Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g038450 Solanum pennellii HOM05D003681 ORTHO05D004703 0.0e+00 1389.8 726 100.0
Solyc02g093810.3 Solanum lycopersicum HOM05D003681 ORTHO05D004703 0.0e+00 1371.3 726 98.9
PGSC0003DMG400020227 Solanum tuberosum HOM05D003681 ORTHO05D004703 0.0e+00 1342.8 726 96.8
CAN.G473.58 Capsicum annuum HOM05D003681 ORTHO05D004703 0.0e+00 1295.0 733 93.3
Peaxi162Scf00420g00351 Petunia axillaris HOM05D003681 ORTHO05D004703 0.0e+00 1186.0 717 87.4
Nitab4.5_0001863g0130 Nicotiana tabacum HOM05D003681 ORTHO05D004703 0.0e+00 1153.7 717 85.9
PGSC0003DMG400006971 Solanum tuberosum HOM05D003681 ORTHO05D004703 0.0e+00 1108.2 735 81.0
Sopen02g017120 Solanum pennellii HOM05D003681 ORTHO05D004703 0.0e+00 1097.0 737 80.2
CAN.G1057.25 Capsicum annuum HOM05D003681 ORTHO05D004703 0.0e+00 1078.9 737 79.8
Solyc02g067990.3 Solanum lycopersicum HOM05D003681 ORTHO05D004703 0.0e+00 1076.6 720 80.3
Nitab4.5_0000040g0490 Nicotiana tabacum HOM05D003681 ORTHO05D004703 1.1e-309 1066.2 740 79.2
Nitab4.5_0008718g0020 Nicotiana tabacum HOM05D003681 ORTHO05D004703 3.4e-303 1044.6 726 78.9
Cc07_g00400 Coffea canephora HOM05D003681 ORTHO05D004703 9.6e-298 1026.5 732 76.4
Peaxi162Scf00080g01724 Petunia axillaris HOM05D003681 ORTHO05D004703 1.2e-295 1019.6 719 77.3
Dinv33384 Davidia involucrata HOM05D003681 ORTHO05D004703 1.2e-292 1009.6 746 74.4
Dinv25694 Davidia involucrata HOM05D003681 ORTHO05D004703 2.1e-289 998.8 745 73.4
Actinidia18423 Actinidia chinensis HOM05D003681 ORTHO05D004703 2.4e-288 995.3 742 74.0
Atru.chr6.2486 Acer truncatum HOM05D003681 ORTHO05D004703 2.6e-287 991.9 736 73.0
Ciclev10014307m.g Citrus clementina HOM05D003681 ORTHO05D004703 2.2e-286 988.8 722 73.0
QL02p072923 Quercus lobata HOM05D003681 ORTHO05D004703 1.9e-285 985.7 749 71.7
CSS0025950 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 1.6e-284 982.6 744 73.7
MSTRG.3111 Avicennia marina HOM05D003681 ORTHO05D004703 2.7e-284 981.9 736 73.2
Lj7A605G77 Lonicera japonica HOM05D003681 ORTHO05D004703 1.3e-283 979.5 733 74.9
GSVIVG01001851001 Vitis vinifera HOM05D003681 ORTHO05D004703 1.1e-282 976.5 749 72.1
Manes.17G107300 Manihot esculenta HOM05D003681 ORTHO05D004703 2.5e-282 975.3 738 71.7
Thecc.04G027500 Theobroma cacao HOM05D003681 ORTHO05D004703 4.3e-282 974.5 735 71.3
CiPaw.04G033000 Carya illinoinensis HOM05D003681 ORTHO05D004703 1.4e-280 969.5 748 70.9
Actinidia16950 Actinidia chinensis HOM05D003681 ORTHO05D004703 3.1e-280 968.4 742 72.8
Cpa.g.sc130.41 Carica papaya HOM05D003681 ORTHO05D004703 3.1e-280 968.4 748 71.0
CiPaw.03G050400 Carya illinoinensis HOM05D003681 ORTHO05D004703 4.5e-279 964.5 748 70.9
