Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 7.4e-57 224.2 163 100.0
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 1.2e-54 216.9 163 98.2
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 1.0e-50 203.8 163 91.4
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 1.2e-43 180.3 163 81.6
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 8.0e-43 177.6 163 80.4
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 3.8e-37 158.7 163 70.6
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 1.8e-34 149.8 132 89.4
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 5.7e-33 144.8 150 77.3
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 1.0e-29 134.0 165 66.1
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 2.8e-24 115.9 163 62.0
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 4.9e-24 115.2 163 65.0
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 1.6e-22 110.2 155 65.8
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 1.6e-22 110.2 168 64.9
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 2.0e-22 109.8 127 70.9
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 2.7e-22 109.4 170 64.1
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 3.5e-22 109.0 172 61.6
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 3.5e-22 109.0 172 61.6
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 7.8e-22 107.8 165 63.0
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 7.8e-22 107.8 133 69.2
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 7.8e-22 107.8 168 63.7
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 1.7e-21 106.7 162 63.0
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 2.9e-21 105.9 164 64.0
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 3.9e-21 105.5 128 73.4
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 3.9e-21 105.5 128 73.4
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 3.9e-21 105.5 168 56.5
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 5.0e-21 105.1 171 63.2
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 5.0e-21 105.1 150 66.7
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 8.6e-21 104.4 164 65.2
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 2.5e-20 102.8 128 64.1
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 2.5e-20 102.8 132 60.6
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 4.3e-20 102.1 169 60.4
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 4.3e-20 102.1 132 62.9
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 4.3e-20 102.1 163 61.3
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 4.3e-20 102.1 157 65.0
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 9.5e-20 100.9 171 62.6
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 1.2e-19 100.5 139 71.2
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 2.1e-19 99.8 147 68.0
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 4.7e-19 98.6 139 65.5
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 4.7e-19 98.6 147 67.3
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 6.1e-19 98.2 136 64.7
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 8.0e-19 97.8 169 58.6
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 1.4e-18 97.1 139 66.9
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 1.8e-18 96.7 141 69.5
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 1.8e-18 96.7 169 54.4
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 2.3e-18 96.3 141 69.5
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 2.3e-18 96.3 125 63.2
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 3.1e-18 95.9 168 63.1
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 5.2e-18 95.1 156 61.5
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 5.2e-18 95.1 156 61.5
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 6.8e-18 94.7 139 66.2
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 8.9e-18 94.4 156 63.5
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 1.2e-17 94.0 156 62.8
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 1.2e-17 94.0 165 63.0
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 1.2e-17 94.0 170 61.2
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 1.5e-17 93.6 151 60.3
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 2.0e-17 93.2 162 53.1
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 2.6e-17 92.8 156 60.9
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 3.4e-17 92.4 161 62.1
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 3.4e-17 92.4 159 51.6
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 4.4e-17 92.0 128 71.9
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 4.4e-17 92.0 138 60.1
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 5.8e-17 91.7 122 73.8
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 9.8e-17 90.9 153 62.1
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 1.3e-16 90.5 169 54.4
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 1.3e-16 90.5 215 50.2
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 1.7e-16 90.1 156 57.1
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.7e-16 90.1 138 65.2
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 1.7e-16 90.1 151 62.3
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 1.7e-16 90.1 164 61.6
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 2.2e-16 89.7 166 61.4
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 2.2e-16 89.7 150 66.7
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 2.9e-16 89.4 138 61.6
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 2.9e-16 89.4 138 61.6
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 2.9e-16 89.4 130 66.2
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 3.7e-16 89.0 171 53.2
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 4.9e-16 88.6 141 62.4
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 4.9e-16 88.6 134 65.7
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 6.4e-16 88.2 166 60.8
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 6.4e-16 88.2 138 60.9
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 8.3e-16 87.8 132 68.2
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 8.3e-16 87.8 132 68.2
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 1.1e-15 87.4 128 60.9
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.4e-15 87.0 123 61.0
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 2.4e-15 86.3 123 66.7
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 7.0e-15 84.7 147 57.8
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 9.2e-15 84.3 132 67.4
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 2.7e-14 82.8 152 48.7
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 2.7e-14 82.8 138 64.5
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 4.6e-14 82.0 162 45.7
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 7.8e-14 81.3 135 43.7
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 5.0e-13 78.6 109 71.6
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 1.2e-11 73.9 142 60.6
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.6e-11 73.6 102 70.6
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 4.7e-11 72.0 171 54.4
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 1.4e-10 70.5 115 64.3
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 8.9e-10 67.8 154 43.5
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 3.4e-09 65.9 171 44.4
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 1.3e-08 63.9 160 52.5
unitig_21.g20937 Utricularia gibba HOM05D000261 ORTHO05D001168 1.3e-08 63.9 130 55.4
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 3.2e-07 59.3 125 46.4


User provided reference genes

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