Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g037990 Solanum pennellii HOM05D009004 ORTHO05D011183 0.0e+00 1280.4 673 100.0
Solyc02g093400.3 Solanum lycopersicum HOM05D009004 ORTHO05D011183 0.0e+00 1136.3 666 91.4
Nitab4.5_0001860g0070 Nicotiana tabacum HOM05D009004 ORTHO05D011183 1.2e-217 760.4 640 68.1
Peaxi162Scf00129g01674 Petunia axillaris HOM05D009004 ORTHO05D011183 4.0e-205 718.8 650 63.2
Dinv33432 Davidia involucrata HOM05D009004 ORTHO05D011183 1.1e-175 620.9 661 54.6
Nitab4.5_0003318g0020 Nicotiana tabacum HOM05D009004 ORTHO05D011183 7.9e-153 545.0 538 59.9
PGSC0003DMG400012634 Solanum tuberosum HOM05D009004 ORTHO05D011183 2.0e-140 503.8 574 55.9
Aqoxy3G01224 Aquilegia oxysepala HOM05D009004 ORTHO05D011183 1.2e-137 494.6 528 51.1
SalBow7G2965 Salvia bowleyana HOM05D009004 ORTHO05D011183 1.1e-125 454.9 599 47.7
TAR629G3190 Trochodendron aralioides HOM05D009004 ORTHO05D011183 2.0e-119 434.1 450 53.3
Actinidia05986 Actinidia chinensis HOM05D009004 ORTHO05D011183 1.8e-96 357.8 323 58.2
MBI06_g16057_MAGBIO Magnolia biondii HOM05D009004 ORTHO05D011183 3.1e-93 347.1 430 47.2
Mapoly0069s0065 Marchantia polymorpha HOM05D009004 ORTHO05D011183 5.4e-93 346.3 548 38.7
Nn4g22605 Nelumbo nucifera HOM05D009004 ORTHO05D011183 6.1e-89 332.8 359 49.9
Oeu018144.1 Olea europaea HOM05D009004 ORTHO05D011183 2.0e-87 327.8 383 51.2
Pp3c21_270 Physcomitrium patens HOM05D009004 ORTHO05D011183 2.4e-77 294.3 484 37.4
Hma1.2p1_2550F.1_g324210 Hydrangea macrophylla HOM05D009004 ORTHO05D011183 4.4e-71 273.5 463 40.6
GSVIVG01032390001 Vitis vinifera HOM05D009004 ORTHO05D011183 2.2e-70 271.2 253 59.7
Lju41A42G103 Lonicera japonica HOM05D009004 ORTHO05D011183 1.0e-59 235.7 404 39.9
PRCOL_00004616 Prasinoderma coloniale HOM05D009004 ORTHO05D011183 6.6e-51 206.5 560 29.8
CSS0046326 Camellia sinensis var. sinensis HOM05D009004 ORTHO05D011183 3.3e-50 204.1 214 52.8
Migut.K01405 Erythranthe guttata HOM05D009004 ORTHO05D011183 5.2e-48 196.8 181 59.1
SEGI_28903 Sequoiadendron giganteum HOM05D009004 ORTHO05D011183 1.6e-44 185.3 233 45.5
CBR_g41471 Chara braunii HOM05D000019 ORTHO05D000353 5.6e-42 176.8 271 37.6
Nn4g22604 Nelumbo nucifera HOM05D009004 ORTHO05D011183 3.6e-41 174.1 190 48.9
CSS0016615 Camellia sinensis var. sinensis HOM05D009004 ORTHO05D011183 6.9e-40 169.9 214 46.7
TAR629G3026 Trochodendron aralioides HOM05D009004 ORTHO05D011183 8.4e-30 136.3 235 40.0
Hma1.2p1_1747F.1_g300490 Hydrangea macrophylla HOM05D009004 ORTHO05D011183 7.4e-26 123.2 91 63.7
Migut.K01406 Erythranthe guttata HOM05D009004 ORTHO05D011183 3.4e-23 114.4 140 45.7
SEGI_40212 Sequoiadendron giganteum HOM05D009004 ORTHO05D011183 3.4e-23 114.4 145 41.4
CSS0033348 Camellia sinensis var. sinensis HOM05D025570 ORTHO05D028378 1.3e-22 112.5 210 41.4
CBR_g41472 Chara braunii HOM05D009004 ORTHO05D011183 4.2e-21 107.5 177 42.9
SMO361G0427 Selaginella moellendorffii HOM05D016657 ORTHO05D011183 3.0e-19 101.3 120 48.3
CSS0048669 Camellia sinensis var. sinensis HOM05D025570 ORTHO05D028378 2.6e-15 88.2 210 37.6
SEGI_18176 Sequoiadendron giganteum HOM05D009004 ORTHO05D011183 1.9e-10 72.0 51 64.7
CSS0021754 Camellia sinensis var. sinensis HOM05D009004 ORTHO05D024691 7.4e-10 70.1 140 34.3
CSS0024581 Camellia sinensis var. sinensis HOM05D009004 ORTHO05D024691 7.4e-10 70.1 140 34.3
CSS0044937 Camellia sinensis var. sinensis HOM05D009004 ORTHO05D024691 1.1e-08 66.2 140 32.1
CSS0036337 Camellia sinensis var. sinensis HOM05D009004 ORTHO05D024691 1.2e-07 62.8 140 32.9
SMO361G0299 Selaginella moellendorffii HOM05D016657 ORTHO05D011183 1.0e-06 59.7 46 63.0


User provided reference genes

Program Settings