TAR374G1530 Trochodendron aralioides HOM05D003681 ORTHO05D004703 4.5e-279 964.5 748 71.0
CANSAT64G2654 Cannabis sativa HOM05D003681 ORTHO05D004703 1.0e-278 963.4 752 69.7
Potri.001G337600 Populus trichocarpa HOM05D003681 ORTHO05D004703 1.7e-278 962.6 733 71.6
Manes.15G156300 Manihot esculenta HOM05D003681 ORTHO05D004703 8.4e-278 960.3 740 70.7
TAR622G1195 Trochodendron aralioides HOM05D003681 ORTHO05D004703 2.5e-277 958.7 750 70.9
MD09G1017400 Malus domestica HOM05D003681 ORTHO05D004703 3.2e-277 958.4 735 71.6
Gohir.D09G033600 Gossypium hirsutum HOM05D003681 ORTHO05D004703 7.1e-277 957.2 753 68.9
Migut.H00059 Erythranthe guttata HOM05D003681 ORTHO05D004703 9.3e-277 956.8 735 71.2
Gorai.006G038600 Gossypium raimondii HOM05D003681 ORTHO05D004703 9.3e-277 956.8 753 68.8
MD17G1018200 Malus domestica HOM05D003681 ORTHO05D004703 3.5e-276 954.9 734 71.7
Potri.001G337700 Populus trichocarpa HOM05D003681 ORTHO05D004703 1.8e-275 952.6 735 71.4
Hma1.2p1_0279F.1_g112260 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 6.7e-275 950.7 777 69.1
Gohir.A11G065000 Gossypium hirsutum HOM05D003681 ORTHO05D004703 2.5e-274 948.7 735 69.8
CSS0035050 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 9.7e-274 946.8 741 71.3
Duzib187G0106 Durio zibethinus HOM05D003681 ORTHO05D004703 1.6e-273 946.0 735 69.5
Prupe.3G299500 Prunus persica HOM05D003681 ORTHO05D004703 3.7e-273 944.9 747 69.5
Gohir.A09G033400 Gossypium hirsutum HOM05D003681 ORTHO05D004703 8.2e-273 943.7 753 68.0
TWI12G0555 Tripterygium wilfordii HOM05D003681 ORTHO05D004703 1.8e-272 942.6 747 68.9
Sc03g0006880 Simmondsia chinensis HOM05D003681 ORTHO05D004703 2.4e-272 942.2 740 69.7
Oeu050433.3 Olea europaea HOM05D003681 ORTHO05D004703 1.3e-270 936.4 746 70.0
SGA_v2.0_scaffold18G08242 Striga asiatica HOM05D003681 ORTHO05D004703 2.2e-270 935.6 751 70.2
TWI36G0744 Tripterygium wilfordii HOM05D003681 ORTHO05D004703 8.5e-270 933.7 747 68.3
Haze_14813 Corylus avellana HOM05D003681 ORTHO05D004703 4.2e-269 931.4 759 68.4
Glyma.19G077600 Glycine max HOM05D003681 ORTHO05D004703 4.2e-269 931.4 736 70.2
Glyma.05G073400 Glycine max HOM05D003681 ORTHO05D004703 5.5e-269 931.0 736 69.6
Phvul.004G057300 Phaseolus vulgaris HOM05D003681 ORTHO05D004703 7.2e-269 930.6 739 69.6
PGR142G3554 Punica granatum HOM05D003681 ORTHO05D004703 1.6e-268 929.5 748 69.0
SalBow1G2960 Salvia bowleyana HOM05D003681 ORTHO05D004703 2.1e-268 929.1 716 71.8
SalBow1G7977 Salvia bowleyana HOM05D003681 ORTHO05D004703 2.1e-268 929.1 716 71.8
VMungo0464G1197 Vigna mungo HOM05D003681 ORTHO05D004703 2.7e-268 928.7 734 69.9
Gohir.D11G069300 Gossypium hirsutum HOM05D003681 ORTHO05D004703 3.6e-268 928.3 735 68.7
