Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 2.5e-116 422.2 221 100.0
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 2.1e-115 419.1 221 99.1
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 1.7e-112 409.5 221 96.4
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 5.6e-100 367.9 221 86.4
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 3.8e-88 328.6 191 86.9
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 1.4e-87 326.6 191 86.4
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 1.4e-87 326.6 221 78.3
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 1.8e-85 319.7 207 77.3
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 2.5e-84 315.8 218 74.3
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 2.5e-84 315.8 212 76.4
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 9.7e-84 313.9 223 70.0
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 6.3e-83 311.2 230 70.9
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 8.2e-83 310.8 221 71.9
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 1.8e-82 309.7 205 78.5
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 4.1e-82 308.5 223 69.5
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 1.5e-81 306.6 211 75.4
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 2.6e-81 305.8 217 74.2
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 4.5e-81 305.1 205 72.2
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 4.5e-81 305.1 203 77.8
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 1.3e-80 303.5 203 76.4
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 2.2e-80 302.8 213 73.2
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 2.9e-80 302.4 212 74.1
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 2.9e-80 302.4 205 73.2
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 2.5e-79 299.3 204 73.0
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 3.2e-79 298.9 197 75.1
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 3.2e-79 298.9 207 74.4
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 4.2e-79 298.5 213 71.4
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 5.5e-79 298.1 225 71.6
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 7.2e-79 297.7 205 72.7
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 9.4e-79 297.4 197 74.6
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 1.2e-78 297.0 194 75.8
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 2.1e-78 296.2 202 74.3
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 2.7e-78 295.8 197 73.6
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 2.7e-78 295.8 227 67.0
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 3.6e-78 295.4 226 71.7
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 4.6e-78 295.0 205 73.2
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 4.6e-78 295.0 202 74.3
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 6.1e-78 294.7 202 73.8
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 7.9e-78 294.3 202 73.8
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 7.9e-78 294.3 207 72.9
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 1.0e-77 293.9 227 69.6
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 1.0e-77 293.9 201 74.1
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 1.0e-77 293.9 190 78.4
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.8e-77 293.1 202 73.3
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 3.0e-77 292.4 197 72.1
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 3.9e-77 292.0 220 69.1
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 3.9e-77 292.0 226 69.9
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 6.7e-77 291.2 197 72.6
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 1.1e-76 290.4 232 68.1
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 1.1e-76 290.4 219 71.2
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 2.0e-76 289.7 221 70.1
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 2.6e-76 289.3 226 68.1
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 4.3e-76 288.5 211 68.7
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 9.7e-76 287.3 227 66.5
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 4.8e-75 285.0 186 76.3
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 6.3e-75 284.6 208 66.8
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 6.3e-75 284.6 210 70.5
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 8.2e-75 284.3 191 74.3
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 4.1e-74 282.0 213 68.5
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 5.3e-74 281.6 208 69.7
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 1.5e-73 280.0 222 65.8
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 1.7e-72 276.6 211 67.8
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 3.8e-72 275.4 228 64.0
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 1.4e-71 273.5 201 67.2
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 2.5e-71 272.7 172 80.8
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 7.2e-71 271.2 219 65.3
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 2.1e-70 269.6 219 63.5
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 2.7e-70 269.2 219 63.9
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 3.6e-70 268.9 216 64.8
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.8e-69 266.5 202 68.8
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 2.3e-69 266.2 178 74.7
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 3.9e-69 265.4 201 63.7
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 5.7e-68 261.5 185 66.5
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 5.7e-68 261.5 194 69.1
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 1.7e-67 260.0 224 62.1
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 3.7e-67 258.8 208 63.5
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 6.3e-67 258.1 197 69.5
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 1.8e-66 256.5 188 68.6
