Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g036680 Solanum pennellii HOM05D016189 ORTHO05D009199 3.2e-62 241.5 116 100.0
Solyc02g092100.1 Solanum lycopersicum HOM05D016189 ORTHO05D009199 2.7e-61 238.4 116 98.3
PGSC0003DMG400021432 Solanum tuberosum HOM05D016189 ORTHO05D009199 5.1e-36 154.5 94 81.9
Nitab4.5_0001072g0010 Nicotiana tabacum HOM05D016189 ORTHO05D009199 1.9e-30 136.0 102 65.7
Peaxi162Scf00548g00006 Petunia axillaris HOM05D016189 ORTHO05D009199 1.1e-25 120.2 104 64.4
Nitab4.5_0000142g0360 Nicotiana tabacum HOM05D016189 ORTHO05D009199 2.2e-23 112.5 93 65.6
Hma1.2p1_0424F.1_g150510 Hydrangea macrophylla HOM05D016189 ORTHO05D009199 1.3e-10 70.1 63 55.6
Manes.13G109500 Manihot esculenta HOM05D007433 ORTHO05D009199 3.5e-08 62.0 68 51.5
Potri.014G007000 Populus trichocarpa HOM05D007433 ORTHO05D009199 3.5e-08 62.0 66 48.5
Atru.chr3.1055 Acer truncatum HOM05D007433 ORTHO05D009199 1.0e-07 60.5 71 43.7
Peaxi162Scf00340g00061 Petunia axillaris HOM05D007433 ORTHO05D009199 1.0e-07 60.5 101 38.6
Dinv26956 Davidia involucrata HOM05D000754 ORTHO05D000169 1.7e-07 59.7 39 71.8
COL.COLO4_11609 Corchorus olitorius HOM05D007433 ORTHO05D009199 2.9e-07 58.9 37 67.6
Thecc.01G075800 Theobroma cacao HOM05D007433 ORTHO05D009199 5.0e-07 58.2 37 67.6
Gohir.A02G150000 Gossypium hirsutum HOM05D007433 ORTHO05D009199 6.6e-07 57.8 71 43.7
Gohir.D03G030400 Gossypium hirsutum HOM05D007433 ORTHO05D009199 1.9e-06 56.2 67 44.8
Gorai.003G032000 Gossypium raimondii HOM05D007433 ORTHO05D009199 1.9e-06 56.2 67 44.8
Dinv44935 Davidia involucrata HOM05D007433 ORTHO05D009199 3.3e-06 55.5 64 46.9
SalBow3G4039 Salvia bowleyana HOM05D007433 ORTHO05D009199 4.2e-06 55.1 73 42.5
Hma1.2p1_1170F.1_g263410 Hydrangea macrophylla HOM05D007433 ORTHO05D009199 5.5e-06 54.7 68 45.6
Lalb_Chr08g0245211 Lupinus albus HOM05D007433 ORTHO05D009199 5.5e-06 54.7 77 40.3
Cpa.g.sc142.56 Carica papaya HOM05D007433 ORTHO05D009199 7.2e-06 54.3 65 44.6
Eucgr.F00094 Eucalyptus grandis HOM05D007433 ORTHO05D009199 7.2e-06 54.3 65 47.7
QL06p038982 Quercus lobata HOM05D007433 ORTHO05D009199 7.2e-06 54.3 61 44.3
Rhsim08G0090900 Rhododendron simsii HOM05D016189 ORTHO05D009199 7.2e-06 54.3 64 42.2
Actinidia19585 Actinidia chinensis HOM05D002375 ORTHO05D002457 9.5e-06 53.9 93 35.5
Manes.18G048800 Manihot esculenta HOM05D007433 ORTHO05D009199 9.5e-06 53.9 45 60.0


User provided reference genes

Program Settings