum HOM05D006594 ORTHO05D008383 6.5e-58 229.2 530 30.8
Thecc.03G173100 Theobroma cacao HOM05D006594 ORTHO05D008383 1.9e-57 227.6 254 46.5
FvH4_7g29210 Fragaria vesca HOM05D006594 ORTHO05D008383 4.7e-56 223.0 323 40.9
Gohir.D08G112040 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.4e-55 221.5 455 33.4
Lj1P995T25 Lonicera japonica HOM05D006594 ORTHO05D008383 2.9e-50 203.8 145 65.5
SMO116G0206 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 2.0e-46 191.0 469 30.5
Zm00001eb378500 Zea mays HOM05D006594 ORTHO05D008383 1.0e-42 178.7 447 33.1
Os06g0129000 Oryza sativa ssp. japonica HOM05D006594 ORTHO05D008383 2.0e-35 154.5 452 30.8
Mapoly0061s0021 Marchantia polymorpha HOM05D006594 ORTHO05D008383 4.5e-35 153.3 508 26.6
arahy.Tifrunner.gnm1.ann1.J8117K Arachis hypogaea HOM05D006594 ORTHO05D008383 3.3e-33 147.1 206 40.8
MD01G1198800 Malus domestica HOM05D006594 ORTHO05D008383 7.2e-33 146.0 456 28.7
unitig_0.g462 Utricularia gibba HOM05D006594 ORTHO05D008383 6.8e-31 139.4 150 52.0
arahy.Tifrunner.gnm1.ann1.PB1XHH Arachis hypogaea HOM05D006594 ORTHO05D008383 3.4e-30 137.1 249 34.1
Lj1E995T0 Lonicera japonica HOM05D006594 ORTHO05D008383 1.6e-27 128.3 132 53.0
AL1G10170 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 2.9e-26 124.0 123 50.4
arahy.Tifrunner.gnm1.ann1.A65ZGP Arachis hypogaea HOM05D006594 ORTHO05D008383 5.2e-23 113.2 198 37.9
Atru.chr1.484 Acer truncatum HOM05D006594 ORTHO05D008383 5.8e-22 109.8 96 61.5
Duzib068G0509 Durio zibethinus HOM05D006594 ORTHO05D008383 7.8e-19 99.4 176 35.8
SMO195G0004 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 6.8e-15 86.3 121 37.2
VMungo0331G1728 Vigna mungo HOM05D006594 ORTHO05D008383 2.0e-14 84.7 98 43.9
EL10Ac3g05712 Beta vulgaris HOM05D006594 ORTHO05D008383 2.2e-13 81.3 108 49.1
SMO195G0056 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 6.0e-11 73.2 131 32.1
MCO13G538 Micromonas commoda HOM05D006594 ORTHO05D008383 2.1e-08 64.7 240 24.6


User provided reference genes

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