Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 8.9e-103 377.1 212 100.0
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 1.8e-95 352.8 180 96.7
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 1.1e-92 343.6 172 98.8
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 8.7e-90 334.0 180 91.1
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 1.1e-89 333.6 180 90.0
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 1.1e-73 280.4 177 76.3
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 2.5e-73 279.3 176 76.1
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 1.6e-72 276.6 177 75.7
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 6.2e-72 274.6 178 74.2
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.1e-71 273.9 180 70.6
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 2.6e-70 269.2 175 74.9
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 3.4e-70 268.9 174 76.4
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 5.8e-70 268.1 176 71.0
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 5.8e-70 268.1 176 73.9
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 5.8e-70 268.1 177 75.1
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 7.6e-70 267.7 177 73.4
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 7.6e-70 267.7 171 76.6
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 1.7e-69 266.5 184 70.7
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 4.9e-69 265.0 172 75.6
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 8.4e-69 264.2 175 76.6
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 1.1e-68 263.8 175 73.7
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 1.9e-68 263.1 175 73.1
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 2.5e-68 262.7 175 73.1
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 2.5e-68 262.7 180 70.6
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 3.2e-68 262.3 179 70.4
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 3.2e-68 262.3 168 76.2
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 3.2e-68 262.3 175 76.0
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 4.2e-68 261.9 178 70.8
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 5.5e-68 261.5 175 74.3
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 9.3e-68 260.8 180 72.2
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 1.2e-67 260.4 184 72.3
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 1.6e-67 260.0 174 71.3
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 3.5e-67 258.8 182 72.0
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 3.5e-67 258.8 172 71.5
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 4.6e-67 258.5 173 72.3
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 1.8e-66 256.5 172 71.5
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 3.0e-66 255.8 173 71.7
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 3.0e-66 255.8 177 71.2
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 3.9e-66 255.4 186 70.4
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 5.1e-66 255.0 184 68.5
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 6.7e-66 254.6 178 70.2
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 1.1e-65 253.8 186 69.9
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 1.1e-65 253.8 178 69.1
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 1.1e-65 253.8 174 71.3
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 7.4e-65 251.1 178 69.7
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 1.3e-64 250.4 171 71.3
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 4.1e-63 245.4 180 68.3
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 4.1e-63 245.4 139 79.9
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 6.9e-63 244.6 171 70.2
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 6.9e-63 244.6 172 70.9
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 6.9e-63 244.6 171 70.8
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 6.9e-63 244.6 171 70.8
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 6.9e-63 244.6 171 70.8
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 6.9e-63 244.6 171 70.8
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 6.9e-63 244.6 171 70.8
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 1.2e-62 243.8 171 69.6
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 1.2e-62 243.8 176 68.8
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 1.5e-62 243.4 171 68.4
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 2.0e-62 243.0 171 69.0
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 2.0e-62 243.0 157 74.5
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 3.4e-62 242.3 169 66.9
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 4.5e-62 241.9 171 69.0
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 7.6e-62 241.1 177 66.7
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 7.6e-62 241.1 171 69.6
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 7.6e-62 241.1 176 68.2
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 1.7e-61 240.0 176 67.6
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 3.8e-61 238.8 175 66.9
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 5.0e-61 238.4 168 66.7
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 5.0e-61 238.4 174 69.0
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 1.4e-60 236.9 172 68.6
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 1.9e-60 236.5 136 80.9
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 9.3e-60 234.2 178 64.0
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 1.6e-59 233.4 176 65.3
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 2.7e-59 232.6 198 66.2
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 1.0e-58 230.7 142 75.4
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 1.3e-58 230.3 169 63.9
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 1.8e-58 229.9 135 80.0
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 8.7e-58 227.6 169 64.5
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 8.7e-58 227.6 169 64.5
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 1.5e-57 226.9 179 63.1
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 7.4e-57 224.6 162 64.8
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 7.4e-57 224.6 155 69.7
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 1.6e-56 223.4 157 71.3
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 1.6e-56 223.4 174 63.8
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 1.4e-55 220.3 157 66.2
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 1.4e-55 220.3 201 58.2
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.5e-54 216.9 184 59.2
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 1.7e-53 213.4 199 57.8
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 8.5e-53 211.1 133 72.2
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.4e-52 210.3 178 61.2
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 2.7e-51 206.1 164 65.2
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 1.7e-48 196.8 149 66.4
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 2.6e-46 189.5 113 71.7
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 7.2e-44 181.4 186 52.2
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 2.1e-43 179.9 179 53.6
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.4e-42 177.2 145 61.4
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 5.3e-39 165.2 142 59.9
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 3.8e-37 159.1 163 49.7
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 7.2e-36 154.8 146 51.4
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 3.0e-34 149.4 85 77.6
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 1.7e-29 133.7 153 45.1
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 2.3e-26 123.2 64 79.7
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 1.5e-25 120.6 83 67.5
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 4.1e-23 112.5 91 68.1
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.6e-19 100.5 111 53.2
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 2.2e-16 90.1 54 74.1
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 6.3e-16 88.6 175 34.9
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 4.1e-15 85.9 83 57.8
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 1.6e-14 84.0 62 61.3
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 2.0e-14 83.6 92 53.3
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.8e-10 70.5 39 74.4
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 5.4e-07 58.9 94 34.0
Peaxi162Scf00166g00037 Petunia axillaris HOM05D007258 ORTHO05D008852 9.2e-07 58.2 41 73.2


User provided reference genes

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