Eucgr.I01693 Eucalyptus grandis HOM05D003681 ORTHO05D004703 6.1e-268 927.5 747 68.4
Gohir.D10G085200 Gossypium hirsutum HOM05D003681 ORTHO05D004703 1.8e-267 926.0 735 68.0
Aa31LG9G900 Aethionema arabicum HOM05D003681 ORTHO05D004703 2.3e-267 925.6 750 68.0
Gorai.007G074100 Gossypium raimondii HOM05D003681 ORTHO05D004703 3.0e-267 925.2 735 68.7
Thhalv10027657m.g Eutrema salsugineum HOM05D003681 ORTHO05D004703 6.7e-267 924.1 748 68.9
Cfa007279 Carpinus fangiana HOM05D003681 ORTHO05D004703 8.8e-267 923.7 718 70.5
Gorai.011G093100 Gossypium raimondii HOM05D003681 ORTHO05D004703 1.5e-266 922.9 735 68.0
Sp7g01150 Schrenkiella parvula HOM05D003681 ORTHO05D004703 2.0e-266 922.5 747 68.5
Nn4g22444 Nelumbo nucifera HOM05D003681 ORTHO05D004703 2.5e-266 922.2 748 68.7
RcHm_v2.0_Chr2g0174171 Rosa chinensis HOM05D003681 ORTHO05D004703 3.3e-266 921.8 741 69.1
CsaV3_3G027310 Cucumis sativus L. HOM05D003681 ORTHO05D004703 7.4e-266 920.6 736 69.2
Carub.0007s3474 Capsella rubella HOM05D003681 ORTHO05D004703 2.2e-265 919.1 748 68.4
Lj2g0006828 Lotus japonicus HOM05D003681 ORTHO05D004703 2.2e-265 919.1 738 69.5
vmacro05923 Vaccinium macrocarpon HOM05D003681 ORTHO05D004703 2.2e-265 919.1 728 70.2
CARHR213770 Cardamine hirsuta HOM05D003681 ORTHO05D004703 2.8e-265 918.7 748 68.2
AL7G49000 Arabidopsis lyrata HOM05D003681 ORTHO05D004703 6.3e-265 917.5 747 68.0
AT5G40740 Arabidopsis thaliana HOM05D003681 ORTHO05D004703 8.2e-265 917.1 747 68.1
BraA07t29742Z Brassica rapa HOM05D003681 ORTHO05D004703 5.3e-264 914.4 746 68.2
Sabra16G0218500 Salix brachista HOM05D003681 ORTHO05D004703 5.3e-264 914.4 737 69.2
BolC6t37131H Brassica oleracea HOM05D003681 ORTHO05D004703 6.9e-264 914.1 746 68.0
ClCG05G013220 Citrullus lanatus HOM05D003681 ORTHO05D004703 9.1e-264 913.7 737 69.1
vmacro18313 Vaccinium macrocarpon HOM05D003681 ORTHO05D004703 2.6e-263 912.1 740 68.9
A07p20510 Brassica napus HOM05D003681 ORTHO05D004703 1.0e-262 910.2 744 68.0
BcaB02g07929 Brassica carinata HOM05D003681 ORTHO05D004703 2.2e-262 909.1 744 67.7
BraA04t17035Z Brassica rapa HOM05D003681 ORTHO05D004703 2.9e-262 908.7 747 67.5
BolC4t26356H Brassica oleracea HOM05D003681 ORTHO05D004703 1.1e-261 906.7 747 67.3
PSO017G2495 Papaver somniferum HOM05D003681 ORTHO05D004703 1.1e-261 906.7 741 68.8
Aqoxy3G01435 Aquilegia oxysepala HOM05D003681 ORTHO05D004703 3.2e-261 905.2 750 68.1
C04p47540 Brassica napus HOM05D003681 ORTHO05D004703 7.2e-261 904.0 747 67.3
BcaC08g44481 Brassica carinata HOM05D003681 ORTHO05D004703 1.6e-260 902.9 744 67.5
A04p13760 Brassica napus HOM05D003681 ORTHO05D004703 1.6e-260 902.9 749 67.3
C06p19360 Brassica napus HOM05D003681 ORTHO05D004703 1.6e-260 902.9 744 67.5
