Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 4.8e-51 204.1 99 100.0
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 5.3e-50 200.7 99 98.0
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 3.8e-48 194.5 99 94.9
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 2.1e-46 188.7 99 90.9
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 1.8e-42 175.6 99 84.8
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 1.2e-41 172.9 99 86.9
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 5.9e-33 144.1 92 76.1
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 1.0e-32 143.3 97 69.1
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 2.3e-32 142.1 111 64.9
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 2.9e-32 141.7 77 84.4
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 5.0e-32 141.0 118 61.9
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 1.1e-31 139.8 101 70.3
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 2.5e-31 138.7 81 77.8
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 2.5e-31 138.7 99 67.7
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 3.3e-31 138.3 80 83.8
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 4.3e-31 137.9 116 66.4
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 5.6e-31 137.5 76 81.6
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 7.3e-31 137.1 103 69.9
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 7.3e-31 137.1 78 80.8
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 9.5e-31 136.7 109 67.0
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 1.2e-30 136.3 98 68.4
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 1.2e-30 136.3 78 82.1
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 1.2e-30 136.3 109 66.1
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 2.1e-30 135.6 78 82.1
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 2.8e-30 135.2 78 82.1
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 3.6e-30 134.8 76 81.6
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 3.6e-30 134.8 87 74.7
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 6.1e-30 134.0 107 64.5
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 6.1e-30 134.0 82 79.3
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 6.1e-30 134.0 93 72.0
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 8.0e-30 133.7 101 67.3
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 8.0e-30 133.7 99 66.7
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 1.0e-29 133.3 91 68.1
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 1.0e-29 133.3 81 76.5
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 1.4e-29 132.9 94 72.3
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 1.4e-29 132.9 98 69.4
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 1.8e-29 132.5 92 72.8
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 1.8e-29 132.5 97 64.9
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 1.8e-29 132.5 68 85.3
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 1.8e-29 132.5 76 78.9
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 3.0e-29 131.7 111 60.4
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 3.0e-29 131.7 101 66.3
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 3.0e-29 131.7 94 71.3
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 3.0e-29 131.7 100 62.0
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 3.0e-29 131.7 109 60.6
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 5.2e-29 131.0 117 61.5
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 5.2e-29 131.0 101 66.3
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 5.2e-29 131.0 78 76.9
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 6.8e-29 130.6 88 71.6
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 6.8e-29 130.6 88 71.6
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 6.8e-29 130.6 96 65.6
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 6.8e-29 130.6 109 60.6
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 8.9e-29 130.2 79 74.7
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 8.9e-29 130.2 76 80.3
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 8.9e-29 130.2 76 80.3
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 8.9e-29 130.2 79 74.7
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 1.5e-28 129.4 79 75.9
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 2.0e-28 129.0 76 78.9
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 2.0e-28 129.0 71 83.1
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 3.4e-28 128.3 79 72.2
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 4.4e-28 127.9 81 75.3
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 7.5e-28 127.1 76 77.6
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 9.8e-28 126.7 86 72.1
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 1.3e-27 126.3 80 75.0
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 1.3e-27 126.3 80 75.0
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 1.3e-27 126.3 97 68.0
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 1.7e-27 125.9 107 61.7
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 2.2e-27 125.6 74 79.7
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 2.2e-27 125.6 109 61.5
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 2.9e-27 125.2 99 65.7
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 4.9e-27 124.4 77 76.6
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 4.9e-27 124.4 107 63.6
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 6.4e-27 124.0 83 69.9
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 8.3e-27 123.6 80 72.5
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 8.3e-27 123.6 80 72.5
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 8.3e-27 123.6 80 72.5
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 8.3e-27 123.6 78 76.9
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 1.1e-26 123.2 80 72.5
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 1.1e-26 123.2 80 72.5
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 1.1e-26 123.2 80 72.5
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 1.1e-26 123.2 80 71.2
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 1.1e-26 123.2 82 74.4
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 1.4e-26 122.9 78 75.6
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 1.8e-26 122.5 74 75.7
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 2.4e-26 122.1 79 73.4
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 3.2e-26 121.7 81 70.4
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 4.1e-26 121.3 77 71.4
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 5.4e-26 120.9 78 73.1
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 7.0e-26 120.6 95 68.4
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 1.2e-25 119.8 63 85.7
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 1.2e-25 119.8 74 75.7
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 3.5e-25 118.2 67 74.6
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 4.6e-25 117.9 79 68.4
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 4.6e-25 117.9 107 59.8
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 5.9e-25 117.5 68 73.5
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 7.8e-25 117.1 80 68.8
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 1.0e-24 116.7 114 53.5
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 1.7e-24 115.9 62 82.3
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 3.9e-24 114.8 91 62.6
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 1.1e-23 113.2 62 80.6
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 2.8e-22 108.6 65 73.8
AUR62023670 Chenopodium quinoa HOM05D007196 ORTHO05D001134 2.8e-22 108.6 74 71.6
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 3.1e-21 105.1 85 60.0
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 1.9e-15 85.9 51 78.4
Haze_26518 Corylus avellana HOM05D007196 ORTHO05D009100 6.2e-14 80.9 63 55.6
Cc05_g04470 Coffea canephora HOM05D007196 ORTHO05D009100 8.9e-13 77.0 97 48.5
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 7.1e-10 67.4 86 51.2
VMungo0464G1496 Vigna mungo HOM05D007196 ORTHO05D009100 2.7e-09 65.5 55 63.6
Nn4g26452 Nelumbo nucifera HOM05D007196 ORTHO05D009100 3.5e-09 65.1 40 75.0
FAN03G1444 Fragaria x ananassa HOM05D000077 ORTHO05D000981 1.5e-07 59.7 45 62.2
ATR0757G208 Amborella trichopoda HOM05D007196 ORTHO05D009100 5.6e-07 57.8 74 48.6


User provided reference genes

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