Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 9.4e-242 839.7 411 100.0
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 8.3e-238 826.6 411 98.3
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 8.3e-230 800.0 411 95.1
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 4.0e-208 728.0 414 86.5
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 1.7e-206 722.6 413 86.7
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 4.1e-205 718.0 407 86.5
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 8.7e-171 604.0 411 75.4
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 5.0e-158 561.6 415 67.0
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 4.2e-157 558.5 379 72.0
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 3.0e-155 552.4 416 67.1
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 5.7e-154 548.1 362 71.8
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 6.5e-150 534.6 366 69.9
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 1.1e-149 533.9 411 65.0
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 5.5e-149 531.6 378 69.0
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 6.1e-148 528.1 368 71.2
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 1.4e-147 526.9 378 69.0
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 1.8e-147 526.6 413 63.9
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 2.3e-147 526.2 345 71.6
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 6.7e-147 524.6 376 67.8
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 6.7e-147 524.6 376 67.6
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 1.1e-146 523.9 412 63.1
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 2.0e-146 523.1 371 67.1
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 2.0e-146 523.1 358 68.2
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 1.7e-145 520.0 344 71.2
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 3.7e-145 518.8 413 61.7
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 6.3e-145 518.1 359 68.8
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 2.4e-144 516.2 379 66.0
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 3.1e-144 515.8 352 70.2
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 6.9e-144 514.6 351 70.7
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 1.2e-143 513.8 395 63.3
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 2.0e-143 513.1 367 68.7
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 5.9e-143 511.5 356 68.5
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 7.7e-143 511.1 417 61.2
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 7.7e-143 511.1 371 66.6
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 7.7e-143 511.1 371 66.6
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 1.0e-142 510.8 371 66.6
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 1.3e-142 510.4 394 64.2
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 1.7e-142 510.0 388 63.9
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 2.9e-142 509.2 344 69.8
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 2.9e-142 509.2 342 70.5
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 1.4e-141 506.9 427 61.6
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 5.5e-141 505.0 345 69.6
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 1.2e-140 503.8 364 67.6
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 1.6e-140 503.4 346 69.1
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 1.6e-140 503.4 340 70.9
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 1.6e-140 503.4 309 77.0
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 1.6e-140 503.4 345 68.1
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 2.1e-140 503.1 394 61.7
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 3.6e-140 502.3 342 70.5
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 6.1e-140 501.5 431 61.3
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 7.9e-140 501.1 340 68.5
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 1.0e-139 500.7 342 70.2
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 1.8e-139 500.0 423 60.3
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 3.0e-139 499.2 382 64.4
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 3.0e-139 499.2 343 67.6
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 3.9e-139 498.8 356 67.4
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 3.9e-139 498.8 377 62.9
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 5.1e-139 498.4 377 62.9
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 6.7e-139 498.0 390 63.1
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 6.7e-139 498.0 390 63.1
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 1.1e-138 497.3 356 67.4
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 1.1e-138 497.3 405 60.2
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 3.3e-138 495.7 340 67.6
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 3.3e-138 495.7 342 69.3
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 4.4e-138 495.4 369 64.2
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 9.7e-138 494.2 356 64.6
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 2.8e-137 492.7 422 59.5
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 8.2e-137 491.1 411 62.0
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 1.4e-136 490.3 342 68.1
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 1.8e-136 490.0 392 62.5
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 2.4e-136 489.6 374 65.0
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 3.1e-136 489.2 347 68.0
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 2.6e-135 486.1 356 65.4
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 3.5e-135 485.7 371 64.2
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 3.5e-135 485.7 371 64.2
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 1.7e-134 483.4 377 62.6
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 5.0e-134 481.9 372 63.2
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 1.1e-133 480.7 372 62.9
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 1.5e-133 480.3 407 58.2
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 1.9e-133 479.9 317 70.0
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 2.5e-133 479.6 368 64.1
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 7.2e-133 478.0 375 61.6
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 9.4e-133 477.6 340 66.8
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 1.4e-131 473.8 348 64.4
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 1.8e-131 473.4 346 68.8
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 5.2e-131 471.9 341 65.4
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 2.6e-130 469.5 340 65.9
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 3.3e-130 469.2 321 69.2
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 1.7e-129 466.8 368 62.5
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 8.0e-124 448.0 341 61.3
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 2.3e-123 446.4 346 62.7
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 3.4e-122 442.6 373 60.3
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 1.1e-117 427.6 296 68.6
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 8.0e-116 421.4 415 55.4
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 4.1e-112 409.1 282 70.6
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 4.1e-112 409.1 346 57.8
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 4.9e-105 385.6 256 71.9
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 4.9e-105 385.6 341 54.8
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 4.1e-104 382.5 248 71.8
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 8.6e-102 374.8 316 61.7
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 3.1e-99 366.3 248 69.0
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 3.7e-97 359.4 318 58.5
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 2.3e-94 350.1 271 65.3
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 6.4e-89 332.0 364 48.1
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 2.1e-84 317.0 347 47.6
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 1.7e-81 307.4 239 62.3
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 2.9e-81 306.6 360 43.6
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 7.3e-69 265.4 342 42.1
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 2.4e-59 233.8 184 60.9
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 2.6e-42 177.2 190 46.8
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 1.3e-38 164.9 125 61.6
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 1.3e-36 158.3 159 54.1
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.8e-36 157.1 159 51.6
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 6.9e-35 152.5 91 73.6
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 3.4e-34 150.2 112 63.4
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.4e-27 128.3 93 61.3
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 7.0e-19 99.4 85 57.6
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 2.3e-14 84.3 93 48.4
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 4.0e-14 83.6 53 67.9


User provided reference genes

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