arahy.Tifrunner.gnm1.ann1.0QF2GW Arachis hypogaea HOM05D003681 ORTHO05D004703 2.7e-260 902.1 736 68.6
COL.COLO4_29274 Corchorus olitorius HOM05D003681 ORTHO05D004703 3.6e-260 901.7 727 67.4
Sed0015235 Sechium edule HOM05D003681 ORTHO05D004703 6.1e-260 901.0 736 68.2
Hund06716 Selenicereus undatus HOM05D003681 ORTHO05D004703 6.1e-260 901.0 725 68.0
TAR371G0788 Trochodendron aralioides HOM05D003681 ORTHO05D004703 2.3e-259 899.0 747 67.1
Oeu058755.3 Olea europaea HOM05D003681 ORTHO05D004703 5.1e-259 897.9 779 65.6
FvH4_6g52640 Fragaria vesca HOM05D003681 ORTHO05D004703 1.1e-258 896.7 741 68.0
Sed0021158 Sechium edule HOM05D003681 ORTHO05D004703 2.0e-258 896.0 736 68.5
HanXRQChr07g0199161 Helianthus annuus HOM05D003681 ORTHO05D004703 3.3e-258 895.2 737 68.0
BcaB06g27549 Brassica carinata HOM05D003681 ORTHO05D004703 1.3e-257 893.3 732 67.2
CSS0007013 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 2.8e-257 892.1 697 70.9
Lalb_Chr02g0157941 Lupinus albus HOM05D003681 ORTHO05D004703 2.8e-257 892.1 736 66.6
FAN14G5093 Fragaria x ananassa HOM05D003681 ORTHO05D004703 2.4e-256 889.0 759 66.8
THA.LOC104805345 Tarenaya hassleriana HOM05D003681 ORTHO05D004703 2.4e-256 889.0 754 66.8
PSO478G5006 Papaver somniferum HOM05D003681 ORTHO05D004703 3.1e-256 888.6 736 68.5
Actinidia36165 Actinidia chinensis HOM05D003681 ORTHO05D004703 4.5e-255 884.8 726 68.0
FAN09G4630 Fragaria x ananassa HOM05D003681 ORTHO05D004703 5.0e-254 881.3 759 66.3
ECA238G4183 Erigeron canadensis HOM05D003681 ORTHO05D004703 6.5e-254 880.9 711 68.8
MBI11_g11079_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D004703 1.5e-253 879.8 755 65.6
Rhsim10G0011100 Rhododendron simsii HOM05D003681 ORTHO05D004703 4.2e-253 878.2 735 68.2
FAN02G4174 Fragaria x ananassa HOM05D003681 ORTHO05D004703 7.2e-253 877.5 741 67.2
Psat1g082400 Pisum sativum HOM05D003681 ORTHO05D004703 8.0e-252 874.0 736 66.4
EL10Ac4g08610 Beta vulgaris HOM05D003681 ORTHO05D004703 1.0e-251 873.6 727 65.7
FAN05G4404 Fragaria x ananassa HOM05D003681 ORTHO05D004703 4.4e-250 868.2 786 64.0
Sabra16G0218400 Salix brachista HOM05D003681 ORTHO05D004703 5.7e-250 867.8 720 68.1
Medtr6g022730 Medicago truncatula HOM05D003681 ORTHO05D004703 2.8e-249 865.5 740 66.4
SGA_v2.0_scaffold135G34941 Striga asiatica HOM05D003681 ORTHO05D004703 6.3e-249 864.4 771 64.9
AUR62036017 Chenopodium quinoa HOM05D003681 ORTHO05D004703 5.0e-246 854.7 723 65.1
Lalb_Chr21g0317601 Lupinus albus HOM05D003681 ORTHO05D004703 2.5e-245 852.4 736 64.8
Rhsim08G0046300 Rhododendron simsii HOM05D003681 ORTHO05D004703 6.1e-244 847.8 751 65.6
Sc03g0007020 Simmondsia chinensis HOM05D003681 ORTHO05D004703 7.5e-242 840.9 738 64.6
