Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 2.6e-55 218.4 103 100.0
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 5.4e-53 210.7 103 96.1
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 2.6e-47 191.8 103 84.5
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 5.8e-47 190.7 103 82.5
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 8.3e-46 186.8 102 81.4
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 6.0e-44 180.6 88 95.5
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 3.3e-34 148.3 108 66.7
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 5.8e-31 137.5 99 61.6
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 4.9e-30 134.4 103 57.3
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 8.3e-30 133.7 102 55.9
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 1.9e-29 132.5 103 56.3
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 3.2e-29 131.7 103 56.3
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 1.2e-28 129.8 98 56.1
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 2.7e-28 128.6 103 55.3
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 2.7e-28 128.6 103 55.3
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 3.5e-28 128.3 98 56.1
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 3.5e-28 128.3 103 54.4
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 4.6e-28 127.9 102 54.9
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 4.6e-28 127.9 103 54.4
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 1.3e-27 126.3 103 54.4
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 1.3e-27 126.3 103 54.4
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 2.3e-27 125.6 98 54.1
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 2.3e-27 125.6 98 54.1
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 3.0e-27 125.2 103 53.4
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 3.0e-27 125.2 103 54.4
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 3.9e-27 124.8 103 53.4
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 3.9e-27 124.8 102 52.9
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 6.6e-27 124.0 97 56.7
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 1.1e-26 123.2 102 52.9
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 1.1e-26 123.2 103 54.4
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 1.5e-26 122.9 95 54.7
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 1.5e-26 122.9 96 51.0
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 2.5e-26 122.1 102 52.0
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 2.5e-26 122.1 103 54.4
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 3.3e-26 121.7 103 51.5
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 4.3e-26 121.3 103 52.4
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 4.3e-26 121.3 102 52.0
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 5.6e-26 120.9 98 56.1
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 9.5e-26 120.2 100 56.0
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 9.5e-26 120.2 102 52.0
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.2e-25 119.8 103 50.5
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.2e-25 119.8 103 51.5
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 1.6e-25 119.4 103 52.4
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 1.6e-25 119.4 100 55.0
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 2.1e-25 119.0 103 48.5
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 2.8e-25 118.6 103 53.4
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 3.6e-25 118.2 95 55.8
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 3.6e-25 118.2 99 52.5
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 3.6e-25 118.2 89 56.2
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 4.7e-25 117.9 93 55.9
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 4.7e-25 117.9 96 52.1
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 4.7e-25 117.9 96 57.3
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 6.2e-25 117.5 103 49.5
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 1.4e-24 116.3 103 54.4
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 1.4e-24 116.3 103 51.5
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.4e-24 116.3 103 51.5
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.4e-24 116.3 103 51.5
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.4e-24 116.3 103 51.5
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 1.8e-24 115.9 104 51.9
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 1.8e-24 115.9 105 51.4
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 1.8e-24 115.9 104 51.9
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 1.8e-24 115.9 103 50.5
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 2.4e-24 115.5 98 52.0
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 5.2e-24 114.4 96 53.1
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 5.2e-24 114.4 96 52.1
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 5.2e-24 114.4 100 53.0
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 5.2e-24 114.4 103 54.4
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 6.8e-24 114.0 65 69.2
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 8.9e-24 113.6 96 53.1
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 8.9e-24 113.6 96 52.1
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 8.9e-24 113.6 101 51.5
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 1.2e-23 113.2 101 50.5
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 1.2e-23 113.2 89 52.8
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 1.2e-23 113.2 96 51.0
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 2.0e-23 112.5 98 54.1
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 3.4e-23 111.7 77 59.7
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 3.4e-23 111.7 61 70.5
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 7.6e-23 110.5 102 49.0
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 3.8e-22 108.2 96 49.0
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 4.9e-22 107.8 102 44.1
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 8.4e-22 107.1 101 49.5
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 1.4e-21 106.3 98 46.9
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 2.4e-21 105.5 100 48.0
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 4.2e-21 104.8 101 46.5
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 5.4e-21 104.4 97 50.5
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 5.4e-21 104.4 91 52.7
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 1.6e-20 102.8 93 47.3
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 2.1e-20 102.4 111 45.0
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 2.7e-20 102.1 101 43.6
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 4.6e-20 101.3 78 52.6
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 4.6e-20 101.3 122 44.3
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 4.6e-20 101.3 101 49.5
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 4.6e-20 101.3 101 49.5
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 1.3e-19 99.8 101 46.5
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 1.3e-19 99.8 101 46.5
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 1.7e-19 99.4 85 49.4
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 3.0e-19 98.6 74 52.7
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 5.1e-19 97.8 93 49.5
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 6.6e-19 97.4 95 45.3
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 6.6e-19 97.4 95 45.3
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 6.6e-19 97.4 98 48.0
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 1.1e-18 96.7 115 42.6
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 4.3e-18 94.7 98 43.9
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 1.2e-15 86.7 46 67.4
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 4.4e-15 84.7 87 47.1
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 4.4e-15 84.7 90 45.6
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 9.3e-13 77.0 105 40.0
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 2.1e-12 75.9 44 65.9
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 2.0e-07 59.3 103 30.1


User provided reference genes

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