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 5.3e-66 255.0 185 67.6
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 7.0e-66 254.6 181 69.6
CAN.G204.5 Capsicum annuum HOM05D004948 ORTHO05D005824 2.0e-65 253.1 182 73.6
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 3.5e-65 252.3 177 73.4
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 1.3e-64 250.4 178 68.5
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 1.3e-64 250.4 167 71.9
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 6.5e-64 248.1 178 68.5
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 6.5e-64 248.1 220 60.9
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 4.2e-63 245.4 204 62.3
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 5.5e-63 245.0 207 62.3
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 7.2e-63 244.6 208 59.6
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 7.2e-63 244.6 203 62.6
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 9.4e-63 244.2 203 62.6
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 1.2e-62 243.8 181 68.5
BcaC03g14431 Brassica carinata HOM05D004948 ORTHO05D005824 4.7e-62 241.9 207 61.8
C02p18470 Brassica napus HOM05D004948 ORTHO05D005824 4.7e-62 241.9 207 61.8
BolC2t07987H Brassica oleracea HOM05D004948 ORTHO05D005824 4.7e-62 241.9 207 61.8
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 1.0e-61 240.7 172 69.2
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 1.0e-61 240.7 204 64.2
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 2.3e-61 239.6 172 69.2
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 2.3e-61 239.6 172 69.2
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 5.2e-61 238.4 169 69.2
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 5.2e-61 238.4 210 60.5
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 5.2e-61 238.4 210 60.5
Actinidia31860 Actinidia chinensis HOM05D004948 ORTHO05D005824 3.7e-59 232.3 227 60.4
Cc02_g01980 Coffea canephora HOM05D004948 ORTHO05D005824 7.0e-58 228.0 155 77.4
Lj1g0003063 Lotus japonicus HOM05D004948 ORTHO05D005824 2.7e-57 226.1 156 72.4
Os01g0621700 Oryza sativa ssp. japonica HOM05D004948 ORTHO05D005824 1.7e-56 223.4 171 63.7
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 2.2e-56 223.0 152 72.4
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 2.2e-56 223.0 152 72.4
Ca_16670_v3 Cicer arietinum L. HOM05D004948 ORTHO05D005824 6.5e-56 221.5 156 71.2
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 5.5e-55 218.4 152 70.4
DCAR_014528 Daucus carota HOM05D000121 ORTHO05D005824 2.1e-54 216.5 146 71.9
Glyma.04G238900 Glycine max HOM05D004948 ORTHO05D005824 8.0e-54 214.5 155 72.3
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 4.0e-53 212.2 177 62.1
Psat0s97g0080 Pisum sativum HOM05D004948 ORTHO05D005824 4.0e-53 212.2 155 69.0
TPR.G33862 Trifolium pratense HOM05D004948 ORTHO05D005824 8.8e-53 211.1 155 67.1
HPP92_024433 Vanilla planifolia HOM05D004948 ORTHO05D005824 1.2e-52 210.7 151 66.2
CDE04G0161 Ceratophyllum demersum HOM05D004948 ORTHO05D005824 1.5e-52 210.3 189 54.5
Glyma.06G124800 Glycine max HOM05D004948 ORTHO05D005824 3.4e-52 209.1 155 70.3
Nitab4.5_0002176g0030 Nicotiana tabacum HOM05D004948 ORTHO05D005824 5.7e-52 208.4 126 86.5
Lalb_Chr08g0240671 Lupinus albus HOM05D004948 ORTHO05D005824 3.7e-51 205.7 156 67.9
unitig_747.g21853 Utricularia gibba HOM05D004948 ORTHO05D005824 7.0e-50 201.4 157 66.9
Phvul.009G135700 Phaseolus vulgaris HOM05D004948 ORTHO05D005824 1.2e-49 200.7 155 65.8
Medtr3g090670 Medicago truncatula HOM05D004948 ORTHO05D005824 2.0e-49 199.9 144 69.4
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea HOM05D004948 ORTHO05D005824 1.3e-48 197.2 156 61.5
Zm00001eb432120 Zea mays HOM05D004948 ORTHO05D005824 5.0e-48 195.3 146 67.1
SHI54648 Sapria himalayana HOM05D004948 ORTHO05D005824 8.5e-48 194.5 190 58.4
SHI54754 Sapria himalayana HOM05D004948 ORTHO05D005824 8.5e-48 194.5 190 58.4
Mapoly0143s0028 Marchantia polymorpha HOM05D004948 ORTHO05D005824 2.5e-47 193.0 214 48.6
TWI39G0355 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 3.2e-47 192.6 137 71.5
VMungo1309G3087 Vigna mungo HOM05D004948 ORTHO05D005824 3.2e-47 192.6 155 60.6
Ah.07g206090 Amaranthus hybridus HOM05D004948 ORTHO05D005824 4.2e-47 192.2 133 71.4
Actinidia08617 Actinidia chinensis HOM05D004948 ORTHO05D005824 6.1e-46 188.3 144 71.5
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea HOM05D004948 ORTHO05D005824 8.0e-46 188.0 211 49.3
SMO361G0401 Selaginella moellendorffii HOM05D004948 ORTHO05D005824 8.8e-45 184.5 199 50.8
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis HOM05D004948 ORTHO05D005824 9.8e-44 181.0 212 47.6
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.2e-43 179.9 118 77.1
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 3.7e-43 179.1 178 52.8
CSS0025713 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.1e-39 167.5 106 79.2
SEGI_09652 Sequoiadendron giganteum HOM05D004948 ORTHO05D005824 1.9e-39 166.8 137 59.9
CSS0008262 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 3.3e-39 166.0 106 78.3
BolC9t57186H Brassica oleracea HOM05D004948 ORTHO05D005824 6.1e-38 161.8 203 46.8
BcaC04g20470 Brassica carinata HOM05D004948 ORTHO05D005824 1.8e-37 160.2 205 45.4
C09p43150 Brassica napus HOM05D004948 ORTHO05D005824 1.7e-35 153.7 197 46.7
CBR_g39340 Chara braunii HOM05D004948 ORTHO05D005824 1.1e-34 151.0 161 49.7
Lj1P1012T60 Lonicera japonica HOM05D004948 ORTHO05D005824 1.6e-33 147.1 107 71.0
BcaB08g35692 Brassica carinata HOM05D004948 ORTHO05D005824 1.3e-24 117.5 108 58.3
Lalb_Chr23g0271431 Lupinus albus HOM05D004948 ORTHO05D005824 2.6e-20 103.2 156 42.9
MCO05G504 Micromonas commoda HOM05D004948 ORTHO05D005824 1.7e-19 100.5 205 34.1
CSS0011379 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.1e-17 93.6 64 70.3
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.1e-17 93.6 91 59.3
CSS0007759 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.5e-15 87.4 86 52.3


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