Ca_04403_v3 Cicer arietinum L. HOM05D003681 ORTHO05D004703 1.5e-237 826.6 717 65.1
AUR62035509 Chenopodium quinoa HOM05D003681 ORTHO05D004703 1.7e-233 813.1 709 64.7
Lsat_1_v5_gn_2_93641 Lactuca sativa HOM05D003681 ORTHO05D004703 6.3e-233 811.2 741 64.1
Lj1g0019639 Lotus japonicus HOM05D003681 ORTHO05D004703 2.8e-228 795.8 742 61.9
Os02g0329300 Oryza sativa ssp. japonica HOM05D003681 ORTHO05D004703 2.3e-219 766.1 734 60.9
TPR.G36528 Trifolium pratense HOM05D003681 ORTHO05D004703 6.4e-217 758.1 794 57.9
HPP92_006269 Vanilla planifolia HOM05D003681 ORTHO05D004703 1.9e-213 746.5 729 59.1
CDE07G0234 Ceratophyllum demersum HOM05D003681 ORTHO05D004703 7.3e-213 744.6 753 57.9
Gohir.A10G160600 Gossypium hirsutum HOM05D003681 ORTHO05D004703 4.0e-211 738.8 542 72.7
ATR0824G011 Amborella trichopoda HOM05D003681 ORTHO05D004703 2.0e-210 736.5 724 59.5
Zm00001eb235200 Zea mays HOM05D003681 ORTHO05D004703 1.6e-204 716.8 716 59.4
unitig_21.g20482 Utricularia gibba HOM05D003681 ORTHO05D004703 1.5e-194 683.7 759 55.1
TAR374G1355 Trochodendron aralioides HOM05D003681 ORTHO05D004703 4.2e-192 675.6 440 79.5
CDE04G2610 Ceratophyllum demersum HOM05D003681 ORTHO05D004703 1.7e-185 653.7 719 54.1
unitig_744.g24365 Utricularia gibba HOM05D003681 ORTHO05D004703 4.9e-185 652.1 643 59.7
DCAR_011289 Daucus carota HOM05D003681 ORTHO05D004703 8.4e-177 624.8 565 65.5
QL07p006188 Quercus lobata HOM05D003681 ORTHO05D004703 1.9e-152 543.9 372 75.8
Mapoly0032s0042 Marchantia polymorpha HOM05D003681 ORTHO05D004703 6.1e-135 485.7 737 43.3
SMO367G0854 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 3.5e-130 469.9 605 48.9
SHI03860 Sapria himalayana HOM05D003681 ORTHO05D004703 8.5e-129 465.3 429 60.8
Pp3c13_14720 Physcomitrium patens HOM05D003681 ORTHO05D004703 2.9e-121 440.3 755 42.6
Pp3c13_14730 Physcomitrium patens HOM05D003681 ORTHO05D004703 2.9e-121 440.3 755 42.6
QL09p045970 Quercus lobata HOM05D003681 ORTHO05D004703 7.2e-120 435.6 303 73.6
Pp3c4_18170 Physcomitrium patens HOM05D003681 ORTHO05D004703 2.1e-119 434.1 749 41.7
Pp3c3_25790 Physcomitrium patens HOM05D003681 ORTHO05D004703 7.5e-117 425.6 502 50.0
MELO3C014854.2 Cucumis melo HOM05D003681 ORTHO05D004703 4.7e-103 379.8 438 55.0
SEGI_13919 Sequoiadendron giganteum HOM05D003681 ORTHO05D004703 2.4e-99 367.5 374 56.4
SGA_v2.0_scaffold135G34947 Striga asiatica HOM05D003681 ORTHO05D004703 3.2e-91 340.5 258 71.7
Actinidia35791 Actinidia chinensis HOM05D003681 ORTHO05D004703 5.1e-89 333.2 295 65.4
CBR_g66670 Chara braunii HOM05D003681 ORTHO05D004703 5.2e-86 323.2 635 37.8
Nn3g16565 Nelumbo nucifera HOM05D003681 ORTHO05D004703 3.6e-79 300.4 182 84.1
