Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 4.8e-143 511.1 255 100.0
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 4.5e-141 504.6 255 98.4
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 6.0e-138 494.2 255 96.5
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 5.3e-126 454.5 255 89.8
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 3.3e-120 435.3 255 85.9
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 1.6e-119 433.0 255 85.1
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 2.0e-117 426.0 254 84.6
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 2.0e-96 356.3 255 71.0
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 2.4e-94 349.4 255 69.4
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 1.3e-92 343.6 254 69.3
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 2.2e-92 342.8 286 64.0
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 5.0e-92 341.7 247 69.2
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 1.1e-91 340.5 248 67.3
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 1.1e-91 340.5 256 68.0
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 4.2e-91 338.6 238 71.0
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 7.2e-91 337.8 255 68.2
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 2.1e-90 336.3 248 70.6
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 2.7e-90 335.9 237 70.5
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 2.7e-90 335.9 245 69.4
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 6.1e-90 334.7 263 67.3
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 8.0e-90 334.3 241 70.1
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 1.0e-89 334.0 258 64.7
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 1.8e-89 333.2 257 65.8
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 4.0e-89 332.0 246 66.7
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 4.0e-89 332.0 256 66.0
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 8.8e-89 330.9 254 67.3
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 2.0e-88 329.7 255 65.1
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 7.5e-88 327.8 244 69.3
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 9.7e-88 327.4 253 65.6
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 1.7e-87 326.6 241 68.9
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 1.7e-87 326.6 256 64.8
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 1.7e-87 326.6 245 66.9
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 1.7e-87 326.6 249 67.9
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 2.2e-87 326.2 256 66.0
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 2.8e-87 325.9 254 66.5
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 3.7e-87 325.5 241 68.0
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 3.7e-87 325.5 241 67.6
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 4.8e-87 325.1 240 68.8
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 6.3e-87 324.7 258 65.5
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 6.3e-87 324.7 256 65.2
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 6.3e-87 324.7 241 67.2
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 8.3e-87 324.3 244 64.8
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 1.1e-86 323.9 244 66.8
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 1.1e-86 323.9 238 67.6
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 1.1e-86 323.9 239 67.8
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 1.1e-86 323.9 254 65.0
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 1.4e-86 323.6 256 64.5
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 3.1e-86 322.4 246 65.4
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 5.3e-86 321.6 234 69.7
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 5.3e-86 321.6 250 66.4
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 9.1e-86 320.9 232 66.4
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 1.6e-85 320.1 239 68.2
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 2.2e-84 316.2 244 65.6
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 6.5e-84 314.7 244 63.1
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 8.5e-84 314.3 235 69.4
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 1.1e-83 313.9 287 56.8
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 1.1e-83 313.9 281 60.5
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 4.2e-83 312.0 244 66.4
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 7.2e-83 311.2 245 64.1
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 9.4e-83 310.8 235 67.7
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 1.6e-82 310.1 248 64.1
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 3.6e-82 308.9 244 64.8
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 6.1e-82 308.1 244 64.8
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 5.2e-81 305.1 281 59.4
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 1.2e-80 303.9 250 62.0
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 1.2e-80 303.9 280 59.3
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 1.5e-80 303.5 262 60.3
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 4.4e-80 302.0 255 60.0
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 4.4e-80 302.0 255 60.0
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 4.4e-80 302.0 280 59.3
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 1.1e-78 297.4 264 59.5
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 1.4e-78 297.0 255 60.4
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 1.4e-78 297.0 251 60.6
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 4.1e-78 295.4 242 64.0
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 5.4e-78 295.0 251 61.4
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 7.0e-78 294.7 257 58.8
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 2.0e-77 293.1 257 58.8
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 2.0e-77 293.1 257 58.8
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 4.5e-77 292.0 275 57.8
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 5.9e-77 291.6 217 65.4
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 1.0e-76 290.8 270 58.1
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 1.3e-76 290.4 237 60.3
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 2.3e-76 289.7 256 58.6
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 4.2e-75 285.4 254 58.3
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 8.0e-74 281.2 260 55.8
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 6.8e-73 278.1 274 56.2
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 1.2e-72 277.3 280 52.5
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 3.4e-72 275.8 259 56.8
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 5.7e-72 275.0 260 55.0
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 9.8e-72 274.2 246 54.1
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 1.7e-71 273.5 237 58.6
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 2.4e-70 269.6 282 53.9
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 7.0e-70 268.1 247 56.3
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 9.5e-67 257.7 237 59.1
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 6.8e-65 251.5 246 58.1
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 2.0e-64 250.0 189 66.1
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 8.3e-63 244.6 250 51.6
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 1.1e-59 234.2 178 65.7
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 4.6e-53 212.2 223 51.6
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 9.5e-51 204.5 257 41.2
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 1.1e-49 201.1 272 41.5
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 3.7e-47 192.6 132 67.4
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 1.6e-45 187.2 260 45.8
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 2.1e-42 176.8 244 46.3
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 3.6e-42 176.0 125 66.4
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 4.0e-41 172.6 168 48.8
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 3.4e-40 169.5 257 42.0
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 1.4e-33 147.5 121 55.4
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 9.0e-25 118.2 149 50.3
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 1.5e-24 117.5 133 51.9
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 7.1e-22 108.6 140 39.3
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 7.4e-19 98.6 110 54.5
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 8.1e-18 95.1 111 51.4
Actinidia36205 Actinidia chinensis HOM05D006878 ORTHO05D008579 2.8e-10 70.1 46 67.4
FAN23G0356 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.2e-08 64.7 63 46.0
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.7e-07 60.8 38 76.3
Pp3c4_16200 Physcomitrium patens HOM05D006878 ORTHO05D008579 9.3e-06 55.1 133 31.6


User provided reference genes

Program Settings