Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g001860 Solanum pennellii HOM05D012094 ORTHO05D011876 2.2e-144 515.8 291 100.0
Solyc03g005850.2 Solanum lycopersicum HOM05D012094 ORTHO05D011876 5.0e-104 381.7 219 92.2
Nitab4.5_0003714g0090 Nicotiana tabacum HOM05D012094 ORTHO05D011876 5.4e-34 149.1 347 35.7
Peaxi162Scf00653g00416 Petunia axillaris HOM05D012094 ORTHO05D011876 2.1e-30 137.1 260 39.6
Peaxi162Scf00121g01412 Petunia axillaris HOM05D012094 ORTHO05D011876 1.9e-23 114.0 153 45.8
Nitab4.5_0000206g0120 Nicotiana tabacum HOM05D012094 ORTHO05D011876 7.3e-23 112.1 149 49.7
Nitab4.5_0001283g0020 Nicotiana tabacum HOM05D012094 ORTHO05D011876 3.6e-22 109.8 369 30.6
PGSC0003DMG400003088 Solanum tuberosum HOM05D012094 ORTHO05D011876 4.8e-22 109.4 397 31.0
Sopen02g020380 Solanum pennellii HOM05D012094 ORTHO05D011876 3.1e-21 106.7 396 30.3
Dinv03635 Davidia involucrata HOM05D009013 ORTHO05D009761 1.5e-20 104.4 350 30.6
Nitab4.5_0001826g0030 Nicotiana tabacum HOM05D012094 ORTHO05D011876 5.8e-20 102.4 189 41.8
Oeu001056.1 Olea europaea HOM05D012266 ORTHO05D011876 4.6e-17 92.8 320 29.1
Oeu046855.1 Olea europaea HOM05D012266 ORTHO05D011876 1.5e-15 87.8 327 30.0
Hma1.2p1_0015F.1_g010420 Hydrangea macrophylla HOM05D009013 ORTHO05D009761 4.0e-13 79.7 321 27.7
Oeu021526.1 Olea europaea HOM05D012266 ORTHO05D011876 2.6e-12 77.0 339 27.4
Nitab4.5_0002814g0140 Nicotiana tabacum HOM05D040149 ORTHO05D036947 1.3e-11 74.7 241 29.0
CSS0045433 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 3.8e-11 73.2 148 38.5
MSTRG.13241 Avicennia marina HOM05D012266 ORTHO05D011876 8.4e-11 72.0 114 42.1
Cc00_g03210 Coffea canephora HOM05D012094 ORTHO05D009761 3.2e-10 70.1 124 37.9
SalBow7G2103 Salvia bowleyana HOM05D012266 ORTHO05D011876 5.5e-10 69.3 290 26.9
Peaxi162Scf00649g00008 Petunia axillaris HOM05D012094 ORTHO05D011876 1.2e-09 68.2 298 27.9
Actinidia39545 Actinidia chinensis HOM05D014645 ORTHO05D009761 6.0e-09 65.9 82 43.9
Solyc02g071320.4 Solanum lycopersicum HOM05D012094 ORTHO05D011876 6.0e-09 65.9 338 28.1
MSTRG.16199 Avicennia marina HOM05D012266 ORTHO05D011876 1.0e-08 65.1 334 24.9
Actinidia27190 Actinidia chinensis HOM05D014645 ORTHO05D009761 1.8e-08 64.3 82 42.7
Actinidia07666 Actinidia chinensis HOM05D014645 ORTHO05D009761 8.7e-08 62.0 114 37.7
Lj4g0005206 Lotus japonicus HOM05D009013 ORTHO05D009761 8.7e-08 62.0 318 26.1
Actinidia19483 Actinidia chinensis HOM05D014645 ORTHO05D009761 1.1e-07 61.6 140 37.9
Atru.chr10.1414 Acer truncatum HOM05D009852 ORTHO05D009761 1.5e-07 61.2 308 25.6
CiPaw.10G096600 Carya illinoinensis HOM05D009013 ORTHO05D009761 1.9e-07 60.8 340 26.2
Peaxi162Scf00061g00111 Petunia axillaris HOM05D012094 ORTHO05D011876 1.9e-07 60.8 121 46.3
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 4.3e-07 59.7 302 25.8
Duzib192G0106 Durio zibethinus HOM05D009852 ORTHO05D009761 7.4e-07 58.9 298 27.2
Lalb_Chr12g0204801 Lupinus albus HOM05D009013 ORTHO05D009761 7.4e-07 58.9 315 26.3
VMungo1309G2255 Vigna mungo HOM05D009013 ORTHO05D009761 7.4e-07 58.9 334 24.6
Thecc.01G161600 Theobroma cacao HOM05D015707 ORTHO05D011736 1.6e-06 57.8 80 45.0
DCAR_007913 Daucus carota HOM05D009013 ORTHO05D009761 2.8e-06 57.0 149 29.5
Medtr2g049330 Medicago truncatula HOM05D009013 ORTHO05D009761 2.8e-06 57.0 272 27.6
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 2.8e-06 57.0 337 24.6
TAR627G0709 Trochodendron aralioides HOM05D041535 ORTHO05D030214 2.8e-06 57.0 32 68.8
Migut.H01393 Erythranthe guttata HOM05D012266 ORTHO05D011876 3.7e-06 56.6 43 55.8
Glyma.08G121600 Glycine max HOM05D009013 ORTHO05D009761 3.7e-06 56.6 304 27.3
Gorai.010G164100 Gossypium raimondii HOM05D009852 ORTHO05D009761 4.8e-06 56.2 293 24.6
QL05p060720 Quercus lobata HOM05D009013 ORTHO05D009761 4.8e-06 56.2 350 24.9
EL10Ac8g19799 Beta vulgaris HOM05D018558 ORTHO05D018254 6.2e-06 55.8 275 25.8
Lalb_Chr07g0186121 Lupinus albus HOM05D009013 ORTHO05D009761 6.2e-06 55.8 119 36.1
Lalb_Chr13g0295461 Lupinus albus HOM05D009013 ORTHO05D009761 6.2e-06 55.8 112 33.0


User provided reference genes

Program Settings