RcHm_v2.0_Chr2g0109021 Rosa chinensis HOM05D002608 ORTHO05D004703 5.8e-77 293.1 259 61.0
MBI06_g35146_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D004703 2.1e-74 284.6 359 53.2
AagrBONN_evm.TU.Sc2ySwM_228.437 Anthoceros agrestis HOM05D003681 ORTHO05D004703 1.4e-67 261.9 315 47.9
SMO367G0212 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 5.8e-61 240.0 558 36.2
RcHm_v2.0_Chr5g0047251 Rosa chinensis HOM05D002608 ORTHO05D021346 2.9e-52 211.1 437 37.8
TAR629G3339 Trochodendron aralioides HOM05D003681 ORTHO05D030546 2.7e-50 204.5 620 30.3
SMO367G0417 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 1.1e-46 192.6 580 33.6
Lsat_1_v5_gn_3_79520 Lactuca sativa HOM05D003681 ORTHO05D004703 9.3e-43 179.5 248 48.4
RcHm_v2.0_Chr6g0248701 Rosa chinensis HOM05D002608 ORTHO05D013040 1.9e-35 155.2 99 76.8
SMO275G0043 Selaginella moellendorffii HOM05D003681 ORTHO05D030546 1.2e-34 152.5 131 64.1
DCAR_011288 Daucus carota HOM05D003681 ORTHO05D004703 8.2e-31 139.8 172 52.3
RcHm_v2.0_Chr5g0045391 Rosa chinensis HOM05D003681 ORTHO05D004703 1.1e-30 139.4 92 71.7
RcHm_v2.0_Chr2g0096321 Rosa chinensis HOM05D003681 ORTHO05D004703 4.1e-30 137.5 92 70.7
BcaC05g26953 Brassica carinata HOM05D003681 ORTHO05D024003 5.3e-30 137.1 72 87.5
C05p28020 Brassica napus HOM05D003681 ORTHO05D024003 5.3e-30 137.1 72 87.5
RcHm_v2.0_Chr2g0166591 Rosa chinensis HOM05D003681 ORTHO05D004703 1.0e-28 132.9 76 90.8
BolC5t31529H Brassica oleracea HOM05D003681 ORTHO05D024003 8.5e-28 129.8 72 86.1
Hma1.2p1_0026F.1_g016370 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 4.8e-23 114.0 224 38.8
SHI03859 Sapria himalayana HOM05D000105 ORTHO05D000023 1.1e-19 102.8 299 33.4
RcHm_v2.0_Chr6g0248711 Rosa chinensis HOM05D003681 ORTHO05D030546 1.5e-19 102.4 51 94.1
vmacro18312 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 7.2e-19 100.1 217 35.0
MBI02_g11376_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D024003 1.2e-18 99.4 60 76.7
Lsat_1_v5_gn_2_93681 Lactuca sativa HOM05D006130 ORTHO05D007491 4.7e-18 97.4 50 96.0
ECA247G3396 Erigeron canadensis HOM05D003681 ORTHO05D004703 1.5e-16 92.4 71 67.6
SEGI_03694 Sequoiadendron giganteum HOM05D003681 ORTHO05D024003 4.4e-16 90.9 60 68.3
Hma1.2p1_0006F.1_g004670 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 5.9e-13 80.5 235 31.1
SMO275G0001 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 5.9e-13 80.5 84 57.1
SMO367G0834 Selaginella moellendorffii HOM05D003681 ORTHO05D030546 5.0e-12 77.4 85 51.8
SEGI_23209 Sequoiadendron giganteum HOM05D003681 ORTHO05D004703 5.5e-11 73.9 270 31.5
CAN.G713.20 Capsicum annuum HOM05D000718 ORTHO05D007431 3.1e-06 58.2 86 43.0


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