Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 2.2e-91 339.0 171 100.0
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 5.9e-89 330.9 171 97.7
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 2.3e-85 318.9 171 94.2
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 3.1e-37 159.1 174 52.9
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 5.4e-34 148.3 178 48.9
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 7.1e-34 147.9 176 46.6
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 6.0e-33 144.8 175 45.7
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 7.8e-33 144.4 184 46.2
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 1.3e-32 143.7 181 46.4
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 6.6e-32 141.4 190 45.3
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.5e-31 140.2 188 45.7
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 1.9e-31 139.8 183 50.3
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 7.3e-31 137.9 180 48.9
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 9.6e-31 137.5 191 45.5
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 1.3e-30 137.1 181 44.8
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 1.6e-30 136.7 175 46.3
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 3.6e-30 135.6 166 47.0
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 3.6e-30 135.6 162 47.5
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 8.1e-30 134.4 184 45.1
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 5.3e-29 131.7 172 43.6
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.5e-28 130.2 174 44.8
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 2.6e-28 129.4 166 47.0
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 7.6e-28 127.9 181 42.5
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 9.9e-28 127.5 177 43.5
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 2.9e-27 125.9 175 43.4
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 4.9e-27 125.2 161 44.7
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 4.9e-27 125.2 175 42.3
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 4.9e-27 125.2 175 42.3
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 6.4e-27 124.8 182 39.6
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 8.4e-27 124.4 177 40.7
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 1.1e-26 124.0 174 45.4
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.4e-26 123.6 173 42.8
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 2.4e-26 122.9 179 40.2
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 3.2e-26 122.5 181 40.9
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 4.2e-26 122.1 182 43.4
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 5.4e-26 121.7 175 45.1
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 7.1e-26 121.3 188 41.5
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 9.3e-26 120.9 177 40.7
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 9.3e-26 120.9 176 44.3
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 9.3e-26 120.9 183 39.9
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 1.2e-25 120.6 175 45.1
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 2.1e-25 119.8 172 43.6
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 2.7e-25 119.4 187 42.8
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 3.5e-25 119.0 197 38.6
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 4.6e-25 118.6 166 45.2
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 7.9e-25 117.9 176 39.8
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 1.0e-24 117.5 177 40.7
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 1.8e-24 116.7 183 39.9
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 3.0e-24 115.9 181 39.2
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 3.0e-24 115.9 181 38.7
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 3.9e-24 115.5 185 41.6
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 3.9e-24 115.5 172 40.7
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 5.1e-24 115.2 198 39.4
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 1.1e-23 114.0 185 40.5
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 1.1e-23 114.0 171 42.1
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 1.5e-23 113.6 185 43.2
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 1.5e-23 113.6 190 37.4
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 1.5e-23 113.6 168 44.0
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 2.5e-23 112.8 174 38.5
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 2.5e-23 112.8 179 38.5
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 2.5e-23 112.8 170 40.6
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 4.3e-23 112.1 174 38.5
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 5.6e-23 111.7 168 41.1
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 7.4e-23 111.3 173 42.8
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 7.4e-23 111.3 180 38.3
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 1.3e-22 110.5 161 42.2
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 1.3e-22 110.5 174 42.5
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 1.6e-22 110.2 159 40.3
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 2.1e-22 109.8 172 39.0
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 2.1e-22 109.8 172 39.0
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 2.1e-22 109.8 170 38.2
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 2.1e-22 109.8 175 38.3
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 2.8e-22 109.4 175 40.0
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 6.2e-22 108.2 182 37.9
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 8.1e-22 107.8 183 37.2
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 1.1e-21 107.5 182 40.1
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 1.4e-21 107.1 168 43.5
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 1.4e-21 107.1 161 41.6
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 1.8e-21 106.7 176 37.5
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 3.1e-21 105.9 182 39.6
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 4.0e-21 105.5 182 39.6
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 9.0e-21 104.4 182 36.8
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 1.2e-20 104.0 169 41.4
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 1.2e-20 104.0 175 38.9
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 1.5e-20 103.6 192 32.8
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 1.5e-20 103.6 179 35.8
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.5e-20 103.6 180 38.9
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 4.5e-20 102.1 180 36.1
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 4.5e-20 102.1 178 34.8
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 4.5e-20 102.1 178 34.8
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 7.6e-20 101.3 180 35.6
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 7.6e-20 101.3 174 37.9
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 1.0e-19 100.9 179 38.0
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 1.3e-19 100.5 193 33.7
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 1.7e-19 100.1 195 34.9
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 2.9e-19 99.4 179 37.4
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 2.9e-19 99.4 175 33.1
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 4.9e-19 98.6 176 36.4
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 8.4e-19 97.8 175 36.6
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 7.1e-18 94.7 175 35.4
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 1.6e-17 93.6 165 39.4
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 2.7e-17 92.8 180 36.7
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 4.6e-17 92.0 165 37.0
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 7.9e-17 91.3 135 41.5
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 1.0e-16 90.9 176 34.7
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 1.3e-16 90.5 162 36.4
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 2.3e-16 89.7 176 35.8
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 3.9e-16 89.0 167 38.3
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 6.7e-16 88.2 175 32.6
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 8.7e-16 87.8 162 35.2
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 1.5e-15 87.0 210 31.9
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 2.5e-15 86.3 182 33.5
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 2.5e-15 86.3 210 32.9
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 3.3e-15 85.9 176 37.5
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 5.7e-15 85.1 205 32.7
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 2.1e-14 83.2 154 37.7
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 3.7e-14 82.4 178 34.3
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 8.2e-14 81.3 181 34.3
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 1.4e-13 80.5 182 34.1
Dinv25725 Davidia involucrata HOM05D005478 ORTHO05D006426 5.8e-12 75.1 130 40.8
Lju41C43G9 Lonicera japonica HOM05D005478 ORTHO05D006426 7.6e-12 74.7 112 40.2
Zm00001eb183740 Zea mays HOM05D044595 ORTHO05D006426 3.8e-11 72.4 164 28.7
Nitab4.5_0005593g0050 Nicotiana tabacum HOM05D005478 ORTHO05D006426 5.0e-11 72.0 149 38.3
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 8.4e-11 71.2 94 40.4
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 2.5e-10 69.7 155 36.1
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.2e-09 67.4 49 67.3
Os02g0595300 Oryza sativa ssp. japonica HOM05D005478 ORTHO05D006426 1.3e-08 63.9 193 28.5
Nn3g16214 Nelumbo nucifera HOM05D005478 ORTHO05D006426 1.8e-08 63.5 78 42.3
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 2.3e-08 63.2 55 60.0
EL10Ac6g14100 Beta vulgaris HOM05D005478 ORTHO05D006426 2.5e-07 59.7 95 41.1
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 5.7e-07 58.5 48 58.3
Oeu018990.1 Olea europaea HOM05D005478 ORTHO05D006426 4.8e-06 55.5 86 37.2


User provided